KEGG   Leishmania braziliensis: LBRM_30_3480
Entry
LBRM_30_3480      CDS       T01113                                 
Name
(RefSeq) putative DNA ligase I
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
lbz  Leishmania braziliensis
Pathway
lbz03030  DNA replication
lbz03410  Base excision repair
lbz03420  Nucleotide excision repair
lbz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lbz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LBRM_30_3480
   03410 Base excision repair
    LBRM_30_3480
   03420 Nucleotide excision repair
    LBRM_30_3480
   03430 Mismatch repair
    LBRM_30_3480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lbz03032]
    LBRM_30_3480
   03400 DNA repair and recombination proteins [BR:lbz03400]
    LBRM_30_3480
Enzymes [BR:lbz01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     LBRM_30_3480
    6.5.1.6  DNA ligase (ATP or NAD+)
     LBRM_30_3480
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     LBRM_30_3480
DNA replication proteins [BR:lbz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    LBRM_30_3480
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     LBRM_30_3480
DNA repair and recombination proteins [BR:lbz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     LBRM_30_3480
   NER (nucleotide excision repair)
    Other NER factors
     LBRM_30_3480
   MMR (mismatch excision repair)
    Other MMR factors
     LBRM_30_3480
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 5417873
NCBI-ProteinID: XP_001566972
UniProt: A4HIT2
LinkDB
Position
30:1237060..1239390
AA seq 776 aa
MHQTTLDRLFVPVASVGVSNEADNSRKATKKVTTASNREDRKRPREEEKVASQCVSSTPT
LDTATGRRTRWNEPTNAYYAQHVAEYKALIANVPPPTATSMAKLFQESTFDPVTTFESVW
LPPRAPAALPTAGALEPVPFAVVVDVLADISATGSRLECLKQLTFLLLAVIERCPEDLVP
VMYLVINKHAPQHEGVELGIGDAVLVKAVAECCGMTESRAKEEYRQSGDLAEIAQMHKQK
QSTLMKPKALSARSVFKSYREIAMMSGKDVVRRRSDLIKGLLRDAQGPEVNLIVRGLQQK
MRIGLAEPSALAAVGYAFALHFVGSAQMHTMSEVQLQTLLNSGADSLARIFYEVPSLDVV
LSAVLASGFMILVPGSCIAKVHAKELSIRPGLPVKPQLAHPTSGITVILDRLQGKKFTSE
YKYDGERAQIHYSEDNGFHIFSRNSETHTGKYPDVIAILPNTFDAAEVQSFIIDAEVVAV
HPETGALQAFQVLQHRGRKNIAEKDVSISVCLFVFDLLYLNGEPQLNKTLQQRRELLWRY
IRPLPAKLCFAAYLDSDDVEDVQKFLEKSIADGCEGLMVKTLEEEATYTPAKRSHYWLKL
KKDYMDGVTDTLDLVPIAAFYGKGKRTGVFGGFLLACYDPKADEYQSICKIGTGFQDEEL
EKLTQSLKPFVVHDKPRYYRAGGEEPDVWLTEAQVWEVKAADLSVSPVHQAAVGLVDPNK
GIALRFPRYVRQREDKNPVDATNTQQVAEMYKAQSLAVQHDASGDAEWAVTRTETP
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgcatcaaaccaccctcgaccgcctctttgtgcctgtggcctcggtgggtgtgtcgaac
gaggccgacaattcgcgtaaggcaacgaaaaaggtaactaccgcttcaaatcgagaagat
cgaaagcggccccgcgaggaggaaaaggtggcgagtcaatgcgtatcaagcactccgacc
ttagacaccgccactggtcggcggacaaggtggaatgaaccgacgaatgcctactatgca
caacacgttgcggagtacaaggcgctgatcgccaatgtgccgccgcccacggcgacgtcc
atggcgaagctcttccaggagtccaccttcgatcctgtgacgacattcgagtcagtgtgg
ctgcctccccgggctcctgccgcgctgccgaccgctggtgcattggagccggtgccgttt
gcagtagtagtcgacgtactggcagatattagcgccaccggctcgcggcttgagtgctta
aagcagctcacctttttgcttctcgccgtaatcgaacgatgcccagaggatttggtgccg
gtgatgtacctggtgatcaacaagcacgcaccgcagcacgaaggcgtggagctaggcatt
ggggatgcggtactggtgaaggcggtagctgagtgctgcggcatgacggaatcccgcgcc
aaagaagagtaccgtcaaagcggcgatttggcagaaatcgcgcagatgcacaagcagaag
caaagcacactgatgaagccgaaggcgctctccgcgcggagcgtgttcaagtcgtacagg
gagatcgcgatgatgagcggcaaggatgtggtgcggcggcggtcagacttgatcaagggg
ctgctgcgtgacgcacaggggccggaggtgaacctgattgtgcgcgggctgcagcagaaa
atgcgcatcggccttgccgagccgtccgccttggcagccgtcgggtacgcctttgctctt
cacttcgtcggtagcgcgcaaatgcacaccatgagtgaggtgcagctccagacgctgctg
aactccggggccgacagcctcgctcgtatcttctacgaggtgccgagtctagacgtggtg
ctgagcgcggtcctagcgagcggcttcatgattttggtgcccggtagctgcatcgcgaaa
gtgcacgccaaggagctgtcgattcggcctgggctgccggtgaagcctcagctggcgcac
ccgacaagcggcatcaccgtcatcctggaccgtctgcaaggcaaaaagtttacgtcggag
tacaagtacgacggagagcgcgcccaaattcactacagcgaggataacggcttccatatt
ttttcccgcaactccgagacacacactggcaagtaccctgacgtcatcgcgatattacca
aacacctttgacgctgccgaggtacagtctttcattatcgacgcggaggtagtggcggtg
catccggagaccggggccctgcaagccttccaggtgctgcagcatcgaggtcgaaagaac
attgcggagaaagatgttagcatttcggtctgcttgttcgtgtttgacctattgtacttg
aacggagagccgcagctgaataagacactgcagcagcgccgggagttgctctggcgctac
atccgtcctctcccagcaaagctgtgttttgcagcgtacttggactctgacgacgtcgag
gacgtgcaaaagttcttagagaaatccattgcggatggctgcgaaggactaatggtgaag
acgctcgaggaggaggccacctacacccctgccaaacgctcgcactactggctaaagctg
aagaaggactacatggacggcgtcaccgatacgctggatctcgttcccatcgccgctttc
tatggcaagggcaagcgaactggcgtgtttggcggtttcctgctcgcgtgctacgatccg
aaggcggacgagtaccagagcatctgcaaaattggtactggtttccaggacgaagagctg
gagaagctcacacaatcattaaagcccttcgtggtacacgataagccgcgctactaccgc
gcaggtggagaagagccggacgtgtggctcactgaggcgcaagtgtgggaggtgaaggcg
gcggacttgtcagtgtcgccagtgcaccaggcggccgtggggcttgttgaccccaacaaa
ggcattgcgctgcgcttcccccgctacgtgcgacagcgcgaggacaaaaaccctgtggac
gcgacgaacacgcagcaggtggctgagatgtacaaggcgcagtccttggcagtgcaacac
gatgcgagcggtgatgctgagtgggctgtcacacggacagagacgccctga

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