Lates calcarifer (barramundi perch): 108882891
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Entry
108882891 CDS
T04895
Name
(RefSeq) UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X1
KO
K09667
protein O-GlcNAc transferase [EC:
2.4.1.255
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00514
Other types of O-glycan biosynthesis
lcf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
108882891
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108882891
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108882891
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108882891
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.255 protein O-GlcNAc transferase
108882891
Glycosyltransferases [BR:
lcf01003
]
O-Glycan biosynthesis
O-linked GlcNAc type
108882891
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
108882891
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
108882891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_41
TPR_1
TPR_11
TPR_17
TPR_2
TPR_8
TPR_12
TPR_19
TPR_16
TPR_14
TPR_7
TPR_10
TPR_6
TPR_9
TPR-S
NatA_aux_su
TPR_15
FAT
TPR_MalT
Wzy_C_2
SHPRH_helical-1st
TPR_21
MIT
SNAP
EST1_DNA_bind
ANAPC3
IcmF_helical
BTAD
TPR_20
Alkyl_sulf_dimr
TPR_5
Tcf25
DUF627
Motif
Other DBs
NCBI-GeneID:
108882891
NCBI-ProteinID:
XP_018531178
LinkDB
All DBs
Position
LG8:complement(8784122..8798036)
Genome browser
AA seq
1068 aa
AA seq
DB search
MASSVGNVADSTEPTKRMLSFQGLAELAHREYQSGDFEAAERHCMQLWRQEPDNTGVLLL
LSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKP
DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACY
LKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARI
FDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLA
NALKEKGNKCHFLFQVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKA
LEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG
ALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCL
QIVCDWTDYDERMKKLVSIVADQLDKNRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCLD
KVHALIKINALHKPAYEHPKDLKASGGRLRVGYVSSDFGNHPTSHLMQSIPGMHNPEKFE
VFCYALSPDDSTNFRVKVVAEAHHFTDLSQIPCNGKAADRIHQDGIHILVNMNGYTKGAR
NELFALRPAPIQAMWLGYPGTSGAPFMDYIITDKETSPMEVAEQYSEKLAYMPNTFFIGD
HANMFPHLKKKAVIDFKSNGHIFDNRIVLNGIDLKAFLDSLPDVKVIKMKCDNNQEAAGD
TNGALSMPVIPMNTAAEAIINMINQGQIQVTINGFTVSNGLATTQINNKAATGEEVPRTI
VVTTRSQYGLPEDSIVYCNFNQLYKIDPPTLQMWANILKRVPNSVLWLLRFPAVGEPNIQ
QYAQNMGLPGSRIIFSPVAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMP
GEHTRLLGETLASRVAASQLNCLGCPELIAQSRQDYEDIAVKLGSDMEYLKMVRARVWKQ
RICSPLFNTKQYTMDLERLYLQMWEHHSNGNKPEHLVKFQTVETSENA
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctcagtgggaaacgtggctgacagcacagaaccgacaaaacgtatgctttcc
ttccaagggttggctgagctggcgcaccgggagtatcagtcaggggactttgaggcagct
gagcgccactgcatgcagttgtggaggcaggagcctgataacacaggcgtgctgctgctc
ctgtcctccatccacttccagtgccgaagactcgacaggtctgctcatttcagcaccttg
gccatcaaacagaacccaatgttggctgaggcctactccaacctggggaatgtgtacaag
gagcgtgggcaactgcaagaggccatagagcattatcgccatgctctgagactgaagcca
gattttattgacggatacatcaacttggcagcagctctggtggctgcgggggacatggag
ggagcagtgcaggcttatgtgtctgcgttacagtataaccctgatctttattgcgtgcgt
agtgacctgggaaacttgcttaaagctcttggacgtttggaagaggccaaggcttgttac
ctgaaagccattgagactcagcccaactttgcagtggcttggagcaacctgggctgtgtg
ttcaacgcccagggagagatatggctggccatacaccattttgaaaaggcagtgactctg
gacccaaatttccttgacgcttacatcaatttagggaacgtattgaaggaagcccgaatc
tttgacagggctgtggctggatacctgagagccctgagtcttagccccaaccatgcagtt
gtccatggaaacctggcctgtgtctactatgagcaaggtctcattgacctggctattgac
acttaccgtcgtgctattgaattgcagccacacttcccagacgcctactgcaatttggca
aatgccctgaaggagaaaggcaataaatgccatttccttttccaggtatctgaagcagaa
gagtgctacaacaccgccttgcgtttgtgtccaacccatgctgactcccttaacaacttg
gccaatatcaagcgtgagcagggaaacatcgaggaggcagttcaactctataggaaagcc
ctagaggtgttccccgagtttgcagcagctcactcaaacctggccagtgtcctgcagcag
cagggaaaactccaggaggccctcatgcactacaaggaggccatcagaatcagccccaca
tttgctgatgcctactctaacatgggtaatacattgaaggaaatgcaagatgtacaagga
gcacttcagtgctacacccgtgccatccagattaatcctgcctttgctgatgctcacagc
aatttggcctctatccacaaggattctggaaacatcccagaggcaattgcatcttaccgc
acagccttgaaacttaagccagacttccccgatgcttactgcaacttggcgcattgcctg
cagattgtgtgtgactggacagattatgacgagcggatgaagaagcttgtgagcattgtg
gctgaccagctggataagaaccgcttgccttcagtgcaccctcaccacagcatgctgtac
ccgctctctcacggctttcgcaaggccattgccgagcgccacggaaacctttgcctggac
aaggtacacgcactgatcaaaatcaatgctctgcacaaacctgcttatgagcatccaaag
gatctgaaggccagtggtggacgtctgcgtgttggctatgtcagctcggactttggcaac
cacccgacttcgcacctgatgcagtccattcctggaatgcacaatcctgagaaatttgag
gtgttctgctacgcactcagccctgatgatagtaccaacttccgtgtgaaagtagtagcc
gaggctcatcacttcacagacctgtcacagatcccttgcaatggcaaagcagctgatcgc
attcaccaggatggaatccacattctggtcaacatgaacggatacaccaaaggagcccga
aatgaactgtttgccctccgccctgccccaattcaggctatgtggctgggttacccagga
accagtggcgctcccttcatggactacatcatcactgacaaggagacgtcacctatggag
gtagctgagcagtattctgagaaactcgcctacatgcccaacactttcttcattggagac
cacgctaatatgttccctcacctcaagaaaaaggcagtgattgacttcaagtccaatgga
cacatctttgacaaccgcattgttcttaatggtattgatctaaaggccttcttggacagt
ctgccagatgtcaaagtgataaagatgaagtgtgacaacaaccaggaagctgctggggac
acaaacggagctctgtccatgcctgtgattcccatgaacacagcagctgaagcaatcatc
aacatgatcaatcaaggccaaatccaggtcacaatcaacggcttcactgttagcaatggc
ctggccaccacacagattaataacaaagctgcaactggggaagaggtgccacgcacaatc
gtcgtgacaactcgctcccagtatggtcttccagaggactctatcgtctactgcaacttc
aaccagctctacaagatcgatcctcccactcttcaaatgtgggccaacatcctgaagcgt
gtgcccaacagtgtgctgtggcttcttcgcttccccgctgtgggtgagcccaacatccag
cagtacgctcagaacatgggtctgcctggttctcgcatcatcttctctcccgtggcgccc
aaggaggagcatgtgagaaggggccagctggctgatgtgtgcttagacactcctctgtgc
aatggtcacaccacaggcatggatgttctctgggctggaacacctatggtaaccatgcca
ggtgagcacactaggcttttaggtgagacccttgcctcccgtgtggctgcctcacaactc
aactgtctcggctgccctgagctaatagcccagagtcgtcaggactatgaggacatagca
gtcaaactgggctctgacatggagtacctgaagatggtcagagcacgtgtgtggaagcag
cgaatctgcagccctctgttcaacaccaagcagtacacaatggacctggagaggctctac
ctgcagatgtgggagcaccatagcaatggcaacaagccagaacacctggtcaaattccaa
acagtcgagaccagtgagaatgcctga
DBGET
integrated database retrieval system
