Lates calcarifer (barramundi perch): 108885269
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Entry
108885269 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: caskin-2-like
KO
K21952
CASK-interacting protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108885269
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
108885269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Caskin-Pro-rich
Ank_4
Caskin-tail
SAM_2
Ank_5
Ank_3
Caskin1-CID
SH3_2
SH3_9
SH3_1
Motif
Other DBs
NCBI-GeneID:
108885269
NCBI-ProteinID:
XP_018535051
LinkDB
All DBs
Position
LG23:complement(709878..747510)
Genome browser
AA seq
1490 aa
AA seq
DB search
MGKEQDLLVAVKSGDLLLAHKLLSKVKCSKTKLLGSTKRLNINYQDSDGFSALHHAALTG
TTELLSLLLEAQATVDIKDINGMRPVHYAAWQGKADSVLLLLRAGASVNSPSHDGQIPLH
LSAQYGHYDVSEMLLQHQSNPCLMNKAKKTPLDLACEFGRLKVAQLLLSSNMVAALLEGE
GGHDGLDSPTTTPLHLAARNGHKDIIKLLLKAGIDINRTTKAGTSLHEAALYGKTEVVRL
LLDAGINVNIRNTYNQTALDIVNQFTTSTASREIKQLLREASSSLQVRAVKDYWNLHDPT
ALNLRAGDLIMVLEQHSDGRWKGHIHDTQRGTDRVGFFPPSVVEVLSRKAGGTLSRQASM
PCHRQHFASRAPPSSHGPAPQTDDSYTLGYDPAGAPPGSQLSAPASPASPTQDIWVLRRS
PTGDRNSVGSAGSVGSSRSAGSGQSSESSHKQNGTQNRHNTDTGKPAPSAGESGDHLHSA
GADRSKQVDGSSGGSRRQVNGTPQKGFIRPEQLLEGKDAEAIYQWLCEFQLEQYTSNFIN
AGYDVPTISRMTPEDLTAIGVTKPGHRKKISMEIGKLSIPEWLPDYIPSDLGEWLSVIGL
PQYQKRLCDNGYDSITIVKDITWEDLQEIGITKLGHQKKLMLAVKRLSDLQRARNHADRS
GGGTLRRKPPAALELVAIEHTPTHNAHAHTHSDAPSDNCCPSPRTPRALLSFQDSELSAE
LQSAMMGRAGGGATEAFGIRGVTSAAAISAMSVSQESISMRSRGSGNSGNSGHSNSGYSQ
EHQATPSSARTASRSEESLGSGGGSPGGRSRQRPTEMWEHQSRSVTPNKLPFSPLTPPLT
PSKMPRFAYPAVPPKAKHFQSPNRLHQPQHHPPSSPSSPSPQPSPTQKNFSYLHAQTGGI
NGAPRVLSKPLPGAVPVLGPQPGQAPADDTQRCLQKKRAQSLTRYALSDGEPDEDDDLAP
RCTSASSAAMPSYATLSRRPGRGHTSATGAQRHINRSHSFAVRSRRKGPPPPPPKRMSSV
SGSPTRQPGNGKVTEPEVKAGVEVESAGSVRSIAARLEGSSSSSSPSRRIDIPPTHIPQS
PVFSPVSSPIPHGIPSHIILMHSKPVPALGLGGLRRTGSERTEGDAERQRGGGTDGTSEE
REKARRSERTSKSAAASPKHSSSDHLPFAEEGNLTIKQRPRVAVVTRADAEVKTPPEDPV
QTPNNLELPEFNLKESDTVKRRHKPKDKDASTPEEPSTPSKDDNRPQITNHNGSTHIDVR
TQSEDEAQRNVFQRVGSMGKGPKPPVSSKPSSPLSRPTTPQKTVCSAQGSAQTAIPKLTS
VQIHTVSPKLGGSIHTQTCLPSPKAVRHPQTPMSKPESPQRAAAASRLPQLSTASASAPG
PNVSMVQSVTFAAPSSPVHPPSYSTSALPGPMGKAGAAQAGVAGLEVLAQKRLEQTSTSL
EAALKVVENKLAQGSSVDGDSSTVKAAGNILDDISNMFDDLADQLDAMLE
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagcaggatctgctggtggcagtgaagagtggggatcttcttctggctcac
aagcttctctccaaagtcaagtgcagcaaaaccaagttgctgggttccaccaagaggctc
aacatcaactaccaagattcagacggcttctccgcactgcaccacgccgctctgacgggc
accacggagctgctgtctctgctgctggaggcccaggccaccgtggatatcaaggacatc
aacggcatgcgtcccgtccactacgcagcgtggcagggtaaagctgactctgtcttattg
ttgctgagagctggtgcttcagtcaactcgccgtcccacgatggacagataccgttacat
ctctctgctcagtatggacattacgacgtgtctgagatgttgctgcagcaccagtcgaac
ccctgcctgatgaacaaggcgaagaagacgccgttagatctggcctgtgagtttgggagg
ctgaaggtggctcagctgctgctgagcagtaacatggtggcagcgctgctggaaggcgag
ggagggcacgacggcctggactctccgacgaccacaccgctccacctggcagccaggaat
ggacacaaggacatcatcaagttgctgctcaaagctggtattgacatcaacagaaccacc
aaagcgggaacgtctctgcatgaagctgccctctacggcaagactgaagtagtgcggctg
ctgcttgatgcgggcatcaacgtgaacatacgcaacacctacaaccagacagctctggac
attgtcaaccagttcaccacttctacagccagcagggaaatcaaacagctgctcagagag
gcatcaagttctctccaggtcagggcggtgaaggattactggaacctccacgaccccacc
gcccttaacctccgggcaggagacctcattatggtcctggagcagcactcagacggccgg
tggaagggtcacatccacgatactcagcggggcacggatcgagtgggcttcttccccccg
tcagtggtggaggtcctcagcagaaaagcagggggcactctctcccgccaagcctccatg
ccctgccaccgacaacactttgcatccagagctcctccctcaagccacggccccgcccct
cagaccgacgactcatacacgcttggctatgatcccgcaggtgctccaccaggcagtcag
ctctcagccccagctagtcctgctagtcccactcaggacatttgggtcctcaggagatcc
cccactggtgacaggaacagtgttggcagtgccggcagtgtgggcagcagtcgcagcgcc
ggcagcggccagagctctgaaagcagccacaaacagaacgggactcagaatcgccacaac
actgacactggcaagccggcgccctctgctggtgaatccggagaccatctccacagtgca
ggagctgaccgcagcaaacaggtcgatggatcctcaggtggttcgcggcggcaggtcaac
ggcactcctcagaaaggcttcattaggcctgaacagcttctggagggcaaggacgctgag
gccatctaccagtggttgtgtgagttccagttggagcagtacacatccaacttcatcaac
gcaggatatgatgtacccaccatcagcaggatgacgcctgaggacctgacggccatcgga
gtcaccaaacctggccacaggaagaagatctcaatggagatcggcaagctcagcatccct
gagtggctgcctgattacattccttcggacctcggggagtggctgagtgtgattggactt
cctcagtaccagaagagattgtgtgacaacggctatgactccatcactattgtcaaagac
atcacctgggaggacctgcaggagatcggcatcaccaaactaggtcatcagaagaagcta
atgttagcagtgaaaagactctctgaccttcagcgcgctcggaaccatgccgacagaagt
ggaggcgggactctcagacggaagcctcccgccgctctggagctggtggctatcgaacac
acgccaacacacaacgcgcacgctcacacacactctgacgctccgtctgacaactgctgc
ccctcccctcgcacgcccagggccctcctctccttccaggacagcgagctgagcgccgag
ctgcagagcgccatgatgggcagggctggaggcggagccacagaggcgtttggtatcagg
ggcgtgacctctgcggcagctatatccgccatgtcagtcagtcaggagagcatcagtatg
aggtcacgtggctcagggaattctgggaattctggacattcaaattcaggatattctcag
gagcaccaggccacaccgtcgtctgccagaacggccagccggtctgaggagagtctgggc
agtggaggaggtagtcctggaggcaggagtaggcagagacccacggagatgtgggagcac
cagagtcggtctgtgacccccaacaagctccccttctcccccctcactcctccgctcacc
ccgagcaaaatgcctcgcttcgcctacccagctgtcccgcccaaggccaaacacttccag
tccccaaaccgcctccatcagcctcagcaccacccaccctcctccccttcctctccgtct
ccacagccctcccccacacagaagaacttcagctacctccacgctcagacaggaggcatc
aacggggctcctcgggtgctctccaagcctctgcctggagctgtccccgtgctgggaccc
cagcccggccaggccccagctgacgacacccagaggtgcctgcagaagaagcgcgcccaa
agcctgactcgctacgccctgtctgacggggagccggacgaagacgacgacctcgctccc
cgctgcacctcggcttcctccgcggcgatgccctcctacgccaccttgtcgcgcaggccg
ggacgtgggcacaccagcgccacaggggcccagcgccacatcaaccgcagccactccttc
gctgtgcgctcccgacgcaaaggcccgcccccaccgccacctaagaggatgagctcggta
agcggcagcccgacacggcaaccgggaaacgggaaagtgacggagccggaggtgaaggca
ggagtggaggtggaaagcgccggcagcgtgaggagcatcgcagccagactggagggaagc
agcagcagcagcagtccatccaggaggattgatattccaccaactcacatccctcaatca
cctgtctttagtccggtgtcctccccgattccacatggaattccttctcacatcattcta
atgcacagtaaacctgtccccgccttgggccttggtggcttaagaaggacaggaagtgag
aggacagaaggagacgctgagagacagagaggtggaggtacagacgggacatctgaggag
agagagaaagcaagaagaagtgagagaacgtcaaagagtgctgctgcgtctccaaagcac
agctccagcgaccatcttccctttgcagaggagggtaacctcaccatcaaacagcggccc
agggttgcagtcgtcacccgggccgacgctgaagttaagactcctccagaggatccagtc
cagaccccaaacaacctggagctgccagagttcaacctgaaagagtctgacacagtgaaa
agacgacacaaacccaaagacaaagatgcgtccaccccagaggagccgtctacacccagc
aaagacgacaaccgcccacaaatcacaaaccacaacggaagcacacacattgatgtcagg
acacagagcgaagacgaggctcagagaaatgttttccagagggtgggctccatgggaaaa
ggcccgaagcctccggtgtcctcaaaaccctccagtcctctcagcagaccgacgacccca
cagaaaacagtctgctcagcacaaggcagcgcgcagacagccattcctaaactaaccagc
gtacagattcacaccgtctcaccgaagctgggcggcagcatccacacgcagacatgtcta
cccagtcctaaagctgtcagacacccgcagacgccgatgtccaagcctgagagtccacag
agagctgctgctgcatccagactccctcagctcagcacggcctctgcatcagcaccagga
ccgaacgtcagcatggtccagagtgttacattcgccgctccgtcctctccagtgcatccc
ccttcatactccacctctgcactgccgggcccgatggggaaagctggagcggcccaggcc
ggagttgcaggtctggaggtcctggctcagaagaggctggagcaaaccagcacgtcactg
gaggctgctctcaaagtggtggagaacaaactggcacaggggagcagtgtggacggtgac
agcagcacggtgaaggctgcaggaaacattctggacgacatcagcaacatgtttgatgat
ctggccgaccagctggacgccatgttggagtga
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integrated database retrieval system
