Lates calcarifer (barramundi perch): 108887354
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Entry
108887354 CDS
T04895
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1A isoform X1
KO
K03158
tumor necrosis factor receptor superfamily member 1A
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04060
Cytokine-cytokine receptor interaction
lcf04150
mTOR signaling pathway
lcf04210
Apoptosis
lcf04217
Necroptosis
lcf04920
Adipocytokine signaling pathway
lcf05132
Salmonella infection
lcf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108887354
04150 mTOR signaling pathway
108887354
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108887354
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108887354
04217 Necroptosis
108887354
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108887354
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108887354
09171 Infectious disease: bacterial
05132 Salmonella infection
108887354
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
lcf04050
]
108887354
04090 CD molecules [BR:
lcf04090
]
108887354
Cytokine receptors [BR:
lcf04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
108887354
CD molecules [BR:
lcf04090
]
Proteins
108887354
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
Wzz
DUF6480
DUF4342
Motif
Other DBs
NCBI-GeneID:
108887354
NCBI-ProteinID:
XP_018538257
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All DBs
Position
LG15:complement(10215567..10222228)
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AA seq
395 aa
AA seq
DB search
MEGAGPRGRRNITAPVGTILLLVCMFIPALAALQSTVQPKCKSWEYDNEKGHCCDKCHAG
FKLLEVCHGDGQRSKCVPCPDRQYTDQINYSPNCRSCSTCKKNEILTKPCGRSQNTICQC
KDGYYKAFIDSGTYECRKCTKCGPDETTIKTCTPEQNTVCECKENYYRVMRKCEPCKSCG
PQCSQHCTPSVQNTKDPDTTVNEFPVNIIIGVGAVVLVLFVLAVLVTYMATKWFTKQTLL
QPSSQPSDVSPDSCEQVLISGEEPLDNSSVKAIPKIPTTEQEPSNLPDCVPLEINISDLI
YTVLDLVPVLQVKQLVRILGVRDTEIEQAELDNRSCREAHYQMLRVWAERGSHVGGGGRR
GGMLHRPLLQELLDKLRQMHLGRAAEELETKYGIQ
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggagggagctgggcccagaggaagacggaatataacagctcctgtgggcacaatactg
ctcctcgtgtgcatgttcattcccgctttggcagcattacaaagtactgtgcaaccaaaa
tgcaaatcttgggaatatgacaatgaaaagggacattgttgtgacaaatgccatgcaggt
tttaagcttttagaggtgtgtcatggtgatggtcagagaagtaagtgcgtgccctgtcct
gatagacaatacacagaccagattaactactcccccaactgcagaagttgcagcacctgt
aaaaagaatgaaatcctgacaaagccatgtgggagaagtcagaacactatttgtcaatgt
aaagacggttattacaaagctttcatcgactcaggaacgtacgagtgtcgcaaatgtaca
aaatgtggacctgacgaaacaacaataaaaacctgcacaccagaacaaaacactgtttgt
gaatgtaaggagaactactacagagtcatgagaaaatgtgaaccctgcaagagttgtggc
cctcagtgcagtcagcactgtacaccttctgttcagaatacaaaagatcctgataccaca
gtaaatgaattccctgtaaacataattattggagttggagctgtggtgcttgtgttgttt
gtgctggcggttcttgtcacctacatggctacaaaatggtttaccaagcagacgttgcta
cagccatcctcccagccgtctgatgtttccccagactcttgcgagcaggtcctaatcagt
ggtgaggaacctttggacaacagcagtgtcaaagccattcccaaaatccctacgactgag
caggagccatccaatctgccagactgtgtcccccttgaaatcaatatctctgacctgatc
tacacagtactggatctagttcccgtgctgcaggtaaagcagctggtgcgtattcttggt
gtgagggatacagaaattgaacaagcagagttggacaacagatcctgccgggaggctcac
taccagatgctgcgggtgtgggctgagagagggtcacatgtgggcggaggagggcgacga
ggtggaatgcttcaccggccattgttgcaggagttgttagacaaactgagacagatgcac
ctgggacgggcggcagaggagcttgagacaaagtatggcattcagtag
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