Lates calcarifer (barramundi perch): 108883924
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Entry
108883924 CDS
T04895
Symbol
casq1a
Name
(RefSeq) calsequestrin-1a isoform X1
KO
K23468
calsequestrin 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108883924 (casq1a)
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Motif
Pfam:
Calsequestrin
Thioredoxin_6
GshA
Motif
Other DBs
NCBI-GeneID:
108883924
NCBI-ProteinID:
XP_018533020
UniProt:
A0A4W6CL41
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Position
LG4:19670284..19680256
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AA seq
466 aa
AA seq
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MKWTWVFVAVLLSFGGLSLGKESLDFPEYDGKDRVHDLNAKNYKSVMKKYDVMVVYYHDH
PGSSRVAQKQFEIEELALELVAQVLDEFDDEDIGVGLIDAKHDKAVAKKLGLDESDSIFI
FTEDEVIEYDGELAADTIVEFIYDVLEDPVEIIDNSKELKGFENIEEDIKLVGYFKSHKS
EHFEAFADAAEEFHPHIKFFATFNPKVAKALELKLNEVDFYEPFMDDPVVIPGKPYSEDE
LVKFIEDNDRPTLRKLQPHNMYEIWDDDVDGEHIIAFAEEADPDGFEFLEILKQVAEDNT
DNPDLSIVWIDPDDFPLLLPHWEKTFGIDLSSPQIGVVDADDADSVWMDMDDGEDLPSVD
ELEDWIEDALSGEIDPDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDY
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggacctgggtgtttgtggcagttttgctgtcctttggagggctatcattgggc
aaggagagcttggacttcccagagtatgatggcaaggaccgcgtccacgacctcaacgcc
aagaactataagtctgtgatgaagaagtacgatgtcatggtggtgtactaccatgaccat
cccggatccagccgcgtcgcccagaaacagtttgagattgaggagttggcccttgagctt
gtagcccaggtcctggatgagtttgatgatgaggatatcggagttggtctcattgatgca
aagcacgacaaggcggttgcaaagaaattaggccttgatgagtccgacagcatcttcatc
ttcacagaggatgaggtcatagagtatgatggcgagcttgcagcagacactattgtggag
ttcatctatgatgttcttgaagacccagtggaaattattgacaatagtaaagaactgaaa
ggcttcgaaaacattgaggaggacatcaaattggtgggctactttaagagtcacaagtca
gaacattttgaagcttttgctgatgctgcagaagagttccaccctcatatcaagttcttt
gccacattcaatcccaaggtcgccaaggcgctggagctgaagcttaatgaggtcgacttc
tatgaacccttcatggatgatccagtggtcatccctggaaagccttactctgaggatgag
ctggtgaaattcattgaagataatgacagaccaaccctgaggaagctgcaaccacacaac
atgtatgagatctgggatgacgatgttgatggtgaacatatcattgcttttgcagaggag
gctgacccagatggttttgagttcctggagatcctgaagcaagttgctgaggataacaca
gacaaccctgacctcagcattgtctggattgaccctgatgacttccccctgcttctgcca
cactgggagaagacttttggcattgatctgtcctctccacagattggtgttgttgatgct
gatgatgctgacagtgtgtggatggacatggacgatggtgaggacttgccttctgtagac
gagctggaagactggattgaggatgctctgtcaggcgaaattgatcctgatgatgatgat
gatgatgatgatgatgatgatgacgacgatgacgacgacgatgatgatgatgacgatgac
gacgacgatgatgatgatgacgatgatgatgatgatgatgacgacgatgatgacgacgac
gacgatgatgacgacgacgacgacgacgacgatgatgatgatgatgacgacgacgacgat
gacgatgacgacgatgacgacgatgatgatgatgacgatgatgatgatgatgacgatgac
gacgatgacgatgattattaa
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