Lates calcarifer (barramundi perch): 108873994
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Entry
108873994 CDS
T04895
Symbol
grin3bb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108873994 (grin3bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108873994 (grin3bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108873994 (grin3bb)
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Glutamate (ionotropic)
108873994 (grin3bb)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
ATG16
Motif
Other DBs
NCBI-GeneID:
108873994
NCBI-ProteinID:
XP_018517850
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All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MVTGVPESGLSELLLTVLRQSGWREGTVVLCQGWEEARGLLRLLEGGSDASWDGGSGVTW
HLRALLNLTRSAHDDTQIHDFLSRHFRQTQPPPASVLLFGTDPQCAAAVLRSAQDLGLTL
PMVHWVLGQPLNPDELHAIGLPLGLLAYGQVDRKPLDFYVRDALQLITRAVAAATMVRPD
LALIQNMVNCYDKPNKHEVPSSGQYLSRFLSNTSFSGLTGPIRVHQNQSHVLTSQRFHIW
SLRRDALGQPTWVTVGSWEGGQLQVEDQGVWQGPKPRHRTEGMGGRTRGRWRAGMPVAGS
RVRVVTLVEHPFVFTRDVDDEGNCPAGQFCLDAGTNNSETLQRYFREVAGGNGSFLPAQY
SKCCYGYCIDLLEKLAEDLGFEFDLYIVGDGKYGAWKGGRWTGLVGDLLNGLADMAVTSF
SINSARSRVIDFTSPFFSTSLGILVRSKDTAAPIGAFMWPLHWSMWVGIFLALHITALFL
TLYEWKSPFGMTPHGRNRMRVFSYSSALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIF
CLLVLSSYTANLAAVMVGEKTFEEVSGIHDAKLHHPSRGFRFGTVRESSAEDYMKKSFPE
MHEYMRRFNEPTTPEGVATLKTDPPQLDAFIMDKALLDYEVSIDADCKLATVGKPFAIEG
YGIGLPQNSPLTSNISEFISRYKSDGYMDLLHDKWYKVVPCGNRVFAVTETLQMGISHFS
GLFVLLCFGVGGALLTLAGEHGFYRLVLPHIRRRQNLKYWLHTSQKIHRALNMTYEDVKR
QRAEKEKSCNLQKSPGPPAPGASAKWNNETSKDTAATMKDARDFKRVHFNLETLNTRRLL
ARIAASDTKGGVVKGEGEGLAKPRVGPNSGLCENGGPAASFASLVLSLPSSSSSSSSSSS
VRPNTSAPPPAAVAPPPAASVAPSPATVAPPQPGELQELQDQIEQMREKLRTALARRAEI
QTTLAKPVATGTNNPTPVTVTGMTMATTTMTTTTTTTTMTMTTGAPSTLLPTVAPATPLP
ANTKCVMTMTDPPHKVLSKVRPLHSRLTNQRR
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggtgacgggggttccggagtctggtctgtctgaactgttgctgacggttctgcggcag
tctggttggagggagggtacggtggttctttgtcagggctgggaggaagctcgaggtctc
ctgcggctactcgagggtgggagcgatgcatcatgggatggtgggagcggggtaacctgg
cacctgcgagcccttctgaacctgacacggtcggcccacgacgacactcagatccacgat
ttcctgtcccgacacttcagacagacgcagcccccgccggcatcagtgctgctttttgga
actgatccacagtgcgcggcagcagtgctgcgcagcgcccaggacctgggcctcacctta
cccatggtgcactgggtgctgggtcagccgctcaaccctgacgaactgcatgccatcggg
ctgcccttgggcctgctagcctacggacaggtggacaggaaaccgcttgacttttatgtc
agagacgccttgcagctcatcaccagggcagttgccgcagcaaccatggtgagaccagac
ctggccctcatccagaacatggtgaactgctatgacaaacccaacaagcacgaggtgcca
tcatcaggacagtacctgtccaggtttctgtccaacacgtctttctctggtctgacgggt
ccaatccgagtccaccagaaccagtctcacgtcctcacctcacagcggttccacatctgg
agcctgcggcgggacgctctgggccaacccacctgggtgacagtgggcagctgggagggg
ggtcagctacaggtggaagaccagggagtctggcagggacccaaacctcggcacaggaca
gaggggatgggcgggaggaccagggggcgctggagggctggtatgccggtggctgggagt
cgggtccgggtggtgactctggtggaacatccctttgtgttcacgcgggacgtggacgac
gagggcaactgcccagccggtcagttctgcctggatgccgggaccaacaactcagagact
ctgcagaggtacttcagggaggtggctggtgggaacggcagcttcctgcctgcacagtac
agtaagtgttgctatggatactgcatcgacctgctggagaagctggccgaggacctgggc
tttgagttcgacctttacatcgttggagatgggaagtacggcgcatggaaggggggccgc
tggactggcctggtgggggatcttcttaatggattggcagacatggccgtcacctccttc
agtatcaactccgctcggagtcgggtgattgacttcacctcgcccttcttctccaccagc
ttgggcatcctggtgcgcagtaaggacacggcggctcccatcggagccttcatgtggccc
ctgcactggtccatgtgggtcggcatcttcctggcgctacacatcacggcactcttcctc
actctttatgagtggaagagtccgtttggcatgacgcctcacggacgcaacaggatgaga
gtgttctcgtactcgtcggctctgaacctttgctatgccatcctgtttggacgcaccgtc
tcctccaagacaccaaagtgctggacgggtcgcttcctgatgaacctgtgggccatcttc
tgcctgttggttctgtccagctacactgccaaccttgccgccgtcatggtgggagagaag
accttcgaggaggtctcagggattcatgatgccaagctgcaccacccttcccggggtttt
cgttttgggacggtgagggagagcagcgctgaggattacatgaagaagagttttccagag
atgcatgagtacatgagacgcttcaatgaaccaactacacctgaaggagttgccactctc
aagacagatcctcctcagctcgacgccttcatcatggacaaagctctgctggactacgaa
gtttccattgatgccgactgtaaacttgcgactgttgggaaaccattcgccattgaaggt
tatggtatcggcctgcctcagaactctcctctgacatccaacatctccgagttcatcagc
agatataaatcagatggttacatggacctgttgcacgacaagtggtacaaagtggttccc
tgtgggaaccgagtgttcgctgtcactgagactcttcagatggggatcagccacttctca
ggcctctttgtgttgttgtgttttggagtgggcggagctttgctgactcttgcaggtgaa
catggtttctaccgactcgtcctgccacacatccgccgccgacagaacctcaaatactgg
ctgcacacctcccagaaaatccatcgagctctgaacatgacgtatgaagacgtgaagagg
cagagagctgagaaagagaaaagctgtaacctgcagaagtcgcctggcccccctgccccc
ggagcctctgccaagtggaacaatgagactagtaaagacactgccgccaccatgaaggac
gccagagacttcaaacgagttcacttcaacctagagaccctcaacacccgccgtctgctt
gcccgcatcgctgcctccgacaccaagggaggggttgttaaaggtgagggggaggggcta
gccaagccgagggtggggccaaacagcggactgtgtgagaacggaggaccagcagcttca
tttgccagtctggtgctctccctcccctcctcatcctcatcctcatcttcctcctcctct
gtgcgacccaatacctctgctcctcctcctgcagctgtagctcctcctcctgcagcttca
gtagccccatctcctgccacagtggctccgccccagcccggcgagctgcaggagctgcag
gaccagattgaacagatgagggagaagcttaggacggctctggctaggagggccgagatc
cagaccaccctggccaaacctgttgccacaggtacaaacaacccgactcctgttactgtg
acagggatgacaatggcaacaacaacaatgacaacaacaacaaccacgaccacgatgaca
atgacaacaggagccccgtccaccctcttacccactgttgccccggcaacaccactccct
gccaatacgaagtgcgtgatgaccatgacggacccgcctcacaaagtcctgtccaaagtc
cggcccctccacagcagactgaccaatcagaggaggtga
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integrated database retrieval system
