Lates calcarifer (barramundi perch): 108876161
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Entry
108876161 CDS
T04895
Symbol
nova2
Name
(RefSeq) RNA-binding protein Nova-2 isoform X1
KO
K14944
RNA-binding protein Nova
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108876161 (nova2)
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108876161 (nova2)
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KhpA-B_KH
KH_2
Motif
Other DBs
NCBI-GeneID:
108876161
NCBI-ProteinID:
XP_018521021
UniProt:
A0A4W6CYT7
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Position
LG21:21087657..21172131
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AA seq
519 aa
AA seq
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MMAGGAVQQNGIFSNPHHHNQQPHMESDPPDSRKRPLETPTEASSTKRTNTGVAFLQPLF
ETEGIVFPHQETETHEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD
FYPGTTERVCLIQGTVEALNGVHDFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQA
KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAV
EIIVQKIQEDPQSSSCLNISYSNITGPVANSNPTGSPYANSTEVMPAAAAAAAATASSLL
GQAGLAGVGAFPTTMSSLSGNDLLAITSALNTLASYGYNTNSLGLGLNPAAASGVLAAVA
ANANPAAAAAANLLASYASDASTSAAHPAAGLGGFSLGSLAAATGATNGYLSAASPLVAS
SLLATEKLAEGAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTR
NRKVTITGSQAATQAAQYLISQRITYEQGVRATNPQKVG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgatggccggcggagcagtacagcaaaacgggattttttcaaatcctcaccatcacaat
caacaaccacacatggagtccgatcccccggactcgcgtaaaagacccctggagactccc
acggaggccagcagcaccaaacgcacaaacacgggagtggccttcctgcagcccctattt
gaaactgaaggcattgtattccctcaccaagaaactgagactcatgaggaaggggagtac
ttcctgaaggttttgattcccagctatgcggcgggttcgatcatcgggaagggaggccag
accatcgtccagctgcagaaagagactggagccaccatcaaactgtccaaatccaaagac
ttctaccccggaacgacagagcgggtgtgcctgatccaggggacggtggaggctttgaac
ggcgttcatgatttcatcgctgagaaggtgagggagatgcctcagagcacccagaagaca
gagccggtcagcatcctgcagccacagaccaccgtcaacccagaccgtgtcaaacaggcc
aagctaatcgtccccaacagcacagcagggttgatcattggtaaaggtggagctacagtc
aaggccgtgatggagcagtccggggcgtgggtccagctgtcccaaaagccagagggcatc
aacctgcaggagcgtgtggtcaccatcagcggggagcctgagcagaatcgcaaagctgtg
gagatcatcgtccagaagatccaggaggacccacagagttcctcctgcctcaacatttcc
tactccaacatcacagggccagtcgccaactccaaccccactggctccccatacgctaac
tcgaccgaggtcatgccagctgcggcagccgctgcagcagccacagcctcctctctgctc
ggccaggcgggcctggcaggagttggggccttcccaaccaccatgtccagcctctcaggc
aacgatttgttggccatcacctcagccctcaacactctggccagctacggttacaacacc
aattccttgggcctggggctgaacccggctgcagcctcaggagtgttagccgctgtagca
gctaatgctaacccagctgccgccgccgcagctaatttgctagcatcctacgccagcgat
gcatccaccagcgccgctcaccctgcagccggtctcggaggcttctcactgggatccctg
gccgccgctacaggtgccaccaatggctacttaagcgctgcatcaccactagtggcgtca
tctctactggccacggagaagctagcagagggagcaaaggaagtggtcgagatcgccgtg
ccagaaaacttggtgggagccatcctggggaaaggagggaagacgctagtggagtaccag
gagctgaccggtgccaggatccagatctccaagaaaggcgagttcatccctggaactcgg
aacaggaaggtgaccatcacaggttcccaggctgccacacaggctgcacagtacctgatc
agccagcgaatcacctacgagcagggggtacgcgccaccaacccacagaaggtgggctaa
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