Lates calcarifer (barramundi perch): 108875131
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Entry
108875131 CDS
T04895
Symbol
shank3a
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
lcf
Lates calcarifer (barramundi perch)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SH3_2
SAM_2
Ank_3
SH3_9
Ank_5
PDZ_6
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
108875131
NCBI-ProteinID:
XP_018519335
LinkDB
All DBs
Position
LG10:complement(14974145..15140362)
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AA seq
1981 aa
AA seq
DB search
MPLRPAAGKHEPPSPPRQDQQQQQHHTHTHSHTLTHPYTHAANGSQGASTDSGSSREEDS
GVPDPVGVLAFRPGAQRSHSARAPMEEPTGNTVVIRIGIPDLQQTKCMKFNVDAPIWLSK
QRILCTLNQSLKDVLNYGLFQPAYNGKAGKFLDEERQLREYPFPSIAPVPYLEFRYKRRV
YTQTHLDEKQLSKLHTKANLKKFMEYVQQRNIEKVSRFLEKGLDPNFHDPDTGECPLTLA
AQLEGCAELIKVLKSGGAHLDFRTKDGITALHKAVRSKNHTALITLLDLGASPDYKDSRG
LTPLYHSSMVGGDPYCCELLLHDHAQVGCVDENGWQEIHQACRYGHVQHLEHLLFYGADM
STQNASGNTALHVCALYNQDSCARVLLFRGANKEIKNYNSQTAFQVAIIAGNFDLAEIIK
VHKASDVVPFRETPSYTNRRRVMPGSLPSPRSLLRSASDNNLNGDHDHIHSQTPREIRGR
QGHSPVPSLRSLPALGQQHSSLGESRHGEIPDSSLQSTGSSRSSHSRSPSLHHMHEEDKP
IPRRSHSHGYPHGHGPRGRLSPGSVQRDPSPPHHTPPALTGPRGPKRKLYSAVPGRTFIV
VKPYTPQGEGEIQLNRGERVKVLSIGEGGFWEGTVKGRTGWFPADCVEEVQMRQYDPRLE
TREDRTKRLFRHYTVGSYDNFTSYSDYIIEEKNAVLQKKENEGFGFVLRGAKAETPIEEF
TPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQVVSLIRQGGNRLL
MKVVSVTRKPESEEVVRKKAPPPPKRAPSTTLTLRSKSMTAELEELASARRRRGERLDEM
LASQESMLRAQPSEADYRAATVKQRPTSRRITPAEISSLFERQGMTLHGGLHPGIERGHI
PLPKGMSRTKSFGATEEDRLSALAGEHRFPRSSSMTDSLRDHSQPHPIPPPPQTAPPPPP
YYLDTGPPPAFCPPPPPSRTQSQGHEPGGRSSFKPSSLDLPYEAAQRQATHIERQKKARS
MIILQDSSHLPVEPTEIPRPSAATPPERIKRKGRVIDNPYANVGQFSIGLYTPTKPQRKK
SPLVKQLQVEDAQEKASLALAAAHSRESSPSGRHPHPHGHTHTSRADYYQQQLAAERERL
RAQGEMMFQGKGPFAAAIAGAVKDRERRLEERRKSTVFLSVGTMEGASATSSDSPSLTQS
HSIDERMLTRELGQLPPPALALSPSPSGTTFIHPLTGKPLDPNSPLALALAARERALTSQ
SQSPTSSPEPRTKQERAGQGIIFIDTQTKESPHEGAPTSPPFSPKSAKAAGYGVGSSPAS
VLVPQSTKPQWASSPSPVSFRQEMEARVEERKEEKRLEDKKSMLISIMDTSQQKTAGLIM
VHATSNGQAVGVGSELEQTPTPASMEPSKSPSPRAKSPSPTVSQPQPQLQAQPQTQRPAS
PAQEKSLAQGSSEEDVDPYTVTLPPVMLSSSDEETREELRKIGVVPPPDEFANGLLAQAQ
ETQVSPPKPATSPTATTTPTPQTLSTPTTPIVTPTQPQPPQPPPPPSAAAVSGKPSDPLE
PPPVGESGSAADSGVEEADTRSSSERERDHHLETTSTVSTVSSMSTLSSESGEPADTHTT
HTSYADGQTFVLDKPPVPPKPRLKSQIGGSKGPVTFRDPLLKQSSDSELLSQQQAAALAA
AAAGGAGLPSGGSASVTGLAPTKPRYLFQRRSKLWGDPVEPRGPGVGLGIGSLGNLGGLG
LGLGADEGAKPSVMGELSSRLQQLNKDTRSLGEEPLGASLDPGRKSPVAGARLFSSLGEL
HTISQRSYGTTYTIRPGSRYPITRRTPSPGSGSPDRGDPLGRFSGFGLPPSPTTPPQTIL
KSSSLSLPQEPKEVRFVMRSSSARSRSRSPSPSPSHSPGLGSPLLALRPFHQKPLHLWNK
YDVGDWLESINLGEHRAGFQEHEIEGSHLPALTKDDFAELGVTRVGHRMNIERALKQLLE
S
NT seq
5946 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgtccggcagccggcaaacatgagccacccagccctccacggcaggaccag
cagcagcagcagcaccacacacacacacactcacacacactcacacacccttacacacac
gcagcaaacggcagccagggggccagcactgacagcggcagctcccgggaagaggacagc
ggcgttcctgatcctgtcggtgttctggctttccgtcccggtgcacagcggagccacagt
gcaagagcacccatggaggagccgacaggcaacaccgtggtcatccgcattggtatccca
gacctacaacagacgaaatgtatgaaattcaatgtggatgctcctatctggctgtccaag
cagcggatcctgtgtactctcaaccagagcctgaaggatgtactcaactatggcctattc
cagccagcttacaatggcaaggctggcaaatttctggatgaggagagacagttaagggaa
taccccttcccatccattgcacctgtaccttacctggagttccgctataaaagacgtgtc
tacacccagactcacctggatgaaaagcagctgtctaagctccacacaaaggcaaacctg
aagaagtttatggagtatgtgcagcagaggaacattgaaaaggtctcaaggttcctggaa
aaaggcctggaccccaacttccatgatccagacacaggagaatgtcctttaacgctggca
gcacagctggagggatgtgcagagctcatcaaggtgttgaagagtggaggggcacatctg
gacttcagaacaaaagatggcattactgccctacacaaggctgtgcgcagcaagaaccat
acagcacttataacactgttggacttgggtgcatcacctgactacaaagacagtaggggg
ttgactcctctttaccacagctcgatggtgggaggagacccctactgctgtgagctgctg
ctgcatgatcatgcacaggtcggctgtgtggatgagaatggctggcaagaaatacaccag
gcatgccgctatggccacgtgcaacacctggaacacctgctgttctacggagctgacatg
agcacccagaatgcatctggaaacaccgccctgcatgtgtgtgccctctacaaccaggat
agctgtgcacgagttctcctgttccggggggccaataaagagataaagaactacaacagc
cagactgcttttcaggtggctattatagcaggaaactttgatctggctgaaatcataaag
gtccacaaagcatcagatgttgtgcctttcagggagaccccctcctacaccaaccgtcga
cgtgtgatgcctggctccctgccttcgccacgttccctgctccgctctgcgagtgacaac
aatctgaatggggaccatgatcacatccacagtcagaccccccgagaaattcgcggccgt
cagggtcactcccctgtcccctcgctgcgcagtctgccagctcttgggcaacagcacagc
agccttggagagagccgtcacggtgagatccctgacagcagtctccagagtacaggcagc
tccagatcctcccattcacgctcgccttcactacatcacatgcatgaggaggacaagcca
attcctagaaggtcccacagccatggctaccctcatggacacggccctcgtggaagactc
agccccggctcagtgcagcgagacccaagccccccccatcacacccctccagcgctgaca
ggcccccgcgggcccaaacggaaactctacagtgctgtcccaggacgtaccttcatcgtg
gtcaagccctacacaccacagggggagggagaaatccaactcaaccgtggagagagggtc
aaagtgctgagtataggagaaggaggattctgggaaggcacggttaaagggaggacaggc
tggttcccagcagactgtgtagaagaagttcagatgaggcagtatgacccacggctagag
actcgggaggaccgcactaagagactgttcagacactacactgtgggatcctacgacaac
ttcacctcatacagtgactatatcatagaggagaagaatgctgttttacagaagaaagaa
aatgaggggtttggctttgtcctgcggggagccaaagctgagacgcccattgaagagttc
accccaaccccagcattccctgccctgcagtacctggagtctgtggacgtggagggagtg
gcctggagggctggtctgagaacaggagacttcctcattgaggtgaatggggtcaatgta
gtgaaggtgggccataaacaggtggtgtccttgatccgacaagggggcaacaggctgctg
atgaaggtggtgtctgtcacacgcaaacctgagtctgaggaagtcgtacgtaagaaagct
cccccaccgcccaagagagctcccagcaccacactgacactgcgctccaagtccatgacc
gctgagcttgaagaactggcttctgctcggaggagaagaggagagagactagacgagatg
ttggcatcccaggagtctatgttgcgtgctcagccctcggaggcagattacagagcagcc
actgtcaaacaacggcctaccagcaggagaataacaccagcagagatcagttcactgttt
gagagacaagggatgactctacatggaggtcttcacccaggcattgagagaggtcacata
ccactaccaaaggggatgtccaggaccaagtcttttggtgccactgaggaggatcggctg
tctgcccttgcaggcgaacaccgatttccccgtagttcctctatgacagacagcctccga
gaccattcacagccgcatcccatccctccacctccacaaacggcacctcctcctccccct
tactacctagacactggtcctcccccagccttttgccctcctcctcccccatctaggacc
cagagtcagggccatgagcctggaggacgctccagcttcaagccctcctcgttggacctg
ccttacgaggccgctcaacgtcaggccacacacatcgagagacagaagaaagcacgctcc
atgatcatcctccaggactcttcccatctacctgtagaacctacagaaattccccgacca
tctgctgctactccacctgagcgaatcaaaaggaagggtcgggttattgacaacccttat
gctaatgtgggtcaatttagcattggactgtacacacccaccaagccccagaggaagaaa
agtcccctggtgaaacagctacaggtggaagatgcacaagaaaaagctagtttggcctta
gctgctgcccactcccgagagagctcaccctcaggacgacacccacatccccatgggcac
acacacaccagccgcgcagactactaccagcagcagctggcggctgagcgagagcgtttg
cgtgcccaaggagagatgatgtttcagggtaagggcccctttgctgctgctatcgctgga
gcagtcaaagatcgtgagcgtcgcctagaagaacggaggaaatccactgtcttcctttct
gttgggaccatggagggggcgtctgccaccagctctgactccccctctctgactcagtct
cactctatcgatgaacggatgctcactcgagagctgggacagctgcctccccctgccttg
gccctgagcccctcccctagtgggaccacctttatccatccactcacaggaaagcccctg
gaccccaactcaccactggctcttgcgctggccgcaagggagagggcactgacctcccag
agccagtccccaactagcagcccagagcctaggactaaacaggagcgggcaggccagggc
ataatattcattgacactcagaccaaagagtctccacatgaaggggcacccacatctccc
cctttctcgcctaaaagcgccaaggcagcggggtatggagttggatcctccccagcatca
gttttagttccccaatccaccaaaccacagtgggcctcatcaccgtcacctgtatcattc
cggcaggagatggaggccagagtagaggagaggaaggaggagaagagacttgaggataaa
aaaagtatgttgattagtattatggatacgtcgcagcagaagacagcggggctgatcatg
gtccatgccaccagtaatggccaggctgttggggtgggttcagaattagaacagacccct
accccagcttccatggagccaagcaaatctccaagtccacgggctaaatcccccagtccc
acagtctcccagccccaaccccagctccaggcccagcctcaaactcagcgtcctgccagt
ccagcccaagagaagagtctggctcagggaagctccgaggaggatgtggatccatataca
gtgaccctgccccctgtaatgttgtcctccagtgatgaggaaacaagagaggagctacgt
aagatcggagtcgttccgccaccagatgagtttgctaatgggctgctggcacaggcacag
gagacacaggtgtccccacctaaacctgccacctctcccacagccactacgacaccaaca
ccgcaaactctttcgaccccaacaaccccaattgtgacccccacacagcctcagcctccc
cagcccccacctccacccagtgcagcagctgtctcagggaagccctcagaccctctggag
cccccaccggtgggcgagtctggctctgcagctgactcaggcgtggaggaggctgacacg
cgcagctccagtgagagagaacgagaccaccatctcgagaccaccagcaccgtctccacg
gtttccagcatgtccacattgtcctcagaaagcggcgagcctgccgacacacacaccaca
cacacctcctatgccgacgggcagacttttgtgctcgacaagccgccagtgcctcctaag
ccccgactcaagtcccagataggaggcagtaaaggccccgtcaccttcagggaccctctg
ctgaagcagagctctgacagtgagctgctatcacagcaacaggctgctgccctggctgct
gctgcggctggaggagctgggctcccctccggtggttcagcctcagtgacaggactcgcc
cccaccaagccacgctacctctttcagcggaggtccaagctgtggggggacccagtggag
ccccgtgggccaggagttgggcttggtattgggagtttgggcaatcttggtgggctggga
ctggggctgggtgcagatgagggagcaaaaccatctgttatgggggagctcagttcacga
ctacagcagctaaataaagacactaggtcactgggagaggaaccactgggggcatcactt
gacccaggaaggaagtcacctgtggcaggtgccagacttttcagcagcctaggcgagctc
cacaccatttctcagagaagttatggcaccacatacaccatccgccctggcagccgttac
cccatcacccgacgcacccccagcccaggctcaggctcacctgatcggggcgaccctctc
ggacgattctcaggcttcggcctaccaccctcaccgaccacaccaccacaaaccatcctc
aaatcctctagcctcagcctaccccaggagcctaaagaggtccgctttgtaatgaggagc
tccagcgcccgctcccgctctcgttccccttccccatcaccctcccactcccctgggcta
ggatcgccacttttagccctccggcctttccaccaaaaacccctccacctctggaacaag
tacgacgttggagactggctggagagcatcaatcttggggagcacagagcagggtttcag
gaacatgagatcgaaggctctcacctcccagctctaaccaaggatgactttgcagaactg
ggagtgacacgagttggacatcgcatgaacattgaacgagcactaaaacagctgctagag
agctga
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