Lates calcarifer (barramundi perch): 108887769
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Entry
108887769 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: sodium/potassium/calcium exchanger 1-like
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
108887769
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108887769
Transporters [BR:
lcf02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
108887769
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
PPP4R2
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
108887769
NCBI-ProteinID:
XP_018538816
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Position
LG2:11877672..11896015
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AA seq
792 aa
AA seq
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MNVHSPPRRRLRRSRVLFFISGVLLCFVYTLTLKARLSEPRASAQTGDVLRAEGGGDDVV
EVNIREVASNETEEEVVLPESSKPPLVIIVNRTDIEQCIYVDPQPPKPPPTTTPPPTTTT
VPPLKPPHRKGEYPEDLFSLEQRRQGWVVLHILGMTYMFVALAIVCDEFFVPALEVITNK
LEISDDVAGATFMAAGGSAPELFTSLIGVFVSHSNVGIGTIVGSAVFNILFVIGMCAIFS
REMLHLTWWPLFRDVTFYILDLIMLIIFFLDNMILWWESIMLVLGYICYVSFMKFNSQIE
QVVKTQLNKHMSIVKVWTAEEPEKESEAPPPAAAPAPPPPAPKAEDKSKPEPEPPPSSPK
RNKPPSDSQEDKAKLRVRPVLQRGGSSASLHNTSLRSTIFQLMIHTLDPLGEEAALRGAH
KTPAPRKARRETSFNGDVRGEGSVQRKAKNKVKPLNVPVTGKLQSKSQQHHAEDVDQKPK
SEQAAAAEPSTSQPPKTEETTETTEKTENIEKTEPTSDQPDQSKAAAAAAAGGSEGNAEG
KSSDEDSSDSGESEDNDDDDDDDDDDDDDDDDGNKEEEDKEEAEEENEPLSLEWPETRRK
QATYLFLLPIVFPLWLTLPDVRNLASRRYFVMTFIGSILWIGVFSYLMVWWAHQVGETMG
ISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPVPWLIYTL
LHNGKPVTVSSNGLFCAIVLLFLMLLFVIISIAACRWKMSRMLGLTMFVLYFVFLVLSVL
LEDRILICPVSI
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgcactcgcctccgaggaggagactcaggcgcagtcgtgtcctcttcttcatc
tcaggtgtgctgctgtgtttcgtctacactctgactctgaaagccaggctgtcagagcca
cgagcctctgcgcagacgggtgacgttctcagagcagaagggggtggtgatgatgtcgta
gaggtcaacattcgggaggtggcatccaatgagacagaggaggaggttgtcttacctgag
agcagcaaaccccctctggtgataatcgtcaacaggacagatatcgaacagtgtatctat
gtagatcctcaacccccaaaaccacctccaactacaactccaccgccaaccaccaccaca
gttcccccgctcaagcctcctcacaggaagggtgagtacccagaggacctcttctcactg
gagcagcggcgacaaggttgggtagtcctgcacatcctgggcatgacctacatgtttgtc
gccctggccattgtctgtgatgagttctttgttcctgcgctggaagtcatcaccaacaag
ctggagatttctgacgacgttgccggggccaccttcatggcggctggaggctctgccccc
gagctcttcacctccctgattggcgtcttcgtctctcacagcaatgtgggcattggcacc
atcgtgggctcagctgtcttcaacatcctgtttgtgattggcatgtgtgccattttctcc
cgggagatgctgcacctcacctggtggcccctgttccgagacgtgaccttctacatcctg
gaccttatcatgctcatcatcttcttcctggacaacatgatcctgtggtgggagagcatc
atgctggtgctgggctacatctgctacgtgagcttcatgaagttcaacagtcagatcgag
caggtggtcaagacccagcttaacaagcacatgagcatcgtcaaggtgtggactgcagag
gagccagagaaggagagtgaagcccctcctcctgctgctgctcctgctccaccacctcct
gcaccaaaagctgaagataaatccaaaccagaacctgaaccgcctccgagcagccctaag
cgcaacaaaccaccgtcagattcacaggaggacaaagcaaaactcagggtgcgtccggtc
ctgcagcgaggcggcagctcggcctccctccacaacacgtcgctgcggagcaccatcttc
cagctgatgatccacacattggaccctctgggagaagaggcagcccttagaggggcccat
aaaacccctgccccaaggaaagccagacgagagacatcctttaatggtgatgtcagaggg
gaggggtcagtgcagaggaaagcgaagaacaaagtaaagcctctgaatgtcccggtcacg
ggcaaattacagagcaagtcacagcaacaccacgctgaagatgtcgatcaaaagccaaag
tctgagcaggctgctgcagccgagccgtccacctcacagcctccaaagacagaagagacg
accgagacgacagagaagactgagaacattgagaagaccgagccaacgtccgaccagcca
gaccagtcaaaggcggcggcagcagcagcagcagggggatcagagggcaacgcagagggc
aagagcagcgacgaggacagcagcgactccggtgagagtgaagacaatgacgacgacgat
gatgatgatgatgatgatgatgatgatgatgatgatggaaataaggaggaagaggataag
gaggaagcagaggaggagaatgagccgttatctttagagtggcctgaaaccaggcgtaag
caggccacctatctgttcctgctgcccattgtgttcccactgtggctcacgctgcctgac
gtccgcaacctggcgtccaggagatattttgtcatgacatttatcggctccattctgtgg
attggagttttctcctacttgatggtgtggtgggctcatcaggtgggtgagaccatgggc
atctcagaggaaatcatgggcctgaccatcttggctgccgggacgtccatccctgacctg
atcaccagtgtgattgtggcccggaaaggtctgggcgacatggccgtgtccagctcagtg
ggcagcaacatctttgacattactgtaggtctgccggtcccatggctcatatacactcta
ctccacaacggcaagcccgtcactgtcagctccaatggcctgttctgcgccatcgtgctg
ctcttcctcatgctcctcttcgtcatcatctccatcgctgcatgtcgctggaagatgagt
cgaatgttgggcctcaccatgttcgtactgtactttgttttcctcgtcctcagcgtcctg
ctggaggatcgcatcctcatctgcccagtttcaatctga
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