Lates calcarifer (barramundi perch): 108875254
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Entry
108875254 CDS
T04895
Name
(RefSeq) repulsive guidance molecule A
KO
K23096
repulsive guidance molecule A
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108875254
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Gene cluster
GFIT
Motif
Pfam:
RGM_C
RGM_N
BioG
Motif
Other DBs
NCBI-GeneID:
108875254
NCBI-ProteinID:
XP_018519560
UniProt:
A0A4W6CNK4
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Position
LG10:complement(13110345..13123440)
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AA seq
451 aa
AA seq
DB search
MQSPRERSEVRPRAGWMVMGKRGRPSALEVCRVLVVFLSLFPSVSLQCKILKCNSEFWAS
TSNSGPEEEFCTALRAYNSCVRRTARTCRGDLAYHSAQHGIEDLMSQHNCSKEGPTSQPR
ARTPLPPPPPPLPSDRDREPSDGPEVCHYERSLPRNTSPPNYTHCGFFGDPHLRTFGDDF
QTCKVEGAWPLIHNKYLSVQVTNTPVVPGSLATATSKLTIIFKNFQECVDQKMYHAETDE
LPAAFADGSKNGGDRHGANTLRVVEKVPGQHVEIQAKYIGTTIVVRQVGRYLTFAVRMPE
EVVNSVEEGDNQDLYLCLHGCPANQRIDFRNFRARAAEAHGAGRSRGSAGAQGFTYQSAK
AKCKERLPVEDLYFQSCVFDLLSSGDINFTMAAYYAFEDVKMLHSNSNRYHIFEKDAFMS
NAAQRGKDLLSLFLINLLAVLLWIECCTVHL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgccaagggagaggagtgaagtgcgaccccgagctggatggatggttatgggg
aaaagaggaagaccctcggcgcttgaagtgtgcagagtcctcgtcgtgtttctctcactc
ttcccgtccgtgagtctacagtgcaagatcctcaagtgtaactcagaattttgggcctcc
acctcgaactctggaccggaggaggagttttgcacagctcttcgagcgtacaacagctgt
gtacgccggaccgcacgtacctgcaggggcgacctggcctaccactcggcccaacatggc
atagaggatctaatgagccaacacaactgctccaaggaggggccaacatcccaaccacgc
gcccggaccccgcttcctcctccgccccctccgctcccgtccgacagggaccgggaaccc
tctgatggcccggaagtgtgtcactatgaacgcagtcttccacgcaacacgtcaccgccc
aactacacccactgtggcttcttcggagacccgcacctcagaaccttcggagacgacttc
cagacctgtaaggtggaaggagcctggccgctcatccacaacaaatacctgtctgtccag
gtgaccaacactcctgtggtgccggggtctttggccaccgccacaagcaagctgacaatc
atcttcaagaatttccaggaatgtgtagaccagaagatgtaccacgcagagacagatgag
ctgccagctgcatttgcagatggctccaagaacggaggcgatcggcatggagcgaacacc
ctgcgcgtggtggagaaggttcccgggcagcacgtggagattcaggccaagtacatcgga
acaaccatagtggtgaggcaggtgggccgctacctgacctttgccgtgcggatgccggag
gaggtcgtgaactctgtggaggaaggggataaccaggacctctacctgtgtcttcacggc
tgtccggccaaccaacgcatcgacttcaggaacttcagggctcgggcggcggaggcccac
ggcgcaggcagaagcaggggcagcgccggggcacagggcttcacctaccagtctgcgaag
gccaagtgcaaagagcgactcccagtggaggatctgtactttcagtcctgcgtgtttgac
ctcctctcctctggagacattaacttcaccatggcagcctactatgcctttgaggatgta
aaaatgctccactcaaatagcaacagataccacatctttgaaaaggatgcttttatgagt
aatgcagcacaaaggggcaaagatttactttctctcttcctcatcaacctcctggctgtc
ttattgtggattgagtgttgcacagttcatttatag
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