Lemur catta (Ring-tailed lemur): 123643822
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Entry
123643822 CDS
T08326
Symbol
USP40
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 40 isoform X1
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcat01002
]
123643822 (USP40)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcat04121
]
123643822 (USP40)
Enzymes [BR:
lcat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123643822 (USP40)
Peptidases and inhibitors [BR:
lcat01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123643822 (USP40)
Ubiquitin system [BR:
lcat04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123643822 (USP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
ubiquitin
Motif
Other DBs
NCBI-GeneID:
123643822
NCBI-ProteinID:
XP_045415546
LinkDB
All DBs
Position
8:6013686..6097180
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AA seq
1236 aa
AA seq
DB search
MFGDLFEEDYSSVSNNQYGKGKKLKTKTLEPPAPREFTNLSGIRNQGGTCYLNSLLQTLH
FTPEFREALFSLGPEELGSFEDKDKPDAKVRIIPLQLQRLFAQLLLLDQEAASTADLTDS
FGWTSNEEMRQHDVQELNRILFSALETSLVGTSGHDLINRLYHGTIINQIVCKECKNISE
KQEDFLDLTVAVKNVSSLEDALWNMYVEEEVFDYDNLYHCGTCDRLVKAAKSAKLRKLPP
FLTVSLLRFNFDFVKCERYKETSCYTFPLRINLKPFCEQSELDDLEYIYDLFSVIIHKGG
CYGGHYHVYIKDVDHLGNWQFQEEKSKPDVNLKDLQDGGEVDDPLMILKAILLQEENNLI
TVDQLGQRLLKKTGVSWNKKYRKQHGPLRKFLQLHSQIFLLSSDESTVSLLKNCSLQAES
GFQRNDQQIFKTLTSESLGLSNNTSCPHWFDINDSKVQPIKEKDIEQQFQGKESAYMLFY
RKSRLQRPPEAQANPRYGVPCHLLNEMDAANIELKTKRAECDSANNNFELHLHLGPQYRF
FNGALHPVASQTESVWELTFDKRKTLGDLRQSIFQLLEFWEGDMVLSIAKLVPAGLHIYQ
TLEGDELTLCETEIADEEDIFVWNGVEVGGVQIQTGIDCEPLLLNVLHLDTSSEGEKCQQ
VIESPHVFPSNAEVGTVLTALTIPAGVVFINSAECAGEESWTAIPKEDMKKTFREQGLRN
GSSVLIQDSNNDNNSLLTKQGKWTSINEINWLQVKNLCQLESEEKQVKVSATGNTVVFDI
RITAIKELKLMKELAENSCLRPIDRNGKLLCPVPDCYTLKEAELKMGSSLGLCLGKAPTS
SQLFLFFAMGSDVQPGTEMEITVEETVSVRDCLKIMLEKSGLPGDTWHLRKMDWCYEAGE
PLYEEDATLKELMISSGDTLLLMEGKLPPLGFLMVPIWWYQPRGPSGHWESHRDQTSSTL
SHGSVCRAASTQGVPGNVPAEGSVLYVGDVEISEDAVLADLKSQAMTLPPFLESGVPSPA
FLRAWTVESKRPGRLLRSNRQPLKEYKLGRRTEICLEPLQKEENLGPQDMLLRTQMRIPG
ERAYAPAVDLVWDAARGCTAGSLRQRVAHFYSLPVEKIEIAKYFPEKFEWLPISSWNQQI
TKRKKKKKQDNLQTAPYYLKDGDTIGVKNLLVDDDDDFSTIRDDTGKEKQQQLAPGKKKS
QEALHVQSSDIFSSAETPGRPQGQEASLSIHVGSFR
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgtttggggacctatttgaagaggattattccagtgtgtcaaataaccagtatggaaaa
gggaagaaattaaagactaaaactttggagccacctgctcctagagaattcaccaattta
agcggaatcagaaatcagggtggaacctgttacctcaattcccttcttcagactcttcat
ttcacgcctgaattcagagaagctttattctctcttggtccagaagaacttggttctttc
gaagataaagataaacctgatgcaaaggttcgaatcatacctttacagttacagcgcctg
tttgctcagcttctgctcttggaccaggaagctgcatccacagcagacctcactgacagc
tttgggtggaccagtaatgaggagatgaggcaacatgatgtgcaggaattgaatcgaatt
ctcttcagtgctttggaaacttctttagttgggacctctggccatgacctcatcaatcgt
ctgtatcacggaaccatcattaaccagattgtttgtaaagaatgtaagaacatcagtgag
aagcaggaagacttcttagatctaacagtagcagtcaaaaatgtatctagtttggaagat
gcactctggaacatgtacgtagaagaggaagtttttgactatgacaacttgtaccactgt
ggaacttgtgacaggctggttaaagcagcaaagtcggccaaattacgtaagctgcctccc
tttcttactgtttcattgctaagatttaattttgattttgtgaaatgtgaacgctacaag
gaaactagctgttacacgttccctctccggatcaatctcaagcctttttgtgaacagagt
gaattggatgacttagaatatatatatgacctcttctcagttattatacacaaaggtggc
tgctatggaggacattatcatgtatatattaaagatgttgatcatttgggaaactggcaa
tttcaagaggaaaaaagtaaaccagatgtgaatttgaaagatcttcaggatggaggagag
gttgacgatccattgatgattctaaaagcaatcttattgcaggaggagaataatttaatt
actgttgatcagctgggccagagactcttgaaaaagacgggagtatcttggaacaagaaa
tacagaaaacagcatggaccactgcgaaagttcttacagctccattctcagatatttcta
ctaagttcagatgaaagtacagttagtctattgaagaactgttctcttcaggctgagtct
ggtttccaaaggaatgatcaacagattttcaagacacttacttcagaatccttgggatta
agcaataatacctcctgtcctcactggtttgatataaatgattccaaagtccaaccaatc
aaggaaaaggatattgaacagcaatttcagggtaaagaaagtgcctatatgttgttttat
cggaaatcccgattacagagaccccctgaagctcaagctaatccaaggtatggagttcca
tgtcatttgctgaatgaaatggatgcagctaacattgaactgaaaacaaaaagggcagaa
tgtgattctgcaaacaataattttgaattgcatctccacctgggccctcaatatcgtttc
ttcaatggggctctgcacccagtagcctctcaaacagaaagcgtgtgggagttgactttt
gataaaaggaaaactttaggagatctccgacaatcaatatttcagctgttagaattttgg
gaaggagatatggttcttagcattgcaaagcttgtacctgcaggacttcacatttaccag
acacttgaaggagacgaactgacactgtgtgaaactgaaattgctgatgaggaagatatc
tttgtatggaatggggtagaggttggtggagtccagattcaaactggtattgactgcgaa
cctctgcttttaaatgttcttcatctagacacaagcagtgaaggagaaaagtgtcagcag
gtgatagaatctccacacgtctttccatctaatgcagaagtgggcactgtcctcacagcc
ttaacaatcccagcaggtgttgtcttcataaacagtgctgagtgtgcaggtgaagagagc
tggactgccattcccaaggaagacatgaagaaaacattcagagaacaaggtctcagaaac
ggaagctcagttttaattcaggattctaataatgacaataacagtttgttaaccaaacaa
gggaaatggactagtataaatgagatcaactggctccaagttaaaaatttatgccaatta
gaatctgaagagaagcaagttaaagtatcagcaacaggtaacacggtggtgtttgatatt
cgaattacagccataaaggaattaaaattaatgaaggaactagctgagaacagctgtttg
agacctattgatagaaacgggaagctgctttgcccagtgccagactgttatactttgaag
gaagcagaattgaagatggggagttcattgggcctgtgtcttggaaaagcaccaacttcc
tctcagctgttcctgttttttgcaatggggagtgatgttcaacctggtactgagatggag
atcacagtagaagaaacagtatctgtgagagattgtttaaagataatgctggaaaaatct
ggcctacctggagatacatggcatttgcgaaaaatggattggtgctatgaagctggggag
cctttatatgaagaagatgcaacactgaaagaacttatgatatcttctggagatactttg
cttttaatggaaggaaaacttcctcctctgggtttcctgatggtgcccatctggtggtac
cagcctcggggtccctcaggacactgggagagccatcgggaccagaccagcagtactctt
tctcacggcagcgtgtgcagagctgcttccacccaaggtgttcctgggaatgtgcctgcg
gaaggttctgtcctctatgtgggagacgtagagatctcagaagacgctgtgctggcggat
ctgaagtctcaggccatgacgctgccccctttcctggagtctggtgttccgtccccagcc
ttcctcagagcctggacggtggagagtaagcgcccaggcaggcttttacgaagcaaccgg
cagccgctcaaggaatataaactaggacggagaacagagatctgcttagagccccttcag
aaagaagaaaacttgggcccccaggacatgctgctaaggactcagatgcgcatcccgggg
gagagggcctacgctccagccgtggacttggtgtgggacgccgcccgaggctgcactgcc
ggctccctgaggcagagggttgcccatttctattctctgcctgtggagaaaatcgaaatt
gccaaatacttccctgaaaagttcgagtggcttccaatatctagctggaaccagcaaatt
accaagagaaaaaagaagaaaaagcaagacaatttgcaaacggcaccttattacttgaaa
gatggagatactattggtgttaagaatctcctggttgatgacgacgacgatttcagtaca
atcagagatgacactggaaaagaaaaacagcaacaactcgctccggggaaaaagaaaagc
caagaagccctccacgtgcagagcagtgacatcttctccagtgcagagacacctggccgg
ccccaaggacaagaagcttctctttccatccatgttgggagtttcagatag
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