Lates calcarifer (barramundi perch): 108873200
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Entry
108873200 CDS
T04895
Name
(RefSeq) eukaryotic translation initiation factor 5B
KO
K03243
translation initiation factor 5B
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lcf03012
]
108873200
Translation factors [BR:
lcf03012
]
Eukaryotic type
Initiation factors
eIF-5
108873200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
Roc
ATP_bind_1
Ras
AAA_22
Motif
Other DBs
NCBI-GeneID:
108873200
NCBI-ProteinID:
XP_018516837
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All DBs
Position
LG7_2:complement(616463..626281)
Genome browser
AA seq
1196 aa
AA seq
DB search
MGKKQKKSGEDSAKDDGIDIDALAAEIEGAGASKEPKGKKVKKKGGKKDDFDEDDILKEL
EELSLETQGGKGKKTDTTEEVEIVEPPKEKKKTRKGRKGAASPQDEEDDEGEGRLDAEKN
GEQKDRKAPPAAPPSDSDDDSSSRSRLKAKGGKKGGKKPSISDEDEDEGVRKGGGGKEDE
SEDDEEFTSRRDQKKKSKGKPAKAESGEEEEQEEEAGGFKIKTAAQKKAEKKERDRKKKE
EERMKQKKLKEKEKEGGAEAKKEPEKKTTATEATPPQVAPPAAAMEEQEGAEPAAEEEAE
GDKKKKDKKKKKGEKEEKEKKKGPSKATVKAMQEALAKMKEEEERAKREEEERLRRLEEL
EKQRQEQERLEQERKEKKKQKEKERKERLKKEGKLLTKAQREARARAEATLKLLQAQGVE
VPSKDSVPKKKPVYGDKRKKKPSAQTPEETSEVTSPTSETPEPVAMETEAKTPAAEPEVK
PDAAVDDWEAIASDEEKELKKVHIEVKEENAAAPPQPTGSEEDEEDDDEEEDDDDDEEDE
EEEEESEEEKEPTAAGQGKRKESEDESSESDDDDGRTKEERLYDRAKRRIEKRRVENMKN
IDLDTLRAPVVCVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPKETIEEQTK
MVKNFDREIKIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTLESINLL
KEKKCPFIVALNKIDRLYDWKKSPDTDIVTTLKKQKKNTKDEFDERAKAVIVEFAQQGLN
AALFYENKDPRTFVSLVPTSAHSGDGMGNLIALLIELTQTMLARRLAHCDELRAQVMEVK
ALPGMGTTIDVILINGRLREGETIIVPGVEGPIVTQIRGLLLPPPLKELRVKNQYEKHKE
VSTSQGVKILGKDLEKALAGLPLLVAHRDDEIPVLRDELVRELKQTLSSIKLEEKGVYVQ
ASTLGSLEALLEFLRTSKVPYAGINIGPVHKKDVMKASTMLEHDPQYAVILAFDVKVERE
SQEMADSLGVRIFSAEIIYHLFDAFTKYREDYKKAKQDEFKHIAVFPVKLRVLPQFIFNS
RDPIVMGVSVEAGVLRQGTPLCVPSKGFVDIGVVTSIEMNHKSVDSAKKGQEICVKIEPI
PGESPKMYGRHFEATDIIVSKITRASIDALKNWFRDEMQKSDWQLIMELKKTFEII
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaacagaagaaatccggggaggacagtgccaaagatgacggcatcgacatc
gacgctctggcggcggagatcgaaggagccggagcttctaaagagccaaaagggaagaaa
gtaaagaagaaaggaggaaagaaggacgactttgacgaggacgacatcctgaaggagctg
gaggagctgtctctggagactcagggaggaaaaggtaagaagacagacaccacagaggaa
gtggagatcgtcgagcctcccaaagagaagaagaagaccaggaaggggaggaagggtgcg
gccagcccccaggacgaggaggacgatgaaggtgaaggtcggcttgatgcagagaagaac
ggagagcagaaagacaggaaggcgcctcctgctgctcctccatcagactctgatgacgac
agcagctcccgctctcgcctcaaggccaaaggaggaaagaaaggaggcaagaagccatcg
atctcggacgaggacgaggacgaaggcgtgagaaaaggaggaggagggaaagaggacgag
tctgaggacgatgaggagttcacttccaggagagaccagaagaagaagagcaagggcaag
ccggcgaaggcggagagcggggaggaggaggagcaggaggaggaggcgggcggcttcaag
atcaagacggcggcgcagaagaaggcggagaagaaggagagggacaggaagaagaaggag
gaggagaggatgaagcagaagaagctcaaggagaaggagaaggagggcggcgccgaggct
aaaaaagagccagagaagaagacaacggcaacagaggccacgccccctcaggtagctcca
cctgcagcggcgatggaggaacaggaaggggcggagccagcagcagaggaggaggccgag
ggcgacaagaagaagaaagacaagaagaagaagaagggagagaaggaggagaaggagaag
aagaaaggacccagcaaggccactgtgaaggccatgcaggaggctctggccaagatgaag
gaggaggaggagcgagccaaacgagaggaggaggagcgcctgaggaggctggaggagctg
gagaagcagaggcaggagcaggagcgtctggagcaggagcgtaaggagaagaagaagcag
aaggagaaggagaggaaggagcgtctgaagaaggaggggaagctgctgactaaagcccag
agagaagctcgagctcgggctgaggccacgctcaaactgctgcaggctcagggtgttgaa
gtgccatccaaagactcggtgccaaagaagaagccagtttacggagacaagaggaagaag
aagcccagcgctcagactcctgaagaaacatcagaggtcacctcgccgacgtcggagact
ccggagcctgttgccatggagacggaggccaagacaccggctgcagagccagaggtgaag
ccggacgctgctgtcgacgactgggaggcgatcgccagcgacgaggagaaagagctgaag
aaagtccacatcgaggtgaaggaggagaacgccgccgctcctcctcagccgacaggcagc
gaggaggacgaggaggacgatgacgaagaagaggacgacgacgacgatgaggaagacgag
gaggaggaggaggagagcgaggaggagaaggagccgacggcggctggccagggcaagagg
aaggagagcgaggacgagagcagcgagagcgacgacgatgacgggaggacgaaggaggag
cgtctgtacgaccgggccaagaggagaatagagaaacgaagagtggagaacatgaagaac
atcgacctggacacgctcagagctccggtggtgtgtgtgctcggacacgtcgacacgggg
aagaccaagatcctcgacaagctgcgacacactcatgtccaggacggtgaggccggagga
atcactcagcagatcggagccacgaacgttcccaaggagacgatcgaggagcagacgaag
atggttaaaaactttgacagagaaatcaagatccccggcatgttgatcatcgacacacca
ggacacgagtccttcagtaacctgaggaacagaggcagctctctgtgcgacatcgccatc
ctggtggtcgacatcatgcacggcctggagcctcagacgctcgagtccatcaacctgctg
aaggagaagaagtgccccttcatcgtcgccctcaacaagatcgaccgtctgtacgactgg
aagaagagtccggacaccgacatcgtgaccacgctgaagaagcagaagaagaacaccaag
gacgagtttgacgagagagccaaggccgtcatcgtggagttcgctcagcagggtcttaac
gccgccttgttctatgagaacaaagacccccggacgttcgtgtcgttggttcccacctcg
gcccacagcggcgacgggatgggaaacctcatcgcgctcctgatcgagctcacgcagacg
atgttagctcgccggctagcgcactgcgacgagctgcgagctcaggtcatggaggtgaaa
gctctgcctggaatgggaaccacgatagacgtcatcctgattaacgggcgactgcgggag
ggagagaccatcatcgtcccgggggtggagggaccaatcgtaacgcagatcagaggcctg
ctgctgcctcctcctctgaaggagctcagagtcaagaaccagtacgagaagcacaaggag
gtgtcgacgtctcagggggtgaagatcctgggtaaagacctggagaaggcgttggcgggg
ctccccctgctggtggctcacagggacgacgagatccccgtcctgagggatgaactggtg
cgagagctgaagcagactctgagctccatcaaactggaggagaagggagtttatgtccag
gcgtccacgctgggatctctggaggctctgctggagttcctccggacgtctaaagtcccc
tacgccggcatcaacatcggcccagttcataagaaggacgtgatgaaggcgtcgaccatg
ctggaacacgacccacagtacgcggtgatcctggcgttcgacgtgaaggtggagagggag
agtcaggagatggccgacagtctgggagttcggatcttctcggctgaaatcatctaccat
ctgttcgacgccttcaccaagtacagggaggactacaagaaggccaagcaggacgagttc
aaacacatcgctgtgtttccggtgaagctccgggttcttcctcagttcatcttcaactcc
agagatcccatcgtgatgggggtgtcggtggaggccggcgtcctgagacaggggacgccg
ctctgcgtgcccagcaaagggttcgtggacatcggcgtggtgacgagcatcgagatgaac
cacaagtccgtcgacagcgccaagaaaggccaggagatctgcgtcaagatcgagcccatt
cccggggagtcccccaagatgtacggccgccattttgaagccaccgacatcatcgtcagc
aagatcacgcgggcgtccatcgacgctctgaagaactggttcagagacgagatgcagaag
tccgactggcagctgatcatggagctgaagaagaccttcgagatcatctga
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