Lates calcarifer (barramundi perch): 108883071
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Entry
108883071 CDS
T04895
Symbol
pparab
Name
(RefSeq) peroxisome proliferator-activated receptor alpha b
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03320
PPAR signaling pathway
lcf04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108883071 (pparab)
03320 PPAR signaling pathway
108883071 (pparab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108883071 (pparab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lcf03310
]
108883071 (pparab)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108883071 (pparab)
Nuclear receptors [BR:
lcf03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
108883071 (pparab)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108883071
NCBI-ProteinID:
XP_018531458
UniProt:
A0A4W6CW80
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Position
LG10:6998541..7026649
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AA seq
469 aa
AA seq
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MVDMESHYHPPSPLEDSVLDSPLCADDDFMGGMEELQDISQSIDNDALSSFDVPEYLSSS
NGSEGSTVLDALTPASSPSSVVYGVAAGQEELSSSSSSLNLECRVCADRASGYHYGVHAC
EGCKGFFRRTIRLKLEYDKCERRCKIQKKNRNKCQYCRFQKCLSVGMSHNAIRFGRMPQS
EKLKLKAEMVTGDRVVEDPQLADQKTLARQIYEAYLKNFNMNKAKARTILTGKTSTPPFV
IHDMETLQLAEQTLVAKMVGSAGVLKDREAEVRIFHCCQCTSVETVTELTEFAKSVPGFS
SLDLNDQVTLLKYGVYEALFAMLASSMNKDGLLVAYGSGFITREFLKSLRRPFSDMMEPK
FQFAMKFNALELDDSDLALFVAAIICCGDRPGLVNVAHIERMQESIVQVLQLHLLANHPD
DTFLFPKLLQKLADLRQLVTEHAQLVQEIKKTEDTSLHPLLQEIYRDMY
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacatggagagccactaccatcccccttcccccctggaggactcggtgctggac
agccccctgtgcgccgatgacgacttcatgggcggcatggaggagctccaggacatctcc
cagtctatcgacaacgatgccctcagctcttttgatgtccctgaatacctgtcctccagc
aatggctcagaaggctccactgtcttagatgccctgacgccagcatccagtccctcgtca
gttgtttacggggtggcagcaggccaggaggagctctcatcttcctcctcatcgctcaat
ctggagtgtcgagtgtgtgctgaccgtgcctcaggctaccactacggagtccacgcctgc
gagggttgcaagggtttttttcgacggaccatccgtctgaagctggagtatgacaagtgt
gagcgccgctgcaagatccaaaagaagaaccgcaacaagtgccaatactgtcgcttccag
aagtgcctgtcagtgggcatgtcccacaatgccatccgttttggtcggatgccccaatcg
gagaagttaaagctgaaggcggagatggtaacaggggacagggtggtggaggaccctcag
ctagccgaccagaagacactggccaggcagatttacgaggcctacctcaagaacttcaac
atgaacaaggccaaggctcgaaccattctcaccggcaagaccagcacccctcctttcgtc
atccatgacatggagaccctccagctggctgaacagacactggtggccaagatggttggc
tctgcgggagtgttgaaagacagggaagcagaggttcggattttccactgctgccaatgc
acgtcggtggaaaccgtcacagagctcacagagtttgcaaagtccgtccccgggttctca
agcctggacctcaacgatcaggtgactcttttgaaatatggagtgtacgaggctcttttc
gccatgctcgcctccagtatgaacaaagacgggcttctcgtagcctacggttcaggcttc
atcacccgggaattcctcaagagcctgcgtcgtccgttcagcgatatgatggagccaaag
ttccagtttgccatgaagtttaacgcactggagctggacgacagtgacctggctctgttt
gtggccgctatcatctgctgtggagaccgaccaggcctggtcaatgtggcacacatagag
agaatgcaggagagcattgtgcaggtgctacagctccatctgctggccaatcacccagac
gacactttcctcttccccaagctgctgcagaaactggctgacctccggcagctagtcacc
gagcatgcacagctggtgcaggagatcaaaaagacagaggacacctcactgcacccactc
ctgcaggagatctacagagacatgtactga
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