Legionella clemsonensis: clem_10165
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Entry
clem_10165 CDS
T05016
Name
(GenBank) Putative DNA ligase-like protein/MT0965
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
lcd
Legionella clemsonensis
Pathway
lcd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
clem_10165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcd03400
]
clem_10165
Enzymes [BR:
lcd01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
clem_10165
DNA repair and recombination proteins [BR:
lcd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
clem_10165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_N
Motif
Other DBs
NCBI-ProteinID:
ASQ46582
UniProt:
A0A222P423
LinkDB
All DBs
Position
complement(2287070..2287681)
Genome browser
AA seq
203 aa
AA seq
DB search
MGLNVYHQKRNFKKTPEPKGKIHQEENYRFVMQKHAASRLHYDFRLELDGVLKSWAIPKG
PCLDPTVKRLAMHVEDHPIEYGTFEGIIPKGEYGGGTVMLWDEGEWESLDENPRKAYEKG
HLRFKLHAKKLQGRWDLIRFKNENEAWFLIKYKDEFAKPLDEYDITLAKPNSVTTEQSLD
EIAENYENIWSSKEGLKTSEKKK
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggggttaaatgtctatcatcaaaaaagaaattttaaaaaaacaccggagcctaaggga
aaaattcatcaagaggaaaattatcgttttgttatgcaaaaacatgcggccagccgtctt
cattatgatttccgtcttgagcttgatggggtgcttaaaagttgggcaatacccaaagga
ccttgtctggatccaaccgtaaaacgtctagccatgcatgttgaagatcatcccattgaa
tatggtacttttgagggtattattcccaaaggtgaatacggtggtggaaccgtaatgctt
tgggatgaaggggaatgggagtccctggatgaaaatccccgcaaagcctatgaaaagggg
catttacgctttaagttgcatgcaaaaaagctacaaggacgctgggacctcatccggttt
aaaaatgaaaatgaagcctggtttttaataaaatacaaggatgaatttgctaaaccactt
gatgaatatgatattacccttgcaaaacctaatagtgtgacaacagaacaatctctggat
gagattgccgaaaattatgaaaatatttggagcagtaaggaaggtttaaagactagtgag
aaaaaaaagtaa
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