Lates calcarifer (barramundi perch): 108874388
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Entry
108874388 CDS
T04895
Symbol
cbx2
Name
(RefSeq) chromobox protein homolog 2
KO
K11451
chromobox protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108874388 (cbx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108874388 (cbx2)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
108874388 (cbx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chromo
CBX7_C
SR-25
Phenol_Hydrox
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
108874388
NCBI-ProteinID:
XP_018518344
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Position
LG11:complement(1704606..1710145)
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AA seq
531 aa
AA seq
DB search
MEELSAVGEQVFDAECILNKRLRKGKLEFLVKWRGWSSKHNSWEPQENILDPRLLAAFNK
KEQEKELLMRKRGKRPRGRPRKILENVPEAPKSSSSSSGSSSSSSDSSSSCSSSSSSSED
DDEDGSTKQASPSVRTRDTHPVPQKKAQIVVAKQEPPKKRSRKPLPPEVKEFQQNKGSRK
ILKTPQDTDLPGAIKKPVHPASFTFMGFHRGSVRDTVGSQNRSSLTQGGAVKNSMSSVGS
GRSVQPASLPLNKSVQSRNVTEGKLSISSMSSGASLDLKAAAGKSKGVAALNLNTSKHPI
QGTTQHTLSSPNGQKKPQGPVSTLQRIPNTKAMASVPLKNPSSSQGSGLQPLNLQSKPVQ
NNDAPGNGTTPAAGLRNATNPARKTTVTQNQEYNPPKSPATPGRPPARKNQPGADKVKEA
TEIQASRVQGRLDKSSVHKSTTEVQSQQERPAYKDGKKADMSTGEEESSSDSDQDSSYTG
QDRSMGVQNQDWKPTRSLIEHVFVTDVTANLVTVTVKESPTSVGFFSIRNY
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggaggaactgagcgccgtgggagagcaggtttttgatgcggaatgcattctaaacaaa
cgcctgagaaagggaaagttggagtttcttgtgaagtggaggggatggtcatccaaacac
aacagctgggagccccaggaaaacatcctcgacccaaggttgttggctgccttcaacaag
aaagagcaagaaaaggagctcctgatgcgtaagagagggaaaaggccaagaggaaggccg
cggaaaatccttgaaaatgtgcctgaagctccaaaatcgagcagctcttcatctggctca
tcatcctcatcctccgattcctcctcctcatgctcctcctcctcgtcctcatcagaagac
gatgacgaagacggcagcactaagcaggcaagcccgagtgtcagaacacgagacacccat
cctgtccctcagaagaaggcgcagattgttgtggcaaaacaggagcccccaaagaaacgg
agcagaaaacctctgccccccgaagtgaaggaatttcaacagaacaagggctctcgcaaa
atcctgaagacgccccaagatacagatctaccaggagcaatcaaaaagcctgttcatcca
gcaagcttcaccttcatgggtttccatcggggctcggtgagggatacagtgggtagtcag
aacaggagctctctgacccagggtggggctgttaaaaactccatgagctctgtgggatct
ggcaggtcagtccaacctgcctccctccctctgaacaaatctgtccagagcaggaatgtc
actgagggtaaactgtccatctccagtatgagcagcggggcaagcctggatttgaaagca
gctgctggtaaatcaaaaggggtagcggcgttgaatttgaatacatccaaacaccccatt
caaggaaccactcagcatacactaagctcccccaatggacaaaagaaaccccagggccct
gtgtcaacactgcagcggatacccaatactaaagcaatggcttctgtaccattgaagaac
ccctcctccagtcaaggttctggccttcagccactcaaccttcagagcaaaccggtgcaa
aataatgatgctcctggaaatggcactaccccagcggcaggcctgagaaatgcaacaaac
ccagcaaggaaaaccactgtcacacaaaatcaggagtacaatcctcctaagagtcctgca
actcctggaagaccaccagccagaaagaaccaaccaggagcagacaaggttaaggaagca
actgaaatccaagcctctagagtccaaggcaggctggacaagagcagcgttcataaatcc
accacagaagtccagagccagcaggagagaccagcctacaaagatggcaagaaagccgat
atgagtacaggtgaagaggagagcagctcagactccgaccaagattcttcctacaccgga
caggaccgctcaatgggggtccagaaccaggactggaagcccacacgtagtctgatagag
catgtgtttgtaacagatgtcactgctaatctagttactgtcacagtcaaggaatcacca
accagtgtgggcttcttcagcattcgcaactactga
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