Lates calcarifer (barramundi perch): 108878541
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Entry
108878541 CDS
T04895
Symbol
nr5a1a
Name
(RefSeq) steroidogenic factor 1a
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108878541 (nr5a1a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lcf03310
]
108878541 (nr5a1a)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
108878541 (nr5a1a)
Nuclear receptors [BR:
lcf03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
108878541 (nr5a1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108878541
NCBI-ProteinID:
XP_018524879
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Position
LG13:21757523..21776071
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AA seq
486 aa
AA seq
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MLGDKAHGVTLKVMEYSYDDDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRY
TCAENQECKIDKTQRKRCPFCRFQKCLSVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQ
QKKALIRSSGFKLESAAPPPASPMQTDYSFTGSLHNLPTISKSLLPSSPNSITPTDYEAN
LYGPPSLGMAMQSHVPLTTQYQYTAFPGRAIKAECPDYTSSPESLTGYPYPDMYPSVSPQ
PHSLPPLVLELLRCDPDERVVQNKIVAHLQQEQGNRGRLDKPSTFSLMCRMADQTLFSIV
EWARSCIFFKELRVGDQMKLLHNCWSELLVLDHIFRQVQHGKEDSILLVTGQEVELSSIL
SQAEATLSSLVQRGQELAARLRSLQVDRREIACLKFLLLFNPNVKLLENQAFVEGVQEQV
NGALLEYTLSTYPQFQEKFSQLVVRLPELRSLSTQAEDYLCYMHLSGEVPCNNLLIEMLH
AKRACV
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgttgggagacaaggctcacggtgtgactctgaaggttatggaatactcatatgatgat
gacctggaagagctgtgtcctgtgtgtggagacaaagtgtccggataccactatggcctg
ctgacctgtgagagctgcaagggcttcttcaagaggacggtgcagaacaacaagcggtac
acatgtgcggaaaaccaagagtgtaaaatagacaagacccaaaggaagagatgtcctttc
tgtcgcttccaaaagtgtctcagcgtcgggatgagattagaagcggtgcgtgcagaccgc
atgcgtgggggaaggaataaatttggtcccatgtacaagagagaccgggccttgaagcag
cagaagaaggctttgatacgatccagcgggttcaagctggagagtgcagctcctccacca
gcctctccgatgcaaaccgactatagcttcactggctctctgcacaacctccccaccatc
tctaaaagcctgctcccctcctccccaaactccatcacccccacagactatgaggccaac
ctctacggacccccttcactgggcatggccatgcagtcccacgtgcccctcaccacccaa
taccaatacacagccttccctggcagggcaattaaagcagagtgtcccgactacaccagc
tcccctgagtctctgacaggatacccctacccagacatgtacccctcagtgtcgccgcag
ccgcacagcctgccgccgctggtgctggagctgctccgctgtgatccagatgaacgggtg
gtgcagaataagattgttgctcatctgcagcaggaacagggcaaccggggccggctagac
aagcccagcaccttcagcctaatgtgtcgcatggcagaccagaccctcttctccatagtg
gagtgggctcggagctgcatcttcttcaaggaactgagggtgggagaccaaatgaaactg
ctccataactgctggtcggaacttctggtcctggatcacattttcagacaagtgcaacat
ggaaaggaagacagtatcctgctggtgactggccaggaggtggagctgtcgtccatcctg
tcccaagctgaggcaactctgtcgagtctggtacagagaggtcaggaactggcagcgagg
ttgcggtcactgcaagtggaccgcagagagatcgcctgtctgaaattcctcctcctgttc
aaccccaatgtgaagctgttggagaatcaggcattcgtggagggcgtccaggagcaggtg
aatggggctttgctggagtacaccctgtccacctaccctcaattccaggaaaagttcagc
cagctggtggtgcggctgccggagctgcgctccctcagcacacaggccgaggactacctg
tgctacatgcatctgagcggagaggtgccttgcaacaacctgctcattgagatgctgcat
gccaaacgagcgtgtgtgtga
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