Lates calcarifer (barramundi perch): 108886749
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Entry
108886749 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108886749
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108886749
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
108886749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
BRE1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_5
SpoIIE
Motif
Other DBs
NCBI-GeneID:
108886749
NCBI-ProteinID:
XP_018537278
LinkDB
All DBs
Position
LG23:complement(7233795..7246175)
Genome browser
AA seq
1002 aa
AA seq
DB search
MSGAGGGKRPSGGDSPPGPPEKKSKKEEKTTTTLIEPIRIAGVSSTEEMDMKVLQFKNKK
LCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIVNRYWSQLEENVHILRKRIEPEAPA
TSTPAPPSVPLSDPSPMEEDSVNLASPTSAVPPPPLPEAQNEGEQAEQQQQEECQEERQE
EQQQPPPPSGSEELMTPTEPSQDSTTDASPPPPPLSENAKGFLATLEQSSEEELTLHLQD
RMLFSKEAIACLVCVFDRLHSRIDSMCKQVQAAACEDDSQSDIISVNHTLLEENSRLRDL
ATLLQGRHHKMSMEYNELVDKVTSSETKVSEMETTVEDLQWDIEKLRNREQKLNKHLAEA
MEQLKSGYSSTGSSGGLPGGQITLNIQKFESLNAELEHNQELANSRMAELEKLQVELQEA
VRESEKLKMDLRNIPEEVVKETLEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKNAH
LRQIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREM
RHLISSLQNHNLQLKGDVQRYKRKLRETQMEINKLRCQSGDTGVLILEETTSDSIDVKKE
EDEDQEEEEERRKELERQRAREREREAERERERERERERQRSDELKRKDSDTLKMLRVEL
KKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDELRMRVRELEERERKESK
KLADEDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSRLLQQL
REKDDANFKLMSERIKSNQIYKLLKEEKEELADQVLTFKTQVDAQLLVVQKLEEKEGVLQ
STLAALEKELAVRTQALELNKRKAVEAAQLAEDLKVQLEHTQAKLKEIQVSVAENRTARE
RESSNLKRAQEDLSRLRRKLEKQKKVEVYSDADEILQEEINQYKAKLRCPCCNTRDKETV
LTKCFHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgctgggggaggaaagcgtccctcaggaggggacagcccccctggcccacct
gagaagaaaagcaaaaaagaggagaagaccaccaccactcttattgagcccattcgcata
gctggagtctcttctacggaggaaatggacatgaaggtgctccagttcaagaataagaag
ctatgtgaacgcttggagcagagacaggcgatggaggatgagttacgagagaaaattgag
aaactggagaagagacaagccactgatgacaccacactgctgattgtcaaccgctactgg
tctcagttggaagagaatgtgcacattctacgcaaacgcattgagcccgaagctccggcg
acatctacccctgccccaccctctgtccctctctctgatccctcgccaatggaggaagac
agtgtcaatctggcttcaccaacctctgctgttcctccacctccacttccagaggcccag
aatgagggggagcaggcagagcagcagcagcaggaggagtgccaggaagagcgtcaggag
gagcagcagcagccccctcctccttctgggtcagaagagttgatgacaccgacagagccg
tcacaggactcaacaacagatgcatcgccacctcctcctcccctgagtgagaatgccaag
ggtttcctggctacactggagcagagcagcgaggaagagctcacccttcacctccaggat
cgcatgctgttcagcaaggaagccatcgcctgcttggtctgcgtctttgacaggctgcac
agccgcattgacagcatgtgcaagcaggtccaggctgcagcatgtgaggatgatagccag
tctgacatcataagcgtgaaccacactctgctggaggagaacagtcgactgcgagacctg
gccactctcctgcagggccgacaccacaaaatgtctatggagtacaatgaactggtggac
aaggtgaccagctctgagaccaaggtgtctgagatggagacgacagtggaggacctacag
tgggacattgagaaactgcgcaatcgggaacaaaagctcaacaaacatctggcagaggcc
atggagcagctgaagtctggatacagcagcaccggcagctcaggtgggctacctggaggc
cagattacactgaatattcagaagtttgagagtctcaatgcagagttggagcacaaccag
gagttggcaaatagtcgcatggcagagttggagaaactgcaggtagagctgcaggaggct
gtgagggagagcgagaagctcaagatggacttgcgcaatattccagaagaggttgtgaag
gagactctagagtataaatgtctgcagtctcagttctccctgctgtacaatgagtctctc
ggggtcaaaacccagctggatgaggcgcgggctctcctgctcactgcaaagaacgcccac
ctccgacagattgagcacatggagagtgatgagctgtcccttcagaagaagctgcggact
gaggtcatccagctggaggataccttggcccaggtgcgcaaagagtatgagatgctgcgc
attgagtttgagcagaacctggcagcaaacgagcaagcaggaccaatcaacagggagatg
cgacacttgatcagcagccttcagaaccacaacctgcagttgaaaggtgacgtgcagcgt
tataagaggaagttgcgggaaacacagatggagatcaataagttgcgttgtcaaagtggc
gacacaggggtgctgattctagaggagacgacaagcgatagcatcgacgtgaagaaagag
gaggatgaggaccaggaggaggaggaggagaggaggaaggaactggagagacagcgagct
agggagagggagagggaggccgagcgagaacgagagagggagcgtgagagagagagacag
cgcagcgacgagctgaagaggaaagactcggacacactgaagatgctcagagtagaactc
aagaaagcccaggagtcccagaaagagatgaagctcttgttggacatgtacaagtcagct
ccaaaggagcagagggataaagtgcagctcatggcagctgagcgcaaatctaaagctgag
gtcgatgagttgaggatgagagtgcgagagctggaggagagggagaggaaggaaagcaag
aagctggctgatgaagatgccctcaggaagatcagagttgcagaggagaccattgagcat
ctgcaaaagaaacttgctgccactaagcaggaggaggaagccctgctgagtgagatggat
gtaacaggccaggctttcgaggacatgcaggagcagaacagccggctgttgcagcagtta
cgggagaaggatgacgccaatttcaagctgatgagcgagcgaatcaaatcaaaccagatc
tacaagctgctgaaagaggagaaggaggaactggctgaccaagttctcacattcaaaacc
caggtggatgcccagctgctggttgtgcagaagctagaggaaaaagagggtgtcctgcag
agcacgctggctgctctggaaaaagagctggctgtccgaacacaagcactagaactcaac
aagaggaaggcggtggaggctgcccagctggcagaggacctgaaggtgcagctggagcac
acacaggccaagcttaaggagatccaggtctccgtggcggagaaccgtacggcccgggag
agggagagcagcaacctgaaacgagcgcaggaggatctgtccaggctgagacggaagctg
gagaaacagaagaaggtggaggtttactctgacgctgatgaaatcctgcaggaggagatc
aaccagtacaaggccaagctgcgttgcccctgctgcaacacgcgagacaaggagacggtg
ctcaccaagtgtttccacgtcttctgctacgaatgtctgaagatgcgttacgacacccga
cagagaaagtgccccaagtgcaactgtgccttcggagccaacgacttccaccgcatctac
atcacctaa
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