Lates calcarifer (barramundi perch): 108876512
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Entry
108876512 CDS
T04895
Symbol
sdk2b
Name
(RefSeq) LOW QUALITY PROTEIN: protein sidekick-2
KO
K16353
protein sidekick
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108876512 (sdk2b)
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
Sidekick 1/2
108876512 (sdk2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
Ig_2
Pur_ac_phosph_N
ig
V-set
Ig_C17orf99
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
108876512
NCBI-ProteinID:
XP_050922483
LinkDB
All DBs
Position
LG23:complement(5376069..5608174)
Genome browser
AA seq
2203 aa
AA seq
DB search
MLEDFWSRSMWRATWILFFSLLIQSTRAQDDVPPYFKTEPVRSQLHLERNRLVLTCMAEG
SWPLEFKWIHNTTELTRFSLEYRYLIPSLDRSHAGFYRCIVRNRVGALLQRRTEVQVAFM
GSFEEGERTQSVSQGEGAVIPAPRIRSFPQPQVTWFRDGRKIPPSSRIAITLDNTLVILS
TVAPDAGRYYVQAVNDKNGENKTSQPITLSVENVGGPADPIAPTIIIPPRNTSVVTGTSE
VTMECVANARPLIKLSISWRKNGVLVTSGLSDFNRRLTILSPVVSDSGYYECEAILRSSS
VPSVSAGAYLHVLEPPQFIKEPEKHITAEMEKVVDIPCQARGVPQPDIVWYKDALPIDPV
KTPRYRVLVGGSLQVNGLLPDDTGMFQCFARNLAGEVQTNTYLAVTSIAPNITAGPSDST
VIDGMSVILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLESGSLLISPSHISDAGT
YTCMASNSRGIDEASADLVVWARTRITTPPQDQSVIKGTKAIMTCGVTHDPSVTVRHVWE
KEGTVINVQSIPRMRLDADGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHA
PENPTAMLSTSEKRAIDLAWAKPFDGNSPLIRYILEVSENNAPWAILLANIEPESTAVTV
NGLIPARSYQFRLCAVNDVGKGQFSKETERVSLPEESPSAPPQNVIASGRTNQSIMIQWQ
PPPESHQNGILRGYTIRYRLTGLPVDYQIKNISSPDVTNLLLEDLIIWTNYEIEVAAYNG
AGLGVFSHKVTEWTLQGVPTIAPSNVQAEAVNSTTIRFTWTAPNPQFINGINQGYKLLAW
EPGKEEQVTMVTVRPNFQDSIHVGYVTGLKKFTEYYTSVLCFTTPGDGPRSPPKALRTHE
DTPGAVGHLSFTEILDTSLKVSWSEPGEKNGVLTGYRISWEEYNRTNTRVTHYLPNVTLE
YRVTGLTALTTYTIEVAAMTSKGQGQLSSSTISSGVPPELPGPPTNMAISNIGPRSVTLQ
FKPGYDGKTSISRWQVEAQVGVVGETEDWVMVHQVSNEPEARSLEVPGLNPYTFYRFRMR
QVNIVGTSPPSQPSRRIQTLPAPPDMAPANVTLRTASETSLWLRWMPLPEWEYNGNAEQV
GYRVQYSRAGSQGRALTHVIADRLEREFTIEDLEEWTEYEVRVQAVNGIGMGPWSQPVRG
RTRESVPSCGPTNVSAFATTSSSILVRWFEVPEPDRNGLILGYKVVYKEKDSDSAVHFWT
VEGNATHSVQLTGLGKYVLYEIQVLAFTRIGDGRPSSPHILERTLDDVPGPPVGILFPEV
RTTSVRLIWQSPSQPNGIILAYQITYHLNSTNSNTATVDVLSPSARQYTVTNLKPESIYV
FRITAQTRKGWGEAAEALVVTTEKRARPQPTSRPVVPQKDVQARQVLLSWEPGSDGLSPV
RYYTVQLRELPESNWTVHSASVNHEATSYIVSRLKPFTSYQFRVKATNDIGDSEYSEESE
AITTLQDAPDEPPTILSVTPHTTTSVLIRWQPPSEEKINGILLGFRIRYRELLYDRLRSY
SIHTINSVSTWAELTAPYSIRNLSDSTLTQYELDKLSKHKRYEIRMSVYNAVGEGPTSSP
QEVFVGEAVPTAPPQNVAIQSATATQLDVTWDPPPVDAQNGDIQGYKVYFWEFQRKNETE
RLRTLFMPEGGVKLKNLTGYTTYMISVAPFNAAGDGPRSPPTRGRTQQAAPSAPSFIHFS
ELTTTSVNVSWGEPTFPNGIIEGYRLVYEPCMPVDGVSKTVTVDVKGSGPLWLKLRDLAD
GATYNFRIRAKTFIYGPEVEANITTGPGEGAPGPPGEPFITRYGSALTIHWTAGDPGRAP
ITRYVIEARPSDEGLWDILIKDIPKEATLHTFNMDILKQGVSYDFRVIGVNDYGYGSPSL
PSPSISAQKVAPFYEEWWFLVVVALVGLIFILLLVFILIIRGQSKKYAKKSESGNNSNCN
ALTHGDMVSLDEGRFPALELNNRRLSVKNSFCRKNGVYTRSPPRPSPGSLHYSDEDVSTK
YNDLIPAESSSLTEKPSEISDSQGSDSEYEVDPNRQKTHSFVNHYISDPTYYNSWRRQQK
GISRAQAYSYTESESGDPDHCAPPPLPPLPPLPPQLSSPSPQPQQAQGQPQGQGSLFRPK
GSRTPTPSQQSSNPPSQHSTLYRPPSSLAPGSRAPIAGFSSFV
NT seq
6612 nt
NT seq
+upstream
nt +downstream
nt
atgttggaggacttctggagcagatcgatgtggcgcgccacatggattttatttttctcc
ttactcatccaatccacgcgagctcaagatgacgtgcctccctacttcaagacagagccg
gtgcgtagtcagctccacctggaacgcaacaggctggtgcttacctgcatggctgagggg
agctggccactggagtttaaatggatccacaacaccacagaattaacacgcttctcacta
gagtacaggtacctaatcccttcactggaccgctcccatgctggattctaccgctgcatc
gtcaggaatcgggtgggagcccttctacagaggcgcacagaagtacaggtggcctttatg
ggcagttttgaggaaggtgaacgcacccagtcagtctcccagggagagggcgctgttatc
ccagcaccgcgcattcgtagtttcccccaaccacaagtcacctggttcagagatgggcgc
aagattccacccagcagtcgcattgccattactctggacaacactctggttatcctgtct
acagtggcaccagatgctgggcgctactatgtccaagcagtaaatgacaagaacggagag
aacaagaccagccagcccatcaccttgtcagtggagaatgttggaggtccagcagatccc
attgctcccaccatcatcatccctcccaggaacactagcgtggtcacaggaacctcagag
gtcacaatggagtgtgtggccaacgccagacctcttatcaagctgagtatctcttggcgt
aagaacggcgtgttggtgaccagcggtttgagcgactttaaccgcaggcttactattctc
agtcctgtggtgagtgactctggctactatgagtgtgaggccattctccgcagcagcagt
gtgccttcagtcagtgccggggcttatctgcatgtgctagagccaccacagtttataaag
gaaccagagaaacacattacagctgagatggagaaggtggtggacatcccttgtcaggca
cggggagtgccccagccagacatcgtgtggtacaaagatgccttgcctatcgacccagtg
aagacgccccggtacagggtgctggtgggaggcagcctgcaggtcaacggcctccttcct
gacgacactgggatgttccagtgcttcgccagaaatttggcaggagaagttcagaccaat
acatacttggctgttaccagcattgcccccaatatcacagccggaccctccgacagcaca
gtgattgacggcatgtcagtcatcctgcactgcgagacctctggtgctccgagaccggct
atcacctggcagaaaggtgagcgcgtgttggccagcggttcagtccagctgcccaggttc
accctgctggagtcaggcagccttctcatctccccctcacacatctcagatgctgggacc
tacacttgcatggcaagcaactccaggggcatcgatgaggcatccgctgacctcgtggtc
tgggctcgcacccggattaccaccccaccacaggaccagagcgttatcaaaggaaccaaa
gccattatgacctgtggagtcacacatgaccccagtgtaactgtcaggcatgtctgggag
aaagagggaacagttatcaacgttcaatccattcctcgcatgcgactggatgcagatggc
accctccacatctcccaaacctggtcaggcgacataggcacgtacacgtgcagagtcacc
tccgttggtggaaacgactcccggagcgcacacctccgtgtcaggcagctgccccatgcc
ccagagaaccctacagccatgctgagcacatctgaaaaaagagccatcgacctggcctgg
gccaagccttttgatggcaacagtcccctcatacggtacatcctggaggtttctgagaac
aacgccccatgggccatcctgctggccaatattgagccagagtccacagcagtgacggtc
aatggcttgatcccggcacgctcctatcagttccgcctctgtgccgttaatgatgtgggg
aaggggcagttcagcaaggagacagagcgtgtctctcttccagaggagtcccccagtgct
cctcctcagaatgtcattgcaagtggtcggaccaaccagtccatcatgatccagtggcag
cctcctccggaaagccaccagaacggcatcctcagggggtacaccatccggtaccgcctc
actgggttgcctgtggactaccaaatcaagaacatttccagcccagatgtgaccaacctg
ctgctggaggacctcattatctggactaactatgagattgaggtggctgcctacaacggg
gcaggtttaggcgtttttagccacaaggtcactgagtggaccctgcagggagtgcccacc
atcgcccccagcaacgtacaggccgaggcggtcaactcgacaactatccgtttcacgtgg
acagcccctaaccctcagttcatcaacggcatcaaccagggctacaagttgctggcctgg
gagcctggcaaagaagagcaggttactatggtaaccgtgcgaccgaacttccaggacagc
atccatgtgggatatgtgacaggcctgaagaagttcactgagtattacacctctgtgctg
tgtttcactacacccggagacggcccccgcagcccgcccaaagcattaaggacacatgag
gacacccccggtgctgtgggtcacctgagtttcaccgaaatcctggacacctcactcaaa
gtcagctggagtgagcctggagagaagaatggagttctcacaggttatcgcatttcatgg
gaagaatacaaccgaacaaacaccagagtcacccactacctgccaaatgtcaccctagag
tacagggtcaccggactcactgctctcaccacctacaccattgaagtggcagctatgacc
tccaagggccagggccagctgtcctcctccaccatctcctctggagtcccaccagagctt
cctggccctcctaccaacatggcaatttccaacatcggcccacgctctgtcaccttgcag
ttcaaacctggttatgatggcaagacttccatttcccgctggcaggtggaggcgcaggtg
ggtgtagtaggagaaactgaggactgggtgatggtccaccaggtgtccaacgaacctgaa
gctcgctctttagaagtacctggtctcaacccatacaccttctacaggttccgtatgcgt
caggtgaacatagtgggcaccagtccacccagccagccctccagaaggatccagacccta
ccggctcctcctgacatggccccagccaacgtcaccctgcgcaccgctagcgagaccagc
ctctggttacgatggatgcctttgcctgaatgggaatacaatgggaatgcagagcaggtg
ggctacagagtccagtactctcgcgctggctcacagggcagggcgctgacccacgtcatt
gccgatcgtctggagagagagtttaccatcgaggacctggaggagtggacggagtacgag
gtcagggtccaggctgttaatggcattgggatgggaccctggagccagccggtcagaggc
aggaccagggagtctgtcccctcctgtggacccaccaacgtgtctgccttcgccactacc
tcgagcagtatcctggtgcgctggtttgaagttcctgaaccagacagaaatggtctaatt
ttgggctacaaggtggtgtacaaagagaaggactctgacagtgcagtccacttctggaca
gtggaggggaatgccacccatagtgtccagctgactggtctggggaaatacgtcctctac
gagatccaggttctggctttcacacggattggagatggacggcccagctctccacacatc
ctggagaggactttggatgatgtgccaggaccaccggtgggtatcctgttccctgaagtg
cggaccacctcagtccggcttatttggcagtctccctcacagcccaatggcattatactt
gcctaccagatcacgtaccacctcaactccaccaatagcaacacagccacagtggacgtg
ctgagccccagcgctcgccagtacacagtgaccaacctcaagccggagtccatctatgtg
ttccgcatcacagcacagacaaggaagggctggggcgaagctgccgaagcactggtggtc
accacagagaaaagagctcgtccccagcccaccagccgtcccgtggttcctcagaaagac
gttcaggcccgccaggttttgctgtcgtgggagccaggcagtgacggcctgtcccctgtg
cgttactacacggtgcagcttagagagcttcctgagagcaactggacagtccactctgcc
tccgtcaaccatgaggccacctcctacatagtatccaggctgaagccctttacatcctac
cagttcagagtgaaagccaccaatgacatcggggacagtgagtacagcgaggaaagtgag
gcgataacgactctacaggatgcgcctgatgaaccccccacaatcctctctgtcacgccg
cacacaacaacgtcagtgctgatccgctggcagcccccctctgaggagaagatcaatgga
atcttgctgggctttcggattcgataccgtgagctgctgtatgaccgtctccgtagttac
tccattcataccatcaatagtgtgtctacctgggctgagctcactgccccctacagtatc
cggaatctaagtgactcaactctgacccagtatgagttggacaaactaagtaaacacaag
cgctatgagattcgcatgagtgtatacaatgctgtgggcgaggggccaaccagctcacca
caggaggtgtttgtgggagaagcagtgcccacagctccaccccagaatgtggccattcag
tctgcaacagccacccagctggacgtgacgtgggaccccccacctgtggatgcacagaac
ggagacatccaaggctacaaggtttacttttgggagttccagcgtaagaatgagacagag
cggctacggaccctgttcatgcctgagggaggggtgaaactgaagaacctgactggatac
accacgtatatgatcagtgtggcccccttcaatgctgctggggacggaccccgcagccca
ccgaccaggggacgcacccagcaagcggctcccagcgcacccagcttcattcacttcagt
gagctgaccaccacctcagtcaatgtgtcctggggcgagcccacattccctaacggcatc
attgagggctaccgtctggtctatgaaccctgcatgccggtagatggcgtcagtaagaca
gtcacggtggacgtgaaggggagcgggcccctctggttgaagctcagagacctggccgac
ggtgccacgtataacttccgcatccgggccaagaccttcatctacgggcccgaggtggag
gccaatatcaccaccggcccaggagaaggagccccaggaccccccggagagccatttatc
acacgctatggttcagccctgaccatccactggaccgctggggacccaggacgtgctccc
atcacacgctacgtcatcgaggccagaccttcagatgagggattgtgggatatcttaatc
aaggacatccccaaggaagcgacattacatacattcaacatggatatcctaaagcaaggg
gtcagttatgatttccgtgtaattggagtgaacgactacggctatggttctcctagtcta
ccgtctccttctatatctgcccaaaaagtggcgccattctatgaagagtggtggttcctg
gttgtcgtggcactggtggggctcatcttcatcctgcttctggttttcatcctcattatc
aggggacagagcaaaaagtacgccaagaagtctgaatcaggtaacaactccaactgtaac
gctctgacccacggagacatggtcagcctggacgaaggacgtttccccgctctggagctc
aacaaccgacggctgtctgtgaaaaactctttctgccggaagaacggcgtctacaccagg
tctcctcccaggcccagtccaggcagtcttcactattccgacgaagatgtcagcacaaag
tacaatgacctgatccccgcagagagcagcagcctgactgaaaaaccctctgaaatctct
gactcacagggcagtgacagcgagtatgaggtggaccccaaccgacagaagacccactcc
tttgtcaaccactacataagcgaccccacctactacaactcttggcgccgccaacagaaa
ggcatatcccgggcgcaggcgtacagctacactgagtctgagtcgggtgatccagatcac
tgcgccccgccgccgctgcctcccctacctcccctgccaccccagctcagttcaccaagc
ccccagcctcagcaggcccagggtcagccccagggccagggcagcctgtttaggcccaaa
ggtagccggactcccaccccttcgcagcagagctccaacccccccagccagcacagcacc
ctctacaggccccccagcagtctagctccaggctcgcgggcccctattgctggcttctcc
tcctttgtgtga
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