Lates calcarifer (barramundi perch): 108886373
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Entry
108886373 CDS
T04895
Symbol
rapgef3
Name
(RefSeq) rap guanine nucleotide exchange factor 3 isoform X2
KO
K08014
Rap guanine nucleotide exchange factor 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108886373 (rapgef3)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
DEP
cNMP_binding
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
108886373
NCBI-ProteinID:
XP_018536765
UniProt:
A0A4W6FIU0
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Position
LG6:complement(22388608..22411159)
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AA seq
868 aa
AA seq
DB search
MHLFRSHNYQVFPDRYSVETPTIRGISWTPLPEALDSKDTMKQFLSDRVVKAARSVYSVM
IERNPGLIRDRKYHLKTYRQCCSGKELVDWLMKQNECLQSRSQAVGMWQVLVDEGILVHV
KHELNFLDKDTQFYRFQDSEFGLNHITNEKDSEDELQEGLSLLSQLGPDALLTMILRKCP
SQRSAEDLEVIYEELLHVKAAAHLSASVRKELAAVLVFESHAKAGTVLFSQGDKGTSWYI
IWKGSVNVITHGKGLVTTLHEGEDFGQLALLNDAPRAATIILREDNCHFLRVDKQDFIRI
LKDVEANTVRLEEHGKTVLVLEKSADSAQQGGAGSSSKYTVMSGTPEKILEHLLETVKLD
SNGNDAIDPCVSDFLLTHKVFMPSSQLCPALQHHYQAELSEGSDQEKAAYILNTKQKVVK
LVGQWVALYGLLLKEDPVALDFLERLKKEVAGDFRLSSLLKEQFRERRRTKVMENGYQSL
SRSQQFDWFSNCEEPAVRLQPIRAQDKVLYEIYRPDSKPLTLMLPVNTSVQDVMSAIVKP
GGDHILVKMNSTGERAQLKLDATAFYTALGLNERLFICTSSQVEQLMPLKEQQGPERGTT
DILEQMGSKDIANELTNYDWELFTAMHEVELIHYIFGRHKFPGAITANLERFVRRFNEVQ
YWVVTELCLCEDLVKRAILLKKFIKIAAVLKEQKNLNSFFAVMFGLSNSAVQRLYKTWER
IPSKTKRIYCAYERLMDPSRNHRAYRLAVAKLSPPYIPFMPLLLKDMTFIHEGNPNYVEK
LVNFEKMRMIAKTVKIVRGCRSQPYVPSSPQRGLADRMFLEGPAARISTYSDHGLPLRSP
SNIRHYIQNLKVIDNQRKLTQLSRTLEC
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgtttcggagtcacaattatcaagtgttcccggaccgctactcggtggaaaca
ccgaccatacgaggcatcagctggactccactgccagaggccttggattcaaaggacact
atgaagcagtttctttcagatcgtgttgtgaaggcagcgagatcggtgtatagcgtcatg
atcgagaggaaccctggtctgatccgagataggaagtatcacctcaaaacatacaggcag
tgttgttctggtaaagaacttgttgattggctgatgaaacagaacgaatgcctccaatca
agaagtcaggcagttgggatgtggcaggtcttggtggatgaaggaatccttgttcatgtg
aaacatgagctgaacttcctcgacaaggacacccagttctaccgcttccaagactctgag
tttggtctgaaccacataacgaatgagaaggattcagaggatgagctgcaggaaggactg
tcactgctgtctcagctgggtcctgatgctctgctcactatgattctacgcaaatgcccc
agtcagaggagtgctgaggacctggaggtcatctatgaggagctgctccacgtcaaggct
gctgctcatctctctgcctccgtgcgtaaggagctggcagcggtgctggtctttgaatca
catgccaaggccggaacagtcttgttcagtcagggggacaaaggcacttcatggtacatc
atctggaaaggctctgtaaatgtgatcacacatgggaaggggctggtaactactctacat
gagggtgaggactttgggcagctagctttgctgaatgacgcacctcgtgctgccaccatc
atcttgagagaagacaactgccatttcctccgtgttgataaacaggacttcatacgcatc
ctcaaggatgtggaggctaatacagtgcgactggaggagcatgggaaaactgtgctggtg
ttggagaaaagcgccgactcggcccagcaaggcggagctggaagcagcagcaagtacaca
gtcatgtcaggaacacctgagaaaatcctggaacacctgctggaaacagtaaagctggat
tctaatggaaatgatgctatagatccctgtgtgagtgacttcctcctcacccataaagtc
ttcatgccctccagccagctgtgtcctgcactacagcaccattaccaggcagagctctct
gagggttcagatcaggagaaggctgcttacattctcaacaccaagcagaaggtagtgaag
ttggttggccagtgggtggcgctgtatggccttctactgaaggaggaccctgtggctttg
gactttttggagaggttgaagaaggaggtggccggtgatttccgtctgtccagcctgctg
aaagaacaatttagagaaaggaggagaacaaaagtgatggagaatgggtatcagtcactg
agcaggagccagcaatttgattggttttcaaactgtgaggagcctgcggtgaggttacag
ccaatcagagcacaggataaagtgttgtatgagatctacaggccagacagcaaacctctc
actctgatgcttccagtcaacacatcagtacaggatgtgatgtcagcgatagtcaaacct
ggcggagatcacatcctggtcaaaatgaactccacaggagaaagagctcagttaaagcta
gatgccactgcattctacaccgccttgggactcaatgaaagactgttcatctgcacaagc
agccaagtggaacaactgatgcccctgaaggagcagcagggtccagagcgaggaactaca
gacatccttgaacagatgggctctaaagatatcgccaatgaactcaccaattatgactgg
gagctgttcactgccatgcatgaggtggagcttatccactacatatttggccgtcataaa
tttcccggtgccatcacagctaacctggagaggtttgtgcgtcgcttcaatgaggtgcag
tactgggtggtgactgagctgtgcctctgtgaagacctggtgaaaagagccattctgctt
aagaagttcatcaagattgctgcagtcttaaaggagcagaagaatctcaattcattcttc
gctgtgatgtttggtttgagcaacagtgcagtacagaggctttacaagacctgggagaga
atacccagcaagacaaaaagaatctactgtgcttatgagaggctgatggatccttcacgc
aaccacagggcctacagactggctgtggccaagctcagtcctccttacatccccttcatg
cctctgctgctcaaagacatgacattcatccatgagggaaacccaaactatgtagagaaa
ttggtcaattttgagaagatgcgaatgattgccaagacagtgaaaattgtacggggatgc
agaagccagccttatgtgccttcatctccacagaggggcctggcagatcggatgtttctg
gaagggcctgctgctcgcatatctacatactcagaccacggcctccctctgcggagtccc
agcaacatccgacactacatccagaacctgaaggtgattgacaaccagcgcaagctaaca
cagctatcaagaacgttagaatgctag
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