Lates calcarifer (barramundi perch): 108875366
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Entry
108875366 CDS
T04895
Name
(RefSeq) COUP transcription factor 2 isoform X1
KO
K08548
COUP transcription factor 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108875366
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lcf03310
]
108875366
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
108875366
Nuclear receptors [BR:
lcf03310
]
2. Hepatocyte nuclear factor 4 like
2F. COUP-TF like receptor
108875366
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
108875366
NCBI-ProteinID:
XP_018519760
UniProt:
A0A4W6CNR1
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Position
LG10:13384969..13395391
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AA seq
423 aa
AA seq
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MAMVVWRGSQDDVADTQGTLSSQTQGGLSLPTPQPGQLNLTASQVAPPTPQTPVQGPPNN
TQSTPTNQTTQQSEKQPQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRA
NRNCPIDQHHRNQCQYCRLKKCLKVGMRREVSLFTAAVQRGRVPPTQPHHGQFALTNGDP
LHCHSYLSGYISLLLRAEPYPTSRYGSQCMQPNNIMGIENICELAARMLFSAVEWARNIP
FFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDH
IRIFQEQVEKLKALHVDSAEYSCLKAIVLFTTDACGLSDVAHVESLQEKSQCALEEYVRS
QYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSFNWPYM
SIQ
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggtagtgtggagaggctcccaggacgatgtggctgacacccaaggcaccctt
tcctcgcaaacccaaggaggactatctcttcccacccctcaaccaggccagttgaatctg
acagcctctcaggtcgcccctccgacccctcagactccggtccaaggacccccgaacaac
acacagtccacgccgacgaaccagacgacgcagcagtcggagaaacagccacagcacatt
gaatgtgtggtgtgcggggataaatctagtggcaaacactatggccagtttacttgcgag
gggtgcaaaagcttcttcaaacggagcgtacgacggaacctcacttacacatgccgtgcc
aacaggaattgtccaatcgaccaacaccaccgcaatcagtgtcagtactgccgcctcaaa
aaatgccttaaagtcggcatgagacgggaagtttctctttttactgcagccgtgcaaagg
ggacgggtgccacccacacagccacaccacggtcagttcgccttgacaaatggagaccca
ctccactgccattcctacttatccggatatatctctcttctgttgagagcggagccctac
ccgacgtcccggtatggcagtcagtgcatgcaacccaacaacataatgggcatcgagaac
atttgtgaactagcagccaggatgctcttcagtgccgtggagtgggccaggaatattccc
ttctttccagaccttcagatcacagaccaggtggctctgctgaggttgacgtggagtgag
ttatttgtgctcaacgccgcgcagtgctccatgcccctgcatgtggctcctctcctggcg
gcggctggccttcacgcctcccccatgtctgcggacagagtggtggcctttatggaccac
attaggatcttccaagaacaagtggaaaagctcaaagctttgcacgttgactctgccgaa
tatagctgcttaaaggcaattgtgctcttcaccacagatgcttgtggcctctcagatgtg
gcccatgtggaaagtttgcaggagaagtcccagtgcgccctggaggaatatgtccggagc
cagtatcccaaccagccaacacggtttgggaagttgttactccgcttgccttccctccgc
acagtctcttcctcggtcatagaacaattatttttcgtccgattggtaggtaaaacccca
attgaaactctcatcagggatatgttgctttcggggagcagttttaactggccttacatg
tcaattcagtaa
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