KEGG   Lates calcarifer (barramundi perch): 108874044
Entry
108874044         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase NEDD4-like
  KO
K13305  E3 ubiquitin-protein ligase NEDD4-like [EC:2.3.2.26]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04120  Ubiquitin mediated proteolysis
lcf04144  Endocytosis
lcf04530  Tight junction
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108874044
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108874044
  09144 Cellular community - eukaryotes
   04530 Tight junction
    108874044
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108874044
   04121 Ubiquitin system [BR:lcf04121]
    108874044
Enzymes [BR:lcf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     108874044
Membrane trafficking [BR:lcf04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    108874044
Ubiquitin system [BR:lcf04121]
 Ubiquitin ligases (E3)
  HECT type E3
   108874044
SSDB
Motif
Pfam: HECT WW C2 MUG113
Other DBs
NCBI-GeneID: 108874044
NCBI-ProteinID: XP_050928886
LinkDB
Position
LG9:13818052..13861261
AA seq 1012 aa
MAANYEPIYGLSEDEHETRVLRVKVIAGIDLAKKDIIGASDPYVKLSLYVADENRELALV
QTKTIKKTLNPKWNEEFYFRVCPQNHRLLFEVFDENRLASSKNGLFHLGQTRDDFLGQVD
VPLSHLPTEDPAMERPYTFKDFLLRPRSHKSRVKGYLRLKMAYLPKQGGHEEEAGEMREE
AEGWDESADSGSQRPQQLLPPLPPGWEEKVDNLGRTYYVNHNNRSTQWKRPSNMDVISET
ESDNQQRQIHQEAHRVFRSRRHISEDLENEHLEPRDMDNSWELITEEDSNDSLSQSLPGP
SSILTPQHPPTPVTREFAEDLNLRLSLTPDTNGEVPGPSSALSQLSNRLRSSSMTDGVSD
QAQAPPLTQSSQTRRTRAQTVSGGEEPMSPSATAYTLTTPGLPPGWEERKDAKGRTYYVN
HNNRTTTWTRPIVQLTEDGASTSAAAAASSGGASALAPASTPSSSSNASNNHLHEPQVRR
PRSLSSPTVTLSTPLEGANNIQVRRAVKDTFSNPQSPQPSPYSSPKSQHKAQQSFLPPGW
EMRIAPNGRPFFIDHNSRTTTWEDPRLKYPVHMRNKNSMEPGDLGPLPPGWEERVHTDGR
TFYIDHNTKNTQWEDPRLQSPAITGPAVPYSREFKQKYDYFRKKLKKPADIPNRFEMKLH
RNNIFEESYRRIMSLKRPDVLKARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLF
EYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVFHGKLLDGFFIRPFYKMMLGKQ
ISLKDMESVDSEYYNSLKWILENDPTELDLRFCIDEDNFGQTYQVDLKPSGSDMVVTNEN
KKEYIDLVIQWRFVNRVQKQMNAFLEGFTELILIDLIKIFDENELELLMCGLGDVDVNDW
RQHTVYKNGYCPNHPVIQWFWKVVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQ
LFTIEQWGTPDKLPRAHTCFNRLDLPTYESFEDLREKLLMAVENAQGFEGVD
NT seq 3039 nt   +upstreamnt  +downstreamnt
atggctgcgaattacgagccaatatatggactttcagaagatgagcatgaaacaagagtg
ctgcgggttaaggtcattgcaggaattgatctggcgaagaaagacatcattggagccagt
gatccctatgtcaaactttccctctatgttgcggatgaaaacagagagcttgccttagtc
caaacaaaaactattaaaaagaccctaaatcccaaatggaacgaggagttctacttcaga
gtgtgtccgcagaatcacaggctactctttgaggtgtttgatgagaacagattggcttct
tccaagaatgggcttttccatctcggacagaccagagatgatttcctgggtcaagttgat
gttcctctcagtcatttgccgacagaggaccccgccatggagcgtccctacacatttaaa
gacttcctcttgcggcccagaagtcacaagtccagggtgaagggttacctgcgtctgaag
atggcctatctgcccaaacaaggaggacatgaggaggaggctggagaaatgagagaggag
gctgaggggtgggatgagtctgcagactcaggctcccagcggccacagcagctgctgccc
ccattgcccccaggctgggaagagaaggtggacaacctggggcgcacctattacgtcaac
cacaacaaccgttctacacagtggaaacggccctccaacatggatgtgatttcagagact
gagagcgacaatcaacagcggcagatccatcaggaagcacaccgtgttttccgttcgaga
cgccacatcagtgaagaccttgaaaacgagcacctggagcccagggacatggacaattcc
tgggagctcatcacagaggaagattctaacgacagcttgtcccagtctctgcctgggccc
tcctccatcttgacaccacagcacccaccgacacctgtcacccgggagtttgctgaagat
ttgaatctgaggttgtcgctcacgcccgataccaacggcgaagtgccggggcccagctcc
gctttgagccagttgtcaaacagactccgttcctccagcatgacagatggcgtcagtgat
caggcccaggctcctcctcttacgcagagttcccagaccagaagaacaagagctcaaaca
gtctcaggtggtgaggagcctatgtctccctcggcgactgcttacaccttgaccacccct
ggcctgccccctggatgggaggagaggaaggacgccaagggaagaacttattacgtcaac
cataacaaccgcaccacaacctggactaggccaattgtgcagctaactgaagacggagcc
agcacctcagcagcagcagcagcatcatcaggaggagcctcggccctggcacccgcatcc
accccttcctcctcttccaatgcctccaacaaccacctccatgagccccaagtccgacga
cctcgtagcctcagctcccctactgtcaccctttccacccccttggagggagccaacaat
atccaggtacggagggctgtgaaggacacattctccaacccccagtctccccagccgtcc
ccctacagctcccctaaatcacagcacaaggcacagcagagcttcctgcccccaggctgg
gagatgaggatagcccccaatggacgacctttcttcattgaccacaacagcagaacaacc
acctgggaggatcccaggttgaaatatccagtccatatgaggaataagaactcaatggag
cctggtgaccttggtcctcttcctcctggatgggaagaaagagttcacacagatggacgc
accttctacattgaccacaatacaaagaacacacagtgggaggaccctcgcctgcagagt
ccagccatcacaggacctgctgttccctactccagagagttcaagcagaaatatgactac
ttcaggaagaaattgaagaaacctgctgacatccccaaccgattcgagatgaagctgcat
aggaacaacatctttgaagagtcgtaccgtcgcatcatgtccctgaagaggccggatgtt
ctaaaggcacggctgtggatcgagtttgagtcagagaaagggttggactacggcggtgtg
gccagagagtggttcttccttttatctaaggaaatgttcaatccttactatggcctgttt
gagtactctgccacggacaactacactctccaaatcaatcccaactctggcttgtgcaac
gaggatcacctctcctatttcaagttcatcgggcgtgtggcaggaatggctgtgtttcat
ggaaaactactggatggttttttcatccgaccgttctacaagatgatgctgggaaaacag
atctctcttaaagacatggagtctgtggacagtgaatactacaactctcttaagtggatt
ctggagaatgatcccactgagctggacctgaggttttgtattgatgaggacaactttgga
cagacgtaccaggtcgacctgaagcccagcggctcagacatggtggtcaccaatgagaac
aaaaaagaatacatagacctggtcatccagtggaggtttgtcaatcgggtccagaagcag
atgaatgccttcttggagggattcactgagctcattctcatagatctgatcaagatcttt
gatgaaaacgaactggagctgctcatgtgtggtctgggtgatgtcgacgtcaatgactgg
agacaacacactgtttacaagaatggctactgccccaaccatcctgttatacagtggttc
tggaaggttgtcctgttgatggatgctgaaaagagaatccgactcctccagtttgttacg
ggaacgtctcgagtgccaatgaatggctttgctgagctttatggttctaatggtcctcag
ctgttcacaattgagcagtggggaacaccagataagttgccaagagctcacacatgtttc
aaccgcctggatctgccaacctacgaatcatttgaagacctgagagagaaactcctcatg
gctgtggagaacgcacagggcttcgagggggtcgactaa

DBGET integrated database retrieval system