Lemur catta (Ring-tailed lemur): 123649832
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Entry
123649832 CDS
T08326
Symbol
PCDH15
Name
(RefSeq) protocadherin-15 isoform X1
KO
K16500
protocadherin-15
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcat03037
]
123649832 (PCDH15)
04515 Cell adhesion molecules [BR:
lcat04515
]
123649832 (PCDH15)
Cilium and associated proteins [BR:
lcat03037
]
Primary cilia and associated proteins
USH complex and associated proteins
123649832 (PCDH15)
Cell adhesion molecules [BR:
lcat04515
]
Cadherins
Protocadherins
123649832 (PCDH15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
ECD
CshA_repeat
Motif
Other DBs
NCBI-GeneID:
123649832
NCBI-ProteinID:
XP_045423995
LinkDB
All DBs
Position
14:complement(35942078..36576974)
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AA seq
1956 aa
AA seq
DB search
MFQQFYLWKCLASGIIIGSLFTICFGQYDDDWQYEDCKLARGGPPATIVAIDEESRNGTI
LVDNMLIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIV
VQVQCINKKVGTVIYHEVRIVVRDRNDNSPTFTHESYYATVNELTPVGTTIFTGFSGDNG
ATDIDDGPNGQIEYVIQYNPDDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN
DRAQNLNERRTTTTTLTVDILDGDDLGPMFLPCVLVPNTRDCRPLTYQAAIPELRTPEEL
NPIIVTPPIQAIDQDRNIQPPSERPGILYSILVGTPEDYPRFFHMHPRTAELSLLEPVNR
DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMSSYQGYILESAPVGATIS
DSLNLTSPLRIVALDKDIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQ
TYTFSITAFDGVQESEPVIVSIRVMDANDNTPAFPEISYDVYVYTDMHPGDSVIQLTAVD
ADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVELIVGRTYALTVQAADNAPPAERR
HSICTVYIEVLPPNNQSPPRFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENG
DPQRVFNLSETTGILTLGKALDRESTDRYILIITASDGRPDGTSTATVNVVVTDVNDNAP
VFDPYLPRNLSVVEEEANAFVGQVRATDPDAGINGQVHYSLGNFNNLFRITSNGSIYTAV
KLNREVRDYYELVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAG
TTFLQIEAKDVDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFL
VEAFDIYGTMPPGIATVMVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADT
PGLPGSRVRYRVDDVVFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEPV
MSSSATVKILVLHPGEIPRFTQEEYRPPPVSELATRGTMVGVISAAAINQSIVYSIVSGN
EEDKFGINNVTGVIYVNAPLDYETRMSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQ
DENDHPPVFQKKFYIGGVSEDARMFASVLRVKATDKDTGNYSAMAYRLIIPPIKEGKEGF
VVETYTGLIKTAMLFHNMRRSYFKFQVIATDNYGKGLSGKADVLVSVVNQLDMQVIVSNV
PPTLVEKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYTKCDLTVYAIDP
QTNRAIDRNELFKFLDGKLLDINKDFQPHYGEGGRILEIRTPEAVTSIKKRGESLGYTEG
ALLALAFIIILCCIPAILVVLVSYRQFKVRQAECTKTARIQSALPAAKPAAPAPAPVAAP
PPPPPPPGAHLYEELGDSTMHNLFLLYHFQQSRGNNSVSEDRKHQEVVMPFSSNTIEAHK
PPPIDESLKNQPKSTRKFTFPSDEDALCTHNLLYKENIDERSTNSGFSLRTDFVDPFLPK
TQAKSESLRGPREKIQRLWSQPVSLPKRLMRNVPNRQEVIDLPQWQSTRQKAENESPGTY
PNKRSSGNPLLTTEDSNLTEKEEKRQGETLIVTGTKELKSLSSDSSFCSPRPRFSFSTLP
TVSRTVELKSEPNVLTSPADCSLELSPPCILNSSLIQRETPACMLAVETKKNILEKCSHV
PSSSPSPFPPPPPSIPPPPPPLPPPPPPSLDITPFSLSCPPACPPRLPPPFPHPPPFPLS
VPPSAPPTPPPLPSLPTLPPPPLPLPCPLPPSASFLSTECVCLPVDKCTPNKTPAEEIKP
SVTWLSASTTGRNADPQREPKGILKHIENLAELEKTVANMYSQIKKNYPLTNISELQTIC
PSEITNLEITSEKNQENSNVIDEGIEKQPHSQATSL
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaacagttttatctctggaaatgtttagcttcagggatcatcattggctctctt
ttcacaatctgcttcggccagtacgacgatgactggcaatatgaggattgcaaactagct
aggggaggaccaccagctaccatagttgctattgatgaagagagtcggaatggtacaatt
ctggtggacaacatgttgatcaaagggactgctggaggaccagaccccaccatagaactc
tctttaaaggacaatgtggattactgggtgttgctggatcctgttaaacaaatgcttttc
ctgaacagcacgggcagagttctggatagagatccaccaatgaacatacactccattgtg
gtgcaagtccagtgcatcaacaaaaaagtgggcactgttatctaccatgaagtgcgaatc
gtggtgagagacaggaatgacaactcacccacgttcacgcatgaaagctactatgccaca
gtaaatgagctcactcctgttggcaccacaatatttacaggattttcaggagacaatgga
gctacagacatagatgatggccctaatggacagatagaatatgttattcagtataatcca
gatgatccgacatccaatgacacctttgaaattcccctaatgttgactggaaatgtagtg
ttaagaaagaggctcaactatgaagataaaactcgctactttgtcatcatccaagctaat
gaccgtgcacaaaacctgaacgaaaggcgaaccactaccaccactctcacagtggatatt
ctggatggagatgacttgggtccgatgtttctaccttgtgtccttgtgccaaacactcgt
gattgtcgtccactcacttaccaagctgccatacctgagttgagaactccggaagaactg
aaccccattattgttaccccaccgatccaagccattgatcaagaccggaatattcaacca
ccatcagaaaggccaggcatcctctattccatccttgttgggactcctgaggattaccca
cgatttttccatatgcatcctaggactgcagaacttagtctcctggaaccagtaaacaga
gactttcaccagaaatttgatttggttattaaggctgaacaggacaatggccatcctctt
cctgcctttgccagtctacacattgaaatactggatgaaaacaatcaaagcccgtacttc
acaatgtccagttatcaaggctatattctggaatctgcccctgtgggtgcaaccatttct
gacagtttaaatttgaccagtcctctaagaatagtagctctggacaaagacatagaagat
acaaaagacccagagcttcacctttttctgaatgattacacttccgtcttcacggttacc
cagactggtatcactcgctacctcaccttacttcaaccagtagacagagaagaacaacaa
acttacactttttcgataacagcatttgatggtgtacaagaaagtgagccagttatcgtc
agtatccgagtgatggatgcaaatgataacactccagcattccctgaaatatcctatgat
gtctatgtttatacagatatgcaccctggagacagcgtcatacagctcactgcagtcgac
gcagacgaagggtcaaatggggagatcacatatgaaatcctggttggggctcagggagac
ttcatcatcaataaaacaacagggcttatcaccatcgctccaggggtggaattgatagtc
gggcggacttacgcgctcacagtccaagcagcggataatgctcctcctgcagagagaagg
cactccatctgtactgtgtacattgaagtacttccaccaaataatcaaagccctcctcgc
ttcccacagctgatgtatagtcttgaaatcagtgaagccatgaggattggtgctgtttta
ttaaatctacaggcaactgatcgagagggagatccaataacgtacgccattgagaatgga
gatcctcaaagggtttttaatctttcagaaactactgggattctaaccttagggaaagcc
ctggacagggaaagcaccgaccgctacattctgatcatcacagcttcagatggcagacca
gatgggacttcaactgccacagtaaatgtggtggtgacagatgtcaatgacaatgctcca
gtgtttgatccctatctacctagaaatttatctgtggtagaggaagaagccaatgccttt
gtgggtcaagtaagggcaacagaccctgatgctggaataaatggccaagtgcactacagt
ttgggtaacttcaataatctttttcgcatcacatccaatgggagcatttacacagcagtg
aagcttaacagagaagtcagggactactatgaacttgttgttgtggcaacagatggagcg
gtacaccctcgtcattcaactctaacactggccattaaggttttggatattgatgataac
agtcccgtgttcaccaattcaacatacactgttgttgtggaagagaatctgccagctggg
actaccttccttcaaatagaggccaaagatgttgaccttggagcaaatgtgtcttaccgg
ataagaagcccggaagtgaagcacttttttgcactacatccatttacaggagaactatcc
cttttaaggagtttagattatgaggcatttccagaccaagaagcaagtatcacttttctg
gtggaagcctttgatatttatggaacgatgccacctggtattgctactgtcatggtgata
gtaaaggatatgaatgattatcctcctgttttcagtaaacggatctacaaagggatggtg
gctccagatgcggtcaagggtacaccgatcacaacagtttatgctgaagatgcagacact
cctggattacctggaagtcgtgtgaggtatagagtggatgatgtcgtgtttccttaccct
gccagtatttttgatgttgaagaagattctggaagagtagtaactcgagtcaatcttaat
gaagaacctacaacaatttttaagttggtggtagttgcctttgatgatggtgagcctgtg
atgtccagcagtgccacagtgaaaattcttgttttacatcctggagaaatcccacgtttc
acacaggaggaatatagacctcctccagtaagtgaacttgccaccagagggaccatggtt
ggtgtaatttctgctgcggccattaatcagagcattgtgtactccattgtttcaggaaac
gaagaagataagtttggaattaataatgtcactggcgttatctatgtgaatgcccctctg
gattatgagaccaggatgagctatgtacttcgagtccaagctgattccctggaagtggtc
cttgccaatctccgagttccttcaaaaagcaatacagctaaagtgtacattgaaattcag
gatgaaaatgatcatcccccagtgtttcagaaaaaattttacattggaggtgtatctgaa
gacgcaagaatgtttgcttctgtgctcagagttaaggctactgataaagatactggcaat
tacagtgccatggcatacagactcataataccaccaattaaagaaggaaaagaaggattt
gtggtggaaacatatacagggcttatcaaaactgctatgctcttccataatatgaggaga
tcctacttcaagtttcaagttatcgcaactgacaactatggaaagggactgagcggcaaa
gcagatgtacttgtctctgtggtcaatcagctggacatgcaagtcattgtttccaacgtg
ccccctactctagtggaaaaaaagatagaagatcttacagagattttggaccgctatgtt
caggagcaaattcctggtgccaaggttgtggtggagtccatcggtgctcgccggcatgga
gatgccttttccctagaagattacaccaaatgtgacttgactgtctatgcaattgacccc
caaaccaacagagccattgacagaaatgagctatttaaatttttggatggcaaactgctc
gatatcaataaagactttcagccacattatggggaaggaggacgtattctggagatccgg
actccagaggcagtgaccagcattaaaaagagaggagaaagtctaggatacacagaaggg
gccttgctggctctggctttcatcatcatcctctgctgcattcctgccatcttggtagtt
ttggtcagctacagacagtttaaagtacgccaagctgagtgcaccaagactgcacgaatt
caatccgcattacccgcggctaaaccagcagcgcccgcccctgcacctgtggcagcgccc
ccgcccccgccgccgcctccgggcgcgcatctctatgaagaacttggagacagcacaatg
cataatcttttccttctctaccattttcaacaaagcaggggaaataactcagtctcagaa
gacaggaaacatcaggaagttgtgatgcccttttcttccaatactattgaggctcacaag
ccacctcctatagatgaatcacttaagaaccaaccaaagtctacaagaaaatttacattt
ccatctgatgaggatgccttgtgtacccataatctcctttataaggaaaatatagatgaa
agatcaacaaattcaggcttttcactgagaacagattttgtagacccatttttacccaaa
acacaagccaagagtgagtctctgaggggcccaagggaaaagattcagaggctatggagt
cagccagtcagcttacctaagagactgatgaggaacgttccaaataggcaagaagtcata
gatctgccgcaatggcaaagcaccaggcagaaagctgaaaatgaaagccctggaacctat
ccaaacaaaagaagtagcggcaatccattacttacaactgaagactcaaatttgacagag
aaagaggaaaaaagacaaggtgaaacattgattgtaacgggaacaaaagagttgaaatct
ctctcttcagactcttcattttgctctcccagacctcgcttctcattctccactttgcca
actgtttcaagaactgtggaactcaagtcagagcctaatgtcctcacctctcctgctgac
tgttccttggaactttctcctccgtgcattttaaattcttcactcattcagagagagaca
cctgcctgtatgttagctgttgaaaccaaaaagaacattcttgaaaagtgttcccatgtt
ccttcttcttcgccctctccctttcctcctcctcctccttctattcctcctccccctcca
cctcttcctcctcctcctcctccttctcttgacattactcctttttctctttcctgtcct
cctgcttgtcctcctcgtctccctcctccttttcctcatcctccaccatttcccctttct
gttcctccttctgctccacctactcctcctcctctaccttcacttccaactcttcctcca
ccacctcttcctcttccttgtccactgcctccttcagcttcgtttctatccacagagtgt
gtttgtttgccagtcgataaatgcactcccaacaagacacctgccgaggaaattaaaccc
tctgtgacatggctttcagcatcaacaacagggcgtaatgcagaccctcaaagagaacca
aagggaatcctcaaacatattgaaaatttagcagaacttgaaaagacagttgctaacatg
tacagtcaaataaaaaaaaactatccactcacaaacatctcagaacttcaaactatttgc
ccttcagagataacaaatcttgaaatcacatctgaaaaaaaccaggagaattcgaatgtt
atcgatgagggaattgaaaaacaacctcacagtcaagctacttcactgtaa
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