Lates calcarifer (barramundi perch): 108884173
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Entry
108884173 CDS
T04895
Symbol
nr4a1
Name
(RefSeq) nuclear receptor subfamily 4 group A member 1
KO
K04465
nuclear receptor subfamily 4 group A member 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108884173 (nr4a1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108884173 (nr4a1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lcf03310
]
108884173 (nr4a1)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
108884173 (nr4a1)
Nuclear receptors [BR:
lcf03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
108884173 (nr4a1)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
108884173
NCBI-ProteinID:
XP_018533426
UniProt:
A0A4W6FB16
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Position
LG6:complement(22141270..22146778)
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AA seq
571 aa
AA seq
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MTCIHPQHGSQPYENSLGSSDLQSTDFISRLAVDMSSPRDQLSAPSLPSINSLVGTQAGD
FDAYSCQFTAAPAHVAPSSGLETPVKLDDLQVFGCYPGAFTLNYPDEAMSPGGSDYFGSP
ASAPSPSTPGFQSQHASTWDSAFGLYSSSPGYWASEETSVPHAPSFFTFGSVEDMSHLGQ
QHLRDQDPFTLTHPHQSALTFPALSMEQARNFDGNDQMDGSLSPKLKSPSGNDGCCAVCG
DNASCQHYGVRTCEGCKGFFKRTVQKNSKYVCLANKDCTVDKRRRNRCQFCRFQKCLAVG
MVREVVRTDSLKGRRGRLPSKPKVVPEMTTTVSPVSMIASLVRAHIDSNPGIGKLDYSKY
SETDISPNQKEDASDIKQFYDLLTASLEVIRMWAKSIPGFSEFCSEDQELLLESAFVELF
ILRLAYRSNPETEKLIFCNGAVLHKTQCVRGFGDWIDSILEFSQSLHRMKLDVSSFSCLT
ALVIITDRHGLKEPKRVEDLQNQLITCLKDHVSGCGSDSLRPNYLSRLLGKLPELRTLCT
QGLQRIFYLKLEDLVPPPPIVDKIFMDTLPF
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgacttgcatacacccccagcatggatctcagccctatgagaacagccttggcagctca
gatcttcaaagcacagactttatctccaggttggctgtggatatgagcagcccacgggac
cagctctctgctccatccctgccaagcatcaactctctggttggcactcaggcgggtgac
tttgacgcctattcgtgccagttcactgcagcccctgcccacgttgctccgtcatcaggc
ctggaaacccctgtcaagcttgatgacctccaggttttcggctgctaccctggagcgttc
acgctgaattacccagacgaggccatgtcccccggtgggtcagattattttggcagccct
gcgtcagcgccgtctccttcgactcccgggttccagagtcagcacgcgtccacctgggat
tcagcctttggtctgtattcatccagcccaggatactgggcatctgaggagacgtcagtg
ccacatgcaccctctttcttcacatttggttctgtggaggatatgtctcacctgggtcaa
caacacttacgagaccaggaccctttcacattgacccatcctcaccaatctgcactgacc
ttcccggccttgtccatggagcaagcacgtaactttgatggcaatgatcagatggatgga
agcttatcacccaaattaaaaagccccagtggaaatgacggctgctgtgctgtgtgtgga
gacaatgcctcctgtcagcactacggggttcgcacctgtgaggggtgcaaggggtttttc
aagcgtacagtgcaaaaaaattccaagtatgtttgcctcgccaacaaggactgtactgtg
gacaagaggaggcgaaatcgatgccagttctgccgcttccagaagtgtctggctgtaggc
atggttagagaagttgtgagaacggacagtctgaaaggacgaagaggtcgcctgccttca
aagcctaaagtcgtcccagagatgacgaccactgtgtctccagtgagcatgatcgcttca
cttgtgagggcgcatattgactcaaaccctggcattgggaaactggattattccaagtat
agcgagacagacatcagtccaaaccagaaggaggatgctagtgacatcaaacagttttac
gacctcctcacggcctccttggaggtcatcaggatgtgggcgaagagcatcccaggtttc
tctgagttctgctcagaggaccaggaactgctgctggagtctgcatttgttgaactcttc
atcctccgtcttgcatatcggtccaatcctgaaacagaaaagctcatcttctgcaacggg
gccgtgcttcacaaaacgcagtgtgtccgaggctttggggattggattgactccatcttg
gagttttctcaaagccttcatcgcatgaagttagatgtttcctccttctcctgcctcaca
gccctggtcataatcactgaccgacatggtcttaaggagccaaaacgtgtggaggacctg
cagaaccagctcatcacctgcctcaaagatcacgtctctggctgcggctctgactccttg
cggcccaattatttgtccagacttctcgggaagctgcctgagctcaggactctgtgcact
caaggcctgcagcgaatcttttaccttaaattggaagatctcgttcccccaccgccaatt
gtggacaaaatcttcatggatacgcttccattttga
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