Lysobacter caseinilyticus: LYSCAS_24770
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Entry
LYSCAS_24770 CDS
T07541
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
lcas
Lysobacter caseinilyticus
Pathway
lcas00020
Citrate cycle (TCA cycle)
lcas00190
Oxidative phosphorylation
lcas00650
Butanoate metabolism
lcas01100
Metabolic pathways
lcas01110
Biosynthesis of secondary metabolites
lcas01120
Microbial metabolism in diverse environments
lcas01200
Carbon metabolism
Module
lcas_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lcas_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lcas_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lcas00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LYSCAS_24770 (sdhA)
00650 Butanoate metabolism
LYSCAS_24770 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LYSCAS_24770 (sdhA)
Enzymes [BR:
lcas01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LYSCAS_24770 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
Thi4
GIDA
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
BCT93453
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All DBs
Position
2592460..2594265
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AA seq
601 aa
AA seq
DB search
MTSPNVPSAYKITEHKYDMIVVGAGGAGLRATFGLAQKGLQTACITKVFPTRSHTVAAQG
GISAALGNMGEDDWRFHFYDTIKGSDWLGDQDAIEYMCREAIPAIIELEHQGVPFSRTED
GKIYQRPFGGMTTHYGKGIAQRTCAAADRTGHAILHTLYQQSLAHDARFFIEYFALDLIM
DEEGACRGVLALDLAEGTLHLFRAQGVVLATGGYGRAYFSATSAHTCTGDGGGMALRAGL
GMQDMEFVQFHPTGIYGAGCLITEGVRGEGGILRNANGERFMERYAPNAKDLASRDVVSR
SMTIEIREGRGVGAHKDHINLDLTHLDPKDIHEKLPGIAESARIFAGVDVEKEPIPVIPT
VHYNMGGIPTNYHGEVVQLRNGDPDAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFG
RAVANRCAETIKPGGPHKPLASDACDKSLANLDRVRNARGSLPTAEIRNNMQRAMQADAA
VFRTGETLAEGVKKIREIHASFADVRVTDRSLVWNSDLVESLELQNLLGQALTTIVSAEN
RTESRGAHAREDFPDRDDTQWQKHSVCWVHEDGTTEIDYRPVHMYTLSGDVDVVPPKPRV
Y
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacctctccgaacgttccttccgcctacaagatcaccgaacacaagtacgacatgatc
gtcgtcggcgccggcggcgccgggttgcgcgccaccttcggcctcgcgcagaagggcctg
cagaccgcgtgcatcaccaaggtgttcccgacgcgctcgcacaccgtggcggcgcagggc
ggcatctccgccgcgctcggcaacatgggcgaggacgactggcgcttccacttctacgac
accatcaaggggtcggactggctgggcgaccaggatgcgatcgaatacatgtgccgcgag
gccatccccgcgatcatcgagctcgagcaccagggcgtgccgttctcgcgcaccgaagac
ggcaagatctaccagcgtcccttcggcggcatgaccacgcactacggcaagggcatcgcg
cagcgcacgtgcgccgcggccgaccgcaccggccacgcgatcctgcacacgctgtaccaa
cagtcgctcgcgcacgacgcgcgcttcttcatcgagtacttcgcgctcgacctgatcatg
gacgaggagggggcctgccgcggcgtgctcgcgctggacctggccgaaggcacgttgcac
ctgttccgcgcgcagggcgtggtgctggccactggcggctacggccgcgcgtatttctcg
gccacgtccgcgcacacctgcacgggcgacggcggcggcatggcgctgcgcgcgggcctg
ggcatgcaggacatggagttcgtgcagttccatcccaccggcatctacggcgccggttgc
ctgatcaccgaaggcgtgcgcggcgaaggcggcatcctgcgcaacgccaacggcgagcgc
ttcatggaacgctacgcgccgaacgcgaaggacctcgcctcgcgcgacgtcgtctcgcgt
tcgatgaccatcgaaatccgcgaaggccgcggcgtcggtgcgcacaaggaccacatcaac
ctggacctcacgcacctggacccgaaggacatccacgaaaagctccccggcatcgccgag
agcgcgcgcatcttcgcgggcgtggacgtggagaaggaaccgatcccggtcatccccacc
gtccactacaacatgggcggcatcccgaccaactaccacggcgaagtcgtgcagctgcgc
aacggcgatcccgacgcggtggtgccgggcctgtacgcgatcggcgaagccgcgtgcgtg
tcggtgcatggcgccaatcgcctgggttcgaactcgctgctcgacctggtcgtgttcggc
cgcgcggtcgccaaccgctgcgccgagacgatcaagccgggcggcccgcacaagccgctg
gcctcggacgcctgcgacaagtcgctggccaacctggatcgcgtgcgcaacgcgcgcggc
tcgctgcccaccgccgagatccgcaacaacatgcagcgcgccatgcaggccgacgccgcg
gtgttccgcaccggtgaaacactggccgagggcgtgaagaagatccgcgagatccacgcc
tcgttcgccgacgtgcgcgtgaccgaccgctcgctggtctggaactccgacctggtcgaa
agcctggaactgcagaacctgcttggccaggcgctcaccacgatcgtgtccgccgagaac
cgcaccgaatcccgcggcgcgcatgcgcgcgaggatttcccggatcgcgacgacacgcag
tggcagaagcacagcgtctgctgggtacacgaagacgggaccaccgagatcgactatcgc
ccggtgcacatgtacacgctcagcggcgacgtcgacgtcgttccgccgaagccgcgcgtc
tactga
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