Lates calcarifer (barramundi perch): 108874890
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Entry
108874890 CDS
T04895
Name
(RefSeq) GTPase IMAP family member 8 isoform X1
Organism
lcf
Lates calcarifer (barramundi perch)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIG1
MMR_HSR1
ABC_tran
AAA_24
DUF815
AAA
RsgA_GTPase
RHSP
Zeta_toxin
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
108874890
NCBI-ProteinID:
XP_050930796
LinkDB
All DBs
Position
LG13:26699035..26746089
Genome browser
AA seq
1026 aa
AA seq
DB search
MGGSSSSESSPPPPPPPSPPPPPPPSPPSPPSPEPLRHFLQALEIHADQASTIMMHRVIL
RRPLSSSSSEVFLSTSSDDDILSGLSGLPSSLITEDGPWGEAFLSEPPFCPFMEDEELDE
ELDEELDEDCLSDDDTASKRLRRLREEADSDYSRLLRETLRIVEEVNRKGKNLMEGFTDV
GFSELKMEMKTLKEKTSELKAQRSRLQSLIHPSSDDDILSGPPSPEIEDEDEDEEAEDED
DLSALRIVLVGKHDDKKSKLGNFILNCQVFQKHQKQLVATSREWKGKSLTVVKTQDVFSL
SVEAVREVMKSCVSLCRPGPNVLLLLVKPSDFTEENRKTLKFILSLFGQDAFRYSMVVIT
DKKSGTHSTVNQLIRDCGGRYYNMFESDHRVLMQKIENIVHENKGTFLTFTEETIRPKSE
HIKPSLNLVLCGRRGAGKTSAAKAILGQTELHSVSTSSECVKHQGEVCGRWVSLVELPAL
YGKPQEAVMEESFRCISLCDPEGVHAFILVLPVGPLTDEDKGELETIQNTFSSPVNDFTM
ILFTVESDPTAPAVVNFIKGKDIQELCQSCGGRSVVLNIRVKRQIQEMVNIVVKMSVGGP
RCFTKDMFTKAQMEKVSDLKAELQDVKQRTQSREPLRMVLIGKTGSGKSSTANTILGKKH
FKPRIPPKPTIKSCEKAAGDVDGRPVVVVNTPGLFDTTLSDDEIKQELQKCMTMLSPGPH
VFLLVLQIGNFTPEEKDSVELIKKYFGDKSRDFTIIIFTRGDELDDQSFQSYIKDCDDFV
KQLINDCGGRYQVFNNKDETNHTQVCELLNKMETMVEKNGGSCYTAEMFDDTEKSTLIQV
ERMMKEKEEEINEMKRKEEDLRRKHEEDLKTLKKKINEQRGEIELSAKQLKDRDECIKKA
CEERKKEREEDEKRRKKQEESLRQEWRGKLEASERRVQSEREQKETVERKLEQFRKEVKR
DREAWDKEKKDMWERMHQDLKQNLEEEKMSFRKLQEEYYRKRKKWTYCFFVLMLSLTLLL
YYVFQR
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgggaggttcatcatccagtgagtccagtccacctccaccacctccaccatcaccacct
ccaccacctccaccatcaccaccttcaccaccttcaccagaaccactacgtcattttctt
caagccttggagatccacgctgatcaagccagtaccatcatgatgcatcgcgttatactg
aggaggccactaagcagcagcagcagtgaagtctttctgtctacatcatctgatgatgac
attctttcaggactttcaggacttccaagctctctgattactgaggatggcccgtggggt
gaggcctttctttcagaacctccattctgtccgtttatggaggatgaggagctggatgag
gagctggatgaggagctggatgaggattgcttgtctgatgatgacacagcatcaaaacga
ctaaggaggctgagagaagaggctgattctgactattctcgactgctgagggaaacgttg
aggatcgtagaggaagtgaaccggaaaggaaaaaatctgatggagggctttacagatgtt
ggcttttcagaactgaagatggaaatgaaaacactcaaggagaaaaccagtgagctcaag
gctcaacgctcacgtctgcaatctctgatacatccatcatccgatgatgacattctttct
ggacctccaagccctgagattgaggatgaggatgaggatgaggaggcggaggatgaggat
gacctgtctgctctcaggattgttctagtgggcaaacatgatgacaaaaagtcgaagctt
ggtaacttcatcctaaactgtcaggttttccaaaaacaccaaaaacagcttgtcgccacc
agcagagagtggaagggaaaatcattaactgtagttaaaactcaagatgtcttcagtctg
tctgttgaagcagtgagagaagtgatgaagagctgtgtgagtctttgtcgtcctggacca
aatgttctgctgctgttagtgaaaccttctgatttcactgaggagaacagaaaaacactg
aagttcatcctgagtttgtttggtcaagatgcttttagatactcaatggtcgtcataaca
gacaagaagagtggaacacattcaactgtgaatcagctgattagagactgtggaggaaga
tactacaacatgtttgaaagtgaccacagagtgttaatgcagaagattgagaacattgtg
catgaaaacaaaggaaccttcctcaccttcactgaagagaccataagaccaaagtctgaa
cacatcaaaccatctttaaacctggttctgtgtgggaggagaggagcagggaagacttca
gcagccaaggccattttaggtcagacagagcttcattcagtctccacctcatcagagtgt
gttaaacatcagggagaggtgtgtggacgttgggtttccctggtggagctgcctgccttg
tatggaaaacctcaggaggcagtgatggaggaatcattcaggtgtatctccctctgtgat
cctgagggcgtccatgccttcatcctggtcctacctgtgggtcccctcactgatgaagac
aagggagagttagagaccatccagaacacattcagctctccagtcaatgactttaccatg
attctgttcactgtggagtcagatcctacagctccagctgttgttaactttataaagggc
aaagacatccaggagctctgtcagagctgtggaggaagatctgttgttctcaacatcagg
gtcaagaggcagatccaagagatggtgaacattgtggttaagatgagtgttggaggaccc
agatgcttcactaaggacatgttcaccaaggctcagatggagaaggtttcagacctcaaa
gctgaacttcaggatgtgaaacagaggactcagagcagagagcctctcaggatggtgctg
attgggaagactggcagtgggaaaagctcaacagcaaacactattttgggcaaaaagcat
ttcaaacccagaatccctccaaagccaacgatcaagtcttgtgagaaagcagccggagat
gtcgatggacggcctgttgttgtggtcaacacccctggtttgtttgacacaactctctct
gatgatgaaattaaacaggagcttcagaaatgtatgaccatgttgtctcctggacctcat
gtgttcttactggtgctgcagatcgggaactttacaccagaggaaaaagactcagtggaa
ctgatcaagaaatattttggtgataagtccagagatttcaccatcatcatattcaccaga
ggagatgaactggatgatcagtcatttcagagttacatcaaagactgtgatgactttgtc
aaacagctaataaatgactgtggaggaagatatcaggtctttaataacaaagatgaaaca
aaccacacacaagtctgtgagctgctgaacaagatggagaccatggtggagaaaaatggt
ggcagctgctacactgctgagatgtttgatgacacagagaaatccacactaatacaagtg
gagaggatgatgaaagagaaggaagaagagattaatgagatgaagagaaaggaggaagac
ctcagaagaaaacatgaggaagatttaaaaacactgaaaaagaaaattaatgaacagaga
ggagaaattgaactgagtgcaaaacagctgaaggacagagatgaatgtattaagaaagca
tgtgaggagagaaagaaagaacgagaggaagacgaaaagagacggaaaaaacaagaagaa
agtctgagacaggagtggagaggaaaactggaagcgtcagagagaagagttcagtcagaa
agagagcagaaggaaactgttgagaggaagctggagcagtttaggaaagaggtgaagaga
gaccgagaggcctgggataaagaaaagaaggacatgtgggaacgaatgcatcaggacctg
aaacaaaacctggaagaggagaaaatgagcttcagaaagctccaagaggagtactatcgt
aagagaaagaagtggacgtattgcttttttgtgctaatgttgtctttaacacttttatta
tattatgtatttcagaggtag
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