Lates calcarifer (barramundi perch): 108885807
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Entry
108885807 CDS
T04895
Name
(RefSeq) POU domain, class 6, transcription factor 1 isoform X2
KO
K09368
POU domain transcription factor, class 6
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108885807
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
108885807
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
HTH_31
DUF3612
Motif
Other DBs
NCBI-GeneID:
108885807
NCBI-ProteinID:
XP_018536152
UniProt:
A0A4W6FGA1
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All DBs
Position
LG6:22300641..22310383
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AA seq
628 aa
AA seq
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MNSQDLPAKDAPLTVNEQVIVMSGHETIRVLEVEVDASLPASVNDGKSEGKAEEGVAQAT
AEQTEGGSTQDGPTVPQSSGGIVLGEQQVVSVEAPAPTVQTLTPAVPISVSLPQTQATMP
ITVQGCPQVLTQDSLATLMTGMMAQTGSLGQPLLIPLSMAGSIGGQGSLAVLTLPTTNVA
TLPGLTAANPAGNLLKLPFAGLQAATVLNSVQPQLQTNAQTLFQPQAASMQPVQQAAVQQ
VMSQPTQVTTAQVSAAQVAAAQATSATTTVSQSNISVAALQTAGLSINPAIISAASLGAQ
PQFLSSLASTPIITSAMSNMAGITSQIITNAQGQVIGTLPLLVNPASLAGGAATPTLPLQ
GLQVQTVTPQLLLNTQGQIIATVGNGPATVATSAAVLPKAAAPPTLTKPNTQASVTSVTQ
SPVVIAPQPSVLKTTTTLSSTAPITCGDIAKVGQLVSKPQQVVSSEEGINLEEIREFAKN
FKIRRLSLGLTQTQVGQALTATEGPAYSQSAICRFEKLDITPKSAQKLKPVLEKWLAEAE
HWNQKGQQNLMEFVGGEPSKKRKRRTSFTPQAIEVLNSYFEKNALPTGQEITEIARELNY
DREVVRVWFCNRRQTLKNTSKINVFQVQ
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaactcccaggatctccctgccaaagatgccccacttactgtcaatgagcaggtcatt
gtgatgtccggccatgagacaattcgtgtgctagaggtagaggttgatgcatctctgcca
gcatcagtaaacgatgggaagagtgaaggcaaagctgaggagggagtggctcaggccacc
gcggagcaaaccgagggcggcagcacccaggacggccccactgtgccccagagctccggg
ggaatagtgctcggtgagcagcaggtggtgtctgtagaggcccctgcccccaccgtccaa
acgctgactcctgctgttcccatcagtgtgtctctgccgcagacacaggccaccatgccc
atcactgtacaaggctgtccacaggtgctgacccaggacagtctggccacattgatgact
ggtatgatggcccagacagggtcactgggccagcccctgctcatccccctgagtatggca
ggctccatcggtggccagggcagtctggctgtcctcaccctccccaccaccaatgtagct
actctccctgggctcacagcagcaaacccggccggaaacctcctcaagctgccctttgct
ggcctccaagctgcgacagtcttgaactcagtccagccccagctgcagacaaatgcacag
acattgttccagcctcaagcagcctccatgcagccagtccagcaggctgctgtgcagcag
gtgatgtctcagccaacacaagtgaccactgcccaggtttctgctgctcaggtggcagct
gcccaggcgacctcggccaccaccactgtttctcagtccaacatatctgtggcagcgctg
cagaccgcgggactctccatcaatcctgcaattatcagtgctgcttccttgggagcacaa
ccccagttccttagttcccttgcctctactcccatcatcaccagcgccatgtccaacatg
gctggcatcaccagccagatcatcacaaatgcccagggacaggttataggaaccctccca
ctgttggtgaacccagcttctctggctggaggggctgcgactcccaccctccccctccag
ggactccaggtccagactgtcaccccacagctgcttctcaacacccagggtcagatcatt
gccactgtagggaatggacctgccacagttgccacttctgctgcagttctgcccaaagcc
gctgctccgccaacactcaccaagcctaacacacaggcttcggtaactagtgtcactcag
tcgccagttgtcatcgccccgcagccgtctgtactgaagaccaccaccacgctctcctcc
acggcacccatcacttgtggagacatagcaaaagtgggccagcttgtcagcaaaccccag
caggtagtcagcagcgaggaaggcattaatctggaggagatccgagagtttgccaagaat
ttcaagatccgtcggctgtccttggggcttactcagacacaagtaggacaggctctgact
gcaaccgaaggtccagcttacagccagtctgccatttgcaggtttgaaaagctggatatc
acccccaagagcgcccaaaagctaaagccggtgttggagaagtggctggctgaggctgag
cactggaaccagaaaggccagcagaatctgatggagtttgtcggcggagaaccctccaaa
aaacgcaagcggcgtactagtttcaccccacaggcaatagaagttcttaactcctacttt
gagaagaacgcactgccgacgggtcaagagattactgagattgcaagagagctaaactat
gaccgagaggttgtgcgagtatggttctgcaaccggcgacagacgctgaaaaacacaagc
aaaatcaatgtcttccaggttcagtag
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