Lates calcarifer (barramundi perch): 108879820
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Entry
108879820 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETD1B-A
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00310
Lysine degradation
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108879820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108879820
Enzymes [BR:
lcf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
108879820
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108879820
HMT complexes
COMPASS/SET1 complex
108879820
COMPASS/SET1 complex (yeast)
108879820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
108879820
NCBI-ProteinID:
XP_050928854
LinkDB
All DBs
Position
LG9:10273312..10293504
Genome browser
AA seq
1833 aa
AA seq
DB search
MSKPGERNRLNEDHGRKQSSSLANGMDSHPVCGSAEKRSHHWRSYKLIIDPALKKGSHKL
YRYDGQTFSMPNPGIPPVDIVRDPRIGRLWTKYKETDLPVPKFKIDECYIGPVPPKEVTF
ARLNDNIREGFLTDMCKKFGEIEEVEILYNPKNKKHLGIAKVVFETVKAAKVAVQSLHNT
SVMGNIIHVELDPKGENRLRYFQLLMNGSYTPRTLPVGGEEAREVSPRSLAEALLGCEPI
RRLSESSVSAVGSTLPPSSSTTPLSLETGYSTGRQDTPQSQGTPHTPRQSSTPFSQDSNY
SSRQSTPAYQSSRPESSGGYKSRRHESKFQDAYNRRPERPQYRSNMYRTTTSEQAPFKQH
QLTPPERHPPPPSFTYTAPPPATPNFKSAFSPYQAPLPPAFPPSEPAFHHPAQREGEYLR
PPQPPLAAATDFLPVKERPETPPIPEPPPEPVAHPTTPPPQTPEHCPSPGSPALDPERNS
LDSRIEMLLKEKRTKLLPFLEERDSDTEVRMEGSPISSSSSQLSPIPPYTSGSQGGQQNS
RPSSTGLEDISPTPLPDSEDEEPILGTASLIKRMSSPVHDKMSNSDLKDGHFRGHTPTDK
MDTGHQSSGEDMEISDDEMPGTPITSGDCSKGIVVNSAVSPMQTIPIPPPGFPPLPHQAG
FPIPHHHLPPHSAVPGHPHLAGHPGVPPHMLPPMGPYPHSMMPLVQMELMNCLRWEQWST
VPMSFQMQQQMLSRIAQTRGPYAYPHFMDSGASGPFVGPYPPLSLGAAPTSGSAGAPGQQ
WQHPSIPKFNPTVPPPGYESKKEDPHKATVDGVLLVIVKELKAIMKRDLNRKMVEVVAFR
AFDDWWDKKERSAKASLTPVKGAEGKEEERPKPKETMGSSLLENWNKGEGLGYEGMGLGI
GLRGAIRLPSFKVKRKDPPEATAVGDNKRARPSTPVDDELEDEDRDRDPAELPSEDSKMD
GDGMAAKRRHSRPLELDSEGEEEVDTSGKEEESLSDRDGEPDETEATDRVSSDKESGDED
GDDEDEGDSSSESTSSDSSDDEAESSASSKASSDSSAESEDSSEYELSSEEEDDDEDEGR
AATEDEGKEAATSSSSSSSSSSSSDEEEGKAEAKPPSPPPRPVLEDKEDKRSKEEPSSKL
KRRPPSPEEELMEDLKPPSPKDIRVKERDIRDGNIPVVKAEPQEHVANLRPPTPTGALPD
SDQEMKAKGKAEPLEVACTPGRLAPPHLDSNTPVPKSVSTSLMHLPLPTHPATEGRSLLH
PPPGPLPDLPQRARLPTDEDIPRTPGRDLMERARSLGKSQSTDTVPITPGSDAPLTGSSL
LLSSPHIPGSPFSYPAQSPVLSAGVPRTPGRDLTFTPVFPDPTALTLNRKVSSESLDDRP
VFKEPPISALPNQALSAGTEHSASVPEDLPAGLTVDVPVPSDTAPSKRKPGRPKTKKIPA
ASAADESLELSSESTPHDVHPADLSMQMMSTKSPSHPILDFREGEAEPQTVLPAEDGYLS
YKEEPAVAVKPARRARRGWEELLLDSLSPVTTPPRPYFNPRSEFEEMTILYDIWNEGIDE
EDIRLLQITYDKMLQQDNGNDWLNDTLWVNHPPTNIPGVKKKRRDDGMRDHMTGCARSEG
YYKIDKKDKIKYLQSTRLQSEEPPVDTQGMSIPAQVHASTRAGSERRSEQRRLLSSFACD
SDLLKFNQLKFRKKKIRFCKSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRY
EEEGIGSSYMFRVDHDTIIDATKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSRQPI
NVNEEITYDYKFPIEDEKIPCLCGAENCRGTLN
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcctggggagagaaacagattgaacgaagaccatggcagaaagcagagttca
agtttggcgaacggcatggacagtcatcccgtctgcggctcggcggagaagcggagtcac
cactggagaagttacaagttgattatcgacccggcgctgaagaagggatcacacaaactg
tatcgctacgatggacagactttcagcatgcccaaccccgggataccaccggtggacatc
gtccgagacccgaggattggccgtctctggactaagtacaaagagacggatcttccggtg
cccaaatttaagatcgatgagtgttacatcggccccgtgcctccaaaggaggtgacattc
gccaggctcaacgacaacatccgagaaggatttcttacggacatgtgcaaaaaattcgga
gaaatcgaggaggtcgagatcctgtacaatccgaagaacaaaaaacatctgggaattgcc
aaagttgtttttgagaccgtgaaagccgccaaggtggccgtgcagtcgcttcacaacacg
tctgttatgggaaacatcatccacgtggagctggacccgaaaggtgagaatcgccttagg
tatttccagctcctgatgaatggcagctacactccgaggacactgcctgttggtggagag
gaggccagagaagtttcccctcgaagcctggcagaagccttactgggctgcgagcccatc
cgccggttgtcagagagcagtgtgtcagctgtgggatcgacattaccgcccagcagctcc
accactcctctgtccctggagacgggatactccaccggaaggcaggacacaccccagtcg
cagggaacccctcataccccacgccagtcaagtacgcccttctctcaagactccaattat
tccagtcggcagtccacgcctgcgtaccagtccagccggcccgagagctccggaggatac
aaatcccggagacatgagagtaagttccaggatgcgtacaaccggagaccagagaggcct
cagtaccggagcaatatgtaccgaactacgacatctgaacaagctcccttcaaacagcac
caactcaccccaccggaacgccaccctccacctccttccttcacctacactgcgcctccc
cctgctacccccaacttcaagtccgctttctcaccctaccaggcccctttgccccccgcg
ttccccccgtcagaaccagctttccatcacccagcccaaagggagggtgagtacctccga
ccgccgcagccgcccctggcggctgctactgactttttgcccgtcaaggagagaccggaa
actcctccaatccccgagccaccgcctgagcccgttgctcatccaaccacccctccaccc
caaacacccgaacactgcccctcacccgggtcccctgcgctggatccagagcgcaatagc
ctggattcccgcattgagatgctcctcaaagagaaaaggacaaaactgctgccattcctg
gaggagcgagactcggacactgaggtgcggatggagggaagtccgatttcctcctcatcc
tctcagctatccccaatccccccgtacacgagcggctctcaaggtgggcagcaaaactcc
cgtccctctagcacaggcttggaggatatcagtccgaccccactgccagactcggaggat
gaggagccaattcttggaactgcctctctgatcaagagaatgagctctcctgtccacgat
aagatgagcaacagtgacctcaaagatggacattttcgaggccacactcccactgataaa
atggacacgggtcatcagtcgtcaggggaagatatggaaatctcagacgacgagatgcct
gggactccaatcaccagcggagactgcagcaagggcatcgttgtcaactctgcagtgtcc
ccaatgcagaccatccccatccctccccccggtttcccccctcttccgcaccaagccggc
ttcccgatcccgcatcaccacctgccccctcactctgccgtcccaggacatcctcacctg
gctggtcatcctggagtgcctccccatatgctgccacccatgggtccctaccctcatagc
atgatgccactggtgcaaatggagctgatgaactgcttgcggtgggaacagtggagcacg
gttcccatgtcgttccagatgcagcagcagatgttgagtcgcatagctcagactagaggg
ccctatgcttatccacattttatggacagtggtgcatcggggccgtttgtcgggccttac
ccgcctctgtctctaggtgctgcgcccacgagcggcagcgcaggggcacctggacagcaa
tggcagcatcccagcataccaaagttcaaccctactgttcctcctcctgggtatgagagc
aaaaaggaagatccgcacaaggccactgttgacggtgtgctgctggtcattgtcaaagag
ctgaaggccatcatgaagagggacctcaaccgtaaaatggtggaggtggtggcttttaga
gcttttgacgactggtgggataagaaggaacgctcagccaaagcatctttgactccagtg
aagggcgcggaggggaaagaggaagaaagacccaaacccaaagagacaatgggttcgagt
ctcctggagaactggaacaagggtgagggactgggctatgagggaatgggcctgggaatt
ggtttgcgaggagccatccgcctgccctccttcaaggtgaaaaggaaggacccacctgag
gccacagcagtaggcgacaacaaacgagcccgaccctccactccagtggacgacgagctt
gaggatgaagaccgggatcgagacccagctgagctcccctcggaagattccaaaatggac
ggcgacggcatggctgcaaagagacgacactcgcggccgcttgaactggacagtgaggga
gaggaggaggtggacacctcagggaaggaggaggagtctttgtctgacagggatggggaa
cctgatgaaacggaggctacagacagggtgtcgtcggacaaagagagtggtgatgaggat
ggtgatgatgaagacgagggagactcatccagcgagagcacttcctcagactcatctgat
gatgaagccgagagttcagcttcctccaaggctagctcagactcttcggcagaaagcgaa
gactcctcagagtacgagttaagctcggaagaggaggacgatgacgaggacgaaggcagg
gcagcgacagaggatgaaggcaaagaggcagccacgtcctcgtcctcttcatcctcatcc
tcttcgtcttctgatgaggaggaggggaaggcggaggcaaagcctccgagccctcctcca
agaccggtcctagaggataaggaagacaagaggagcaaggaggagccaagcagcaagctc
aaacgcagacctccgagtcctgaggaggagttaatggaggacctgaagccaccatcacct
aaagacatccgagtcaaagagcgagacatcagagatggcaacattcctgtagtgaaggct
gaacctcaggagcatgtagcgaacctgcggccacccactcccacaggcgccctgcccgac
agtgaccaggagatgaaagccaaaggtaaagcagagcccctggaagtagcctgcacccca
ggtcgattagccccaccccacttagattcaaacacgcctgtccccaaatccgtctccaca
tccttaatgcacctcccgctccctactcacccagcgacagaaggtcgctccctccttcat
ccaccacctggtcccctacctgacctcccacagcgggccaggctccccacagatgaggat
atcccccgcacaccgggcagggacctgatggagcgtgcccggagtctgggcaagtcccag
agcacggacacggtgcccatcacgcccggcagtgatgccccactcacaggcagcagcctg
ttgcttagctcccctcacatccctggtagccccttctcctaccctgctcagtcccctgtc
cttagtgccggagttccccgcactccaggaagagacttaaccttcacccctgtcttccct
gaccccacagcactaactcttaatagaaaggtatcctctgagagcctggatgatagacca
gtttttaaagagccgcccattagtgcactgcctaaccaagccctgtcagctggcacagag
cactcagccagtgtccctgaagatctgcctgctggtctcactgtagacgtccctgtgcca
tcagacactgccccatcaaagaggaaacctggacgacccaaaaccaaaaagatcccagct
gcctccgcggccgatgagtctttggagctgtcatcggagtccacccctcacgatgtgcat
cccgcagatctctccatgcaaatgatgtccaccaagtctcccagccacccgatcctggac
ttccgggaaggagaggcggagcctcagacagtcctccctgctgaagacggttacctgtcc
tacaaagaggagccggccgtggccgtgaagcctgctcggagggcgcggcgaggctgggag
gagctgctgctggacagcctgtcccctgtcaccacacctccccggccgtacttcaaccca
cggtctgagtttgaggagatgaccatcctgtacgacatctggaacgagggcatagatgag
gaggacattcggctcctgcagatcacgtatgacaagatgctccagcaggataacggcaat
gactggctcaatgacacactgtgggtcaaccatcctcctaccaacatccctggagtgaag
aaaaagaggagagacgacggcatgagggatcacatgaccggctgtgcccgaagcgaggga
tactacaagatcgacaagaaggacaagatcaaataccttcagagcacacggctgcagtcg
gaggagccgccagtcgacacacagggtatgagtattcctgcacaggtccacgcttctacc
agagctgggtcagagcggcggtcggagcaacgacgtttgctgtcctcattcgcgtgtgac
agtgacctgctgaagttcaaccagctgaagttccgaaagaagaagatcaggttctgcaag
tcgcacatccacgactggggtctgtttgccatggagcccattgctgctgatgaaatggtc
atcgagtacgtgggacagaacatcagacaggtgattgcagacatgcgggagaagcgctac
gaggaggagggcattggtagcagctacatgttccgcgttgaccacgacaccatcatagat
gctacgaagtgcggcaactttgcccgtttcatcaaccacagctgcaatcctaactgttat
gcaaaggtcatcacagtggagtctcaaaagaagattgtgatctactccaggcagcccatc
aatgtcaatgaggagatcacatatgactacaagttccccatcgaggacgagaagatcccc
tgtttgtgtggggcagagaactgcagaggaacgctgaattaa
DBGET
integrated database retrieval system
