Lates calcarifer (barramundi perch): 108878699
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Entry
108878699 CDS
T04895
Symbol
nr6a1a
Name
(RefSeq) nuclear receptor subfamily 6 group A member 1-A
KO
K08561
germ cell nuclear factor
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108878699 (nr6a1a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lcf03310
]
108878699 (nr6a1a)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 germ cell nuclear factor
108878699 (nr6a1a)
Nuclear receptors [BR:
lcf03310
]
6. Germ cell nuclear factor
6A. Germ cell nuclear factor receptor
108878699 (nr6a1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108878699
NCBI-ProteinID:
XP_018525159
UniProt:
A0A4W6G4T6
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Position
LG13:21658242..21737434
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AA seq
492 aa
AA seq
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MEIEKRTNGFDYPERNNAKSVNGFYSDHPLESEQRDSMDVINESNLDDPADQRTCLICGD
RATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCEMSRKQRNRCQYCRLLKCLQMGM
NRKAIREDGMPGGRNKSIGPVQITEEEIERIMSGQEFKEDAPEHTWGNNGDSDHSSPSNG
ASEGNQPSPASTLSSNRSVEMNGYTAALRDQYINTSMSTHYQLLPHLFSYAAQSGLLAPQ
PRSLYPQSHPLVLQLVAAEDLAPLATPMLIEDGYKVTQVELFALLCRLADELLFRQISWI
KKLPFFCELSIEDYTCLLSSTWQELILLSCLTIYSAQIFGDLADVTAKYTPSDDELQGFS
EDGMEVMERLIYLFRKFHQLKISNEEYACMKAINFLNQDIRGLSNTSQLEQLNKRYWYVC
QDYTEYKYPHQPKRFPEIMMCLPEIRCIAGKLVNVPLEQLPLLFKAVLHSCKSSLTSYRT
GPLPCVNTSTGN
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggagatagagaagaggacgaatgggtttgactacccggagagaaataacgccaagtcc
gttaacggcttttacagtgaccatccattggagtctgaacagagggacagcatggatgtc
atcaatgaaagtaatctagatgatccagctgaccagcgtacttgtcttatctgtggagat
cgtgccacaggcctgcactatggcatcatctcctgtgaaggctgcaagggcttcttcaag
cgcagcatctgcaacaagcgtgtgtaccgctgcagccgtgacaaaaactgtgagatgtcg
cgtaagcagcgcaaccgctgccagtactgccgtctgctcaagtgtctgcagatggggatg
aaccgcaaagcaatcagggaggatggcatgccaggagggaggaacaaaagcattgggcct
gttcagatcacagaggaggagattgaacggatcatgtcagggcaggagttcaaggaggat
gccccagagcacacctggggcaacaacggcgacagcgaccacagctctcccagcaacggt
gcctctgagggcaaccagccgtcacctgcctccactctgtcatccaatcgctctgtggaa
atgaacggctacacggcagccctcagggaccagtacatcaacacctccatgtccacacac
taccagctcctgcctcacctgttcagctacgccgcccagtctggcctgctggccccccag
ccccgcagcctctacccacagtcccacccattggttctgcagctggtggctgcggaagac
ctggccccactggccactcctatgctcatagaagacgggtacaaagtgacacaggtggaa
ctgtttgccctgctgtgtcgcctggcagatgagttgctcttccgccagatctcctggatc
aagaaactgccgttcttctgtgagctctccatagaggactacacctgcctcctcagctcc
acctggcaggagctcatcctgctctcctgcctgaccatctacagtgcccagatcttcgga
gacctggctgatgtcactgctaagtacacaccttctgatgacgagttgcagggcttcagt
gaggacgggatggaagtcatggagaggttgatatatctgtttcgcaagttccaccaattg
aagatcagtaatgaagagtatgcctgtatgaaagccatcaacttcctcaaccaagatatc
agaggactgtccaacacctcccagcttgagcagctgaacaagcgctactggtatgtgtgt
caggactacactgagtataagtacccgcaccagcccaaacgcttccctgagatcatgatg
tgtctgccggagatccgctgcatcgcagggaagctagtgaatgtccctctggagcagctc
cccctcttgtttaaagcagtcttgcactcctgcaaatccagcctgaccagctacaggacc
ggcccattgccctgtgtgaacacctccaccggaaactag
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