Lates calcarifer (barramundi perch): 108883189
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Entry
108883189 CDS
T04895
Symbol
ptpn23a
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 23 isoform X1
KO
K18040
tyrosine-protein phosphatase non-receptor type 23 [EC:
3.1.3.48
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108883189 (ptpn23a)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108883189 (ptpn23a)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
108883189 (ptpn23a)
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Non-receptor PTPs
108883189 (ptpn23a)
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
108883189 (ptpn23a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
Y_phosphatase
ALIX_LYPXL_bnd
Y_phosphatase3
DSPc
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
108883189
NCBI-ProteinID:
XP_018531625
UniProt:
A0A4W6CIC4
LinkDB
All DBs
Position
LG15:3212295..3228027
Genome browser
AA seq
1929 aa
AA seq
DB search
MEAVPRMPMIWLDLKEAGEFQFSPSVRQFILKNYGENPDNYNEQLKKLETLRQSAVNVTR
DFEGCSTLRKYFGQLHYLQSRVPMGASQEAAVPISWTEIFSGKTVTHDDISYEQACILYN
LGALHSMLGAMDNRVSEEGMKVSCTHFQCSAGAFSYLRDHFSHNFSVDMSHQILNLNINL
MLGQAQECLLEKSMLDNRKSFLVARISAQVVDYYKEACRALENSETASMLGKIQKDWKKL
VQMKIYYFAAIAHLHMGKQAEEQQKYGERLAYLQSSLDKLSEAIKLAKGQPDSVQEALRF
TMDVIGGKFNSAKKDNDFIYHETVPSLETLASVKGAPLVKALPVNPTDPSVTGPDLFAKL
VPMAAHEASSLYSEEKAKLLRDVMAKIESKNETLEQFMDSLGLEPESVDNLDMYSHIPPV
LMEKCAALSVRPDTVKSLIQSMQVLSGVFTDVESSLKEIRDVLESDEAGERALQEVGGPA
AGEVHPAAQAQALAEIRRDLEKYMEAHEKASFTNTELHRAMNLHISNLRLLGGPLDSLRE
ALPRPQLSEEEVAGLQCMKRILGKVQEMREQRSSLEKQLRDLIQQDDITSTLVTTERADM
KHIFEEQLKKYEQVKVYIDQNLAAQENILKALTEANVQYASIRKGLSQTEQQWNSTVQGL
VGSYEAYEDLMKKSQEGKEFYDDLEAKASRLLERAKALCQTRADERKPVLEKETQKKPPA
RPTAAKPSLKPKAPDADSACSSLEDPELAQLSAAILALGGDLPEELRSLPPDIPSLATTR
LPGPESFIPPGANLGGSSSLPWPGAPAAGLPRFPANLPPPELLARIAQFPTSGALATQGP
LPRGPLPQMPPQMPAQAIVPGYRPPPPQGPQPGPVAPTPVRPSTTTVDSIQAPIPSYAPT
PHHPIPPAASAGYTVPPQMGAYPQFMPQPGMPIRGPGQTVAPQPKQQKHPQQYPQPLPQG
YQPGPRAIPGPHPPLQTQQAYPHGYMPPQPGVPPQYQQAFPGQLQPHQQNGFQPPPQIPQ
GYQTPQGFVPQQHPQMIPRPPQAQMPPQTAHPQIPPTSQPAPPVSQPYIPHPNQQMPPGL
PHQHMLPQQQQIPMPPSAQKIQPHPQMQIPGGPRAQMPPTSQPMPPVSQTYMPPTSQPIH
PTLHPQVPPASQPHMVPGPQVHLPRGPMPQMPPGALPQQHHPHPGQPPMPNMPQQPMRMP
SQPQTQPPHSGGVCYPGGAPMMQPLAPQPAAPQQPQAPLPMTHPQPSTMYPSAPGPNVPP
SAPQQPTAMGPHGPHVPPAQHMIQPSPGGPSAAQPPNTVPPSPSPSPSPSPSPGPTSLGL
NPQQRPTPAPTPGGTAPPTLPSPSAVSPSTSLFQRQNSSTDDLLSSSPESQPGGTKAPTN
VLQPTKADPQDGERRKKSSQGVLLIQGDPYQAPERVARLHSELERYRAQVDSLEHPSETE
GGLSVLDARWKELQDQQEKDARQLSIAIARCYTMKNRHQDVMPYDLNRVVLQSGKDDYIN
ASYVEDLSPYCPRLIATQAPLTGTAADFWLMVYEQKVSLIVMLVSEQELEKGKVLRYFPT
ERGQQLSQGPITLSLTTQKTTPTHVERMISLQYRDQSLKRTVVHLQFTSWPELGLPDSKS
NLLRFIQEVHGHYLHQRPLHTPVVVHCSSGVGRTGAFCLLYAALQELEAGNGIPDLPLLV
KKMRQQRKNMLQEKLHLKFCYEAVLKHAEHVLQRHGITTATCSKNTSSAATKPYLRQESQ
QDIVLGGDMPISSIQATIAKLSIRPPSATDPAMEALSGLEEQVGTILSDLDSLGDIQQFQ
NPCPPTDAQPPSSFSPPLSSPAHSPPPPNGLDAISPSPPAANHQPVPEAAPSVSPPPASS
AAPAPSSLELLASLTPEAFSMEGGGRGKQRVTKQSFLQPAEGQGLHGTRGEEGDDPLSSL
DPLWSLNKR
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtcccccggatgccgatgatctggctggatctaaaagaggcaggagagttc
cagttcagcccgtccgtcaggcagttcatcttgaagaactatggagagaatccggacaac
tacaacgaacagctgaagaaactggagacactgcggcagagcgcagtgaacgtgacgagg
gatttcgagggatgcagcacactgaggaagtacttcggccagctgcattacctccagagc
cgagtgcccatgggagcgagccaggaggctgctgtacccatctcatggactgaaattttc
tctggaaaaacagtcacccatgatgacatcagctatgagcaagcctgcatcctctacaat
cttggggccctgcactccatgttgggagccatggataacagggtgtctgaggaggggatg
aaggtgtcgtgtacccacttccagtgctctgctggggctttctcctacctgagagaccat
ttcagccacaacttcagtgtggacatgagccaccagatcctcaacctcaacatcaacctc
atgctgggccaggctcaggagtgtcttctggagaagtccatgttggacaacaggaagagt
ttcctggttgcccgcatcagtgctcaggtggtggattactataaagaggcctgcagggct
ctggagaactcggagacggcctccatgctggggaagatccagaaggactggaagaaactg
gttcagatgaagatctactactttgctgctattgcacatcttcatatgggaaagcaggca
gaggagcagcagaaatatggagaacggttggcgtacctgcagagctccttggacaaactc
agtgaagccatcaagctggccaagggtcaacctgacagcgtgcaagaggccttgagattc
accatggatgttatcggtggaaagtttaattcagccaaaaaggacaatgacttcatctat
catgagacggttccttctctggagactctggcctcagtcaaaggtgcaccacttgtaaaa
gctctgccagtgaaccccactgaccccagcgtcactggaccagacctatttgccaagctt
gtgccaatggctgcccatgaagcctcctctctgtacagtgaggagaaggcgaagctgctg
agggacgtcatggccaagatagaaagcaagaatgaaacactagagcagttcatggactct
ctgggtttggagccagagtcggtggacaacctggacatgtacagtcacatccctcccgtc
ctgatggaaaaatgtgctgcactcagcgtccgacccgacaccgtcaagagcctcattcag
tccatgcaggtgctctcaggtgtgttcactgatgtggagtcttcactgaaggagatcagg
gacgtcctggagtcagatgaggctggtgagcgagccctccaggaggttggcggccctgct
gcaggcgaggtgcacccggcagcgcaggcccaggctctggctgagatccgcagggacttg
gagaagtacatggaggcccacgagaaggccagtttcaccaacacggagctccaccgggcc
atgaacctacacatcagcaacctgcgtctgctgggggggccactggacagtctgagagag
gccctgccccggccccagctcagtgaagaggaggtagcagggctgcagtgtatgaagcgg
atcctggggaaggtgcaggaaatgagggaacagagaagctctctggagaaacagctccgt
gacctaatccagcaggatgacatcacctccaccctcgtcaccacagaaagggctgacatg
aagcatatatttgaggagcagctaaagaagtacgaacaggtgaaggtgtacattgaccag
aacttggctgctcaggagaacatcctgaaggccctgacagaggctaacgtccagtacgcc
tcaatccgcaagggcctgagccagactgagcagcagtggaacagcactgtgcagggactg
gtgggctcgtacgaagcctatgaggacctgatgaagaagtcacaggaagggaaggagttc
tacgatgacctagaggccaaagcgtcccgactgctggagagagcgaaggccctgtgtcag
acgagagcagacgagaggaagcctgtcttggaaaaagagacccagaaaaagccccctgca
cggcctacagcagctaaaccctctctgaagccaaaggctccagatgctgactctgcctgc
tccagcctggaggacccagagttggcccagctcagtgcagccattttggccttggggggt
gacctacctgaggagctccgcagccttccccctgacattccttcccttgccaccactcgt
ctgcctggtcctgaatctttcatcccacctggtgctaacctgggcggcagcagctctctg
ccttggcctggtgctccagctgctggtctccctcgcttccctgccaatctgccacctcca
gaactcttggcacggatagctcagtttccaacttcaggcgctctagctacacagggaccc
ctgccacgcgggccccttcctcagatgcctccacaaatgccagcccaggcaatagtgcca
ggttatcggccacccccccctcaaggtccccaacctggccctgttgcccctacaccagtc
cggccctcaaccactactgtggacagcatccaggcccctatcccaagctacgcccctaca
ccacaccaccctatcccacctgcagcctcggctggctacactgtacccccacagatgggg
gcctatccccagtttatgccccaaccagggatgcccattcgagggccaggccaaactgtt
gcaccccaaccaaagcagcagaaacatccacagcaatacccccagccactgcctcagggg
taccagcctggaccaagagctattcctggaccacaccctcctctccagacccagcaagcc
tacccacatggatatatgcccccgcagcctggtgttcctccccagtaccaacaggcattc
ccaggtcagctgcagccacatcaacaaaatggttttcaacccccacctcagatcccccaa
ggctatcagactccacagggctttgtaccccagcagcaccctcaaatgataccaaggcca
ccccaggcccagatgccacctcaaactgcacacccacaaatacccccaacttctcagcca
gcaccccctgtatctcagccctacataccccatccaaaccaacagatgccccctggactc
cctcaccaacacatgttgccacaacagcaacaaataccaatgccccctagtgcccagaag
attcagccccacccacagatgcagataccaggtggtcccagagcacagatgccccccaca
agtcagccaatgccgccagtctcacagacctacatgcccccaactagccagcctattcac
ccaaccctgcacccacaggtgcctcctgcttctcaacctcatatggtccctggtcctcag
gtccacctgccaaggggccctatgccccaaatgccccctggtgcactaccccaacagcat
cacccccaccctggacagcctcctatgccaaacatgccccagcagcccatgcggatgccc
agtcaaccccagactcagccccctcattctgggggagtgtgctacccaggaggggctcca
atgatgcagcctctggcaccacagccggcagctccccaacaacctcaggctcctcttccc
atgacccatccacagccatctactatgtacccttcagctccaggacctaatgtacctcca
agtgccccacagcagcccactgccatgggcccacatggtccacatgttccccctgctcag
cacatgatccagccctctcctggaggtccttcagcagctcagccacccaacactgtccct
ccctccccttccccttcgccctctccatctccctctccaggccctacctctctgggtctg
aacccccagcagagacccacaccagcccccacccctggaggcaccgccccacccactctt
ccctctccctctgctgtctctccctccacatcgctgtttcaacggcagaactcaagtaca
gatgacctcctctcctcaagcccagagagccaacctggaggcaccaaggcccccaccaat
gtcctccaacccactaaagctgacccacaggatggggagcgtcgaaagaagagctcccag
ggagttctcctgattcagggtgacccatatcaagctccagaacgtgtcgcccggcttcac
agtgaactggaacgatatagagctcaagtagattccctggagcacccctcagagactgag
ggtggcctatcagtgctggatgcccgctggaaagagcttcaggaccagcaggagaaggac
gctcgccagctctccatcgccatcgcccgctgctacaccatgaagaaccgtcaccaggat
gtcatgccctacgacctcaaccgtgtggtgctgcagtcaggcaaagatgactacatcaac
gccagctatgtggaggacttgtcaccgtactgcccacgccttattgccacacaggcgcca
ctcaccggcacagcagcagatttctggctgatggtgtacgagcagaaggtgtcactgata
gtcatgctggtttcagagcaggagctggaaaagggaaaagttctgcgctacttcccaaca
gagcgtggccagcagctctctcagggaccaatcacactcagtctaaccacgcagaagacc
acaccgacgcacgtggagcgcatgatcagtctgcagtaccgtgaccaaagcctgaagcgc
actgttgtccatctccagttcacctcctggccggagctgggtcttcctgacagcaagagc
aacctgctgcgattcatccaggaggttcatggacactacctccaccagaggcccttacac
acacctgttgtggtgcactgcagttcgggcgttggacgcaccggcgccttctgtctgctg
tacgcggctctgcaggagctggaggcaggaaacgggatcccagacctcccactgctggtg
aagaagatgagacagcagaggaagaacatgctgcaggagaagctccatctgaaattctgc
tatgaggctgtgttgaagcatgctgagcacgtccttcagcgccacggcatcactactgcc
acctgcagcaagaacaccagctctgcagccaccaagccttacttgagacaggagtcgcag
caggatatcgtcctcggcggtgacatgcccatcagctccatccaagccaccatcgccaag
ctcagcatccggccgcccagcgccacagacccggccatggaggccctgagtggcctggag
gagcaggttgggaccatcttgtctgacctcgactccctgggtgacatccagcagttccag
aacccctgtccacctacagatgcccagcccccttcctctttcagtccgcctctctcctcc
cctgcccactctcctcctccacccaacggccttgatgccatctccccgtcccctccagca
gccaaccaccagccagtcccagaggctgctcccagcgtcagcccgcctcctgcttcctcc
gctgctccggctccttcttctctggagctgctggcctcgctgacgcccgaggccttctcc
atggagggaggaggccgggggaagcagcgggtgaccaagcagagcttcctgcagccagcg
gagggtcagggtctccatgggactcgaggggaagaaggtgacgacccgctcagcagcctg
gaccccctctggagcctcaacaagcgctga
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integrated database retrieval system
