Lates calcarifer (barramundi perch): 108884299
Help
Entry
108884299 CDS
T04895
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
lcf04148
Efferocytosis
lcf04218
Cellular senescence
lcf04310
Wnt signaling pathway
lcf04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108884299
04020 Calcium signaling pathway
108884299
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108884299
09143 Cell growth and death
04218 Cellular senescence
108884299
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
108884299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108884299
Transcription factors [BR:
lcf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
108884299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
108884299
NCBI-ProteinID:
XP_018533649
LinkDB
All DBs
Position
LG4:complement(5188748..5202151)
Genome browser
AA seq
906 aa
AA seq
DB search
MGAAPGSGWEEGEFEFKLVFEEDPPPRQSQGPSPVRTAEPESSGPGEESEGALLHLDSSG
GSSLVTDNHLAATHAGHSISIPSPPSSASQRAGMHSPPPRRAPAREFSGTYESLPARSVQ
VSESRVVECPSIQITTISPEDDSAPTISSYWDMGGGGGWDRERLYLPLLDPFTYRDRCPG
SLSPSPASSPSSRGWLSPASSCDSLLVEEEELNEAAINFGLSPSSRPTSPGGKKRRNSPL
ASPCTSRRGSYSDELLGCNLEGGDSTPQSQAPPSSCELSIPQKTRKTSLEQLSPREVDQE
QAPGHSSPCPLPETQQTRREPPSPVMDYLSVPPALAWGRTRASAHSPLFRSNALPPLDWP
LPSQFDQYELRIEVQPRPHHRAHYETEGSRGAVKAAPTGHPVVKLCGYSERKPLSLQVFV
GTADDRSIRPHPFYQIHRVTGKMVGTASHESVQAGTKLLDIPLSPENNMTALIDCAGILK
LRNSDIELRKGETDVGRKNTRVRLVFRTHLPLAPPVAPPGRVLALQVASLPIECSQRSAQ
ELPVIESVSLTSCSVEGGEELLLSGTNFLPISRVLFMERGTDGKLQWEEEAHVDRDNSNE
CLLCVRVPAYSDLSVSRPVSVSLYVSNGKRKRSSTHCFKYLPIMFKEEDPLLSRPSVLPL
DRGTVCPVGGQPRMDRGFHVRGDPMADDRGIGFHLPPYPSTYSPPCPTMSYQDEYCSKPD
AAVEEPGGSRAALSERHPSFENLELGFTELLPPLYPRGPQPPSPSPSPWLDSPYLSSSPS
PSHSSSLSPFPAGSPISTSPLPPIPTSPYPQYSAYPQEVCPSPPSNPSPYQDICPAPYSH
YEGWDPQGRVLGMGHGGERDAKIQECPLEFTSSVSMHHITFEEVSEFIGEDIQSYQSDSH
MDNQPN
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggctcgggctgggaggaaggcgagttcgagttcaagttggtgttt
gaggaggacccgccgccgaggcagagccaggggccatccccggtgcgcacagccgagccg
gagagctccggtcccggggaggaaagtgagggcgccctgctgcacctggactcctccggc
ggcagcagcctggttacagacaaccacttggctgccactcatgcaggacactccatcagc
attcccagcccgccatcctcagccagtcagcgggctgggatgcattccccgcctccacga
cgggccccggccagagagttcagcgggacctatgagagcctgccagcgcgctctgtgcag
gtttcagagtctcgtgtggtcgagtgtcccagcatccagataaccaccatctcccctgag
gacgactcagcacccaccatttccagctactgggacatgggaggtgggggtgggtgggac
cgagagcgcctctacctccccctgctggatccctttacctaccgtgacagatgccccggc
tccctcagtcccagtcctgcctccagcccctcctcccgcggctggctgagtcccgcctcc
agctgcgactccctcctggtggaggaggaggagctcaacgaggccgccatcaattttggg
ctttcgccgtcatcaaggcccacttcccccggaggtaaaaagcgcagaaactcccccctg
gcctccccctgtacctctcggaggggcagttactcagatgaactgctggggtgcaacctg
gagggtggagactccacccctcagtcacaagctccacctagcagctgcgagctcagcatc
ccacagaaaaccaggaagacatctttggaacagttgtctcccagggaggtggatcaggag
caggctccaggccacagctccccctgccccctgccagagacccagcagaccaggagagag
cccccctcaccggtcatggactacctctctgtgccccccgctctggcgtggggcaggacc
cgagccagcgcccacagccctctgttcaggtctaatgctctgccgccactcgactggccg
ctgccgtcccagtttgaccagtatgagctgcggattgaggtgcaaccccgcccacaccac
agagcccactatgagacagagggcagcagaggagccgtcaaggccgcgccgacgggacat
cctgtcgtcaagctgtgtggatactcagagaggaaaccactctcacttcaggttttcgta
ggaacagctgacgacagatccatcagaccacatccgttctatcagatacacagggtgaca
gggaagatggtgggtactgccagtcatgagagcgttcaggctgggaccaaactgctggac
atccccctcagcccagagaacaacatgactgcactcatcgactgtgctgggatcctgaag
ctgaggaactcggacatcgagttgagaaaaggagaaacggatgttggcaggaagaacaca
cgtgttcgtttggtgtttcgtacccacctccctctagcgccccctgtagccccgcctggc
cgggtcctggctctgcaggtcgcctcgctgcccatcgaatgctcccagcgttcggcccag
gagctgcctgttatcgagtccgtcagtctcacttcctgctctgtggagggcggagaggaa
cttctgctgagtggcaccaacttcctgccaatctccagagtcctttttatggagagaggg
acagatggtaaattacagtgggaggaggaggctcatgtcgaccgtgataacagcaatgag
tgtttgctgtgtgtgagagttcctgcctacagtgacctgtctgtcagtcggcctgtgtca
gttagtctttatgtctccaacgggaagaggaaaagaagcagcactcactgcttcaaatat
ctccccattatgtttaaagaggaggaccctctgctgtcccggccttctgtgctgcctctg
gacagggggactgtgtgtcctgtgggtggtcaacccaggatggacagaggcttccatgtg
agaggtgacccaatggctgatgaccgaggcattggtttccacctgcccccttacccctcc
acctactctccaccctgccccaccatgagctaccaggacgagtactgctctaaacccgat
gctgcggtggaggagcccggcgggtccagagcagccctgtccgagcgtcaccccagcttc
gagaacctggagctgggcttcaccgagctcctcccccctctgtacccccgtggcccgcag
cctccatccccttccccttctccgtggttggactcaccctacctgtcctcctcaccctct
ccctcccactcctcctctctcagcccgttccctgccggcagtcctatctcgacctccccc
ctgcctcccatccctacctctccttacccccagtactctgcttatcctcaggaggtgtgt
ccctcccctccctccaacccaagcccctatcaggacatctgcccggcaccttactcccat
tatgagggctgggacccccagggaagggtgctggggatgggacatgggggagagagggat
gccaagatccaggagtgccccttggagtttaccagctcagtgtctatgcaccacattacc
tttgaggaagtatcagagttcattggagaggacatccagtcttaccagtcagactcacac
atggacaaccagccaaactga
DBGET
integrated database retrieval system
