Lates calcarifer (barramundi perch): 108887225
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Entry
108887225 CDS
T04895
Symbol
esr2a
Name
(RefSeq) estrogen receptor 2a isoform X1
KO
K08551
estrogen receptor beta
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108887225 (esr2a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lcf03310
]
108887225 (esr2a)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
108887225 (esr2a)
Nuclear receptors [BR:
lcf03310
]
3. Estrogen like
3A. Estrogen receptor
108887225 (esr2a)
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Gene cluster
GFIT
Motif
Pfam:
ERbeta_N
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108887225
NCBI-ProteinID:
XP_018538032
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Position
LG7_1:complement(5550071..5566001)
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AA seq
565 aa
AA seq
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MATASPEKDQPLLQLQEVDSSRVKNRVLSPILSSSSSPGPSLETSQPICIPSPYTDIGHD
FTTIPFYSPTIFSYAGPSISDCPSVHQSLSPSLFWPSHGHMGPPIPLHRSQARPQHSQPI
QSPWVELTPRDSVLTASKSGRRRSQESEEGVVSLGGKADLHYCAVCHDYASGYHYGVWSC
EGCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRKCCEVGMTKCGMRKEHGNY
RNSKTRRLTRLSSQSRANGPKPLTGPVEGLLNELQPPALTPEQLIERIMEAEPPEIYLMK
DMRRPLTEANVMMSLTNLADKELVHMISWAKKIPGFVELSLLDQVHLLECCWLEVLMIGL
MWRSVDHPGKLIFSPDLSLSREEGSCVQGFLEIFDMLIAATSRVRELKLQREEYVCLKAM
ILLNSNMCLSSSEGSEELQSRSKLLRLLDAVTDALVWAIAKTGLTFRQQYTRLAHLLMLL
SHIRHVSNKGMDHLHCMKMKNMVPLYDLLLEMLDAHIMHSSRLPRRTPQEESAEQKEVPA
LPPGSGSGPSNTWTPSSAGGGAEPQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcctctccagaaaaggaccagcccctgctgcagctccaggaggtggactcc
agccgagtcaaaaatcgtgtcctctccccgatcctcagctcctcctcttctcccggtccg
tctctagagaccagccagcccatctgcatcccctccccttacaccgacatcggccatgac
ttcaccaccatacctttctacagtcccactatcttcagttacgccggtcccagcatttca
gactgtccctctgtccatcagtcactaagcccctccttgttctggcccagtcacggccac
atggggccacccatacccctgcaccgctcccaggcccgaccccagcacagccagccgatc
cagagtccgtgggtggagttgacgccgcgggacagtgtcttaacagccagcaagagcggg
aggaggcgttcccaggagagcgaggagggcgtggtgtcgttgggcgggaaggcagacctc
cactactgcgctgtgtgtcacgactacgcctcgggctaccactatggagtgtggtcatgt
gaggggtgtaaggcctttttcaagaggagcatccaaggacacaatgactacatctgtcca
gcaaccaatcagtgcactatagacaagaaccgtcgtaagagctgccaggcgtgtcgcctt
cgcaagtgctgtgaagttggcatgaccaagtgtggtatgcgaaaggagcatggaaactac
aggaactccaagacgaggcgactgacccgtctgtcctcgcagagcagagctaacggacca
aagcctttaactggaccagtggagggtttgttaaacgagctgcagccgcccgcgctgacc
ccagagcagctgatcgagcgaataatggaggcagagccgccggagatctacctcatgaag
gacatgaggaggccgctgaccgaggctaatgtcatgatgtcgctcaccaacctggctgat
aaggagctggttcacatgattagctgggccaagaagattccagggtttgtcgagctcagt
ctcttggaccaggtgcacctgctggagtgctgctggctggaggtgctgatgatcggactg
atgtggaggtcagtggaccatccagggaaactcatcttctcccctgacctcagcctgagc
agagaagaggggagctgcgtccagggcttcctggagatctttgatatgctcatagctgcc
acgtccagggtgagagagctcaagctgcagagggaggagtacgtctgcctcaaggccatg
atcctcctgaactccaacatgtgcctcagctcctcagaaggcagcgaggagctgcagagt
cgctccaagttgcttcgtcttctggatgctgtaactgacgctctggtgtgggccatcgct
aaaaccggcctcaccttccgccaacagtacacccgcctcgcacacctgctcatgctgctc
tcgcacatccgccacgtgagtaacaaaggcatggaccacctccactgcatgaaaatgaag
aacatggtgcctttgtacgacttgttgctggagatgttggatgcccacatcatgcacagt
tcccgtctgcctcgccggactccccaggaggagtccgcagagcagaaggaggttcctgct
ctgcctcctggctctggaagcggaccctcaaatacctggactcccagcagcgctggaggt
ggagctgaaccccagtag
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