Lates calcarifer (barramundi perch): 108888087
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Entry
108888087 CDS
T04895
Name
(RefSeq) ATPase family AAA domain-containing protein 2 isoform X1
KO
K22531
ATPase family AAA domain-containing protein 2 [EC:3.6.1.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
108888087
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA
Bromodomain
AAA_lid_3
AAA_2
AAA_22
AAA_16
AAA_5
nSTAND3
RNA_helicase
IstB_IS21
AAA_7
RuvB_N
ResIII
Mg_chelatase
AAA_25
AAA_18
Motif
Other DBs
NCBI-GeneID:
108888087
NCBI-ProteinID:
XP_018539421
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Position
LG15:27631329..27646795
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AA seq
1526 aa
AA seq
DB search
MVILRSSSSVGAEPVASTPKRRSMELDSSSEFLSLLPASQRKSARVTRSSRALDDSFSSP
ENNTANGHADMQQDEGSGFHDSLRTRGQRVKLEVSFADMEPKTSLAVNEDKAGGCCTRKS
SRLQREGKTTSGKQQADVPDEVEGSSTPKRSRFNLQSREVEEEEEEEDRSVRRSSRITRY
KLDSRNQSVLYDRLITNTAEAVLQKMDDMQKMRRRLRSRDRDTKEELGVYTRGRMRRSLR
TNVESKDTEEENQGGDEDDHDEEEEEEEEDGEDDDDDEEEEDDEDGEDEEEENQRRYDFR
QRKTVVRYQAPQDEPREPRKRSMYFKDHSSPTRRRFRFSSTAPRSPYNRRRTSRSSSERR
RHAIHSSDSTSSSSDDEKFQRRRSKNRSRSVNRCLPMNLVKEDLLGIHKDRMKIGASLAD
VDPMHIDRTVCFDSIGGLNRHISALKEMVVFPLLYPEVFERFKIQPPRGCLFYGPPGTGK
TLVARALANECSQGERKVSFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEI
DGLAPVRSSRQDQIHSSIVSTLLALMDGLDGRGEIVVIGATNRLDSIDPALRRPGRFDRE
FLFGLPDREARKDILKIHTRQWTPTPSDTFLEELADKCVGYCGADIKAVCSEAALCALRR
RYPQIYSSSQKLVLDVNSIAITNKDFISAMSKMVPAAQRAVVSPAKALIPAIRPLLSTAL
QNILHTVSRVFPHAELGLKRKREQDVTCGISEDDLIFSEDEDLEGCSNGQPPHSQLKTPA
AKGLLNLNRSVLSQPTSYRPRLLLEGRPGSGQSSYLAPAVLHALEKFTVYTLDMAILFGA
SATAPEETCAQIFVEAKRTSPSILYIPHIGQWWETVGPALRATFLSLLSSIPAFSPILLL
ATCNLQYDQLSTEVQELFRVEYGEVFHVQVPTSRERRNFFEDLILNQAAKAPASKKKAVL
HALEVLPVAPPPPPRQLTEEETQKLEEQEEDTLRELRLFLRDVTNRLSQDKRFKAFTKPV
DLEEVPDYAEVIKKPMDLSTVLSKIDLHQYGTVKEFLQDVDLIWQNALEYNPDRDPSDRQ
IRHRACALKDTVHAIIRDELDEDFEKICEEIKASCRTRGCSTARFAPSFYHVLPKQPKPP
AEAKITDITPQRDPAGATAAVTPNTSASTVTTPKNTAQRKKRRKSRWSTGLYAKKRSSSS
PHVSRDDTLLGSDEDEEDGDDEEEAEKEAGAERDEGTGGEEDQMVVDVESGPAEAQEGSV
GPNAKEQDSHEKGIEERSQAMEDKVILCEIEKNENDNHTGNEKEKVDKAVTDEPGQSEEN
NKAMTGGRDENSEVISANTNKDSNTETEGNTQGQSSTAESGKTNDQKLTQTEMEKCQTVR
QADDRNNKLATAEEAELNSHAEPMEVEATETSTTDTSSAIRGEEDPNTERSARRMTRALK
NAVLQQQMISVDKALQILDQEIPPLVVDRDKLKELLEKVVTKTDGYEVYKLEKLYALLCQ
SIYRHRRDYNKTALIQELEQEIEDFC
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atggtgatactacgcagcagcagcagtgtcggggctgagccggtggcaagtactccgaag
aggaggtcgatggagttggattcaagctccgagtttctgtcgttgcttcccgcgtcgcag
agaaagtccgctcgggtgacccggtcctcccgggctctggacgacagcttcagcagcccc
gaaaacaacacggcgaatggacatgctgatatgcagcaggatgagggaagtggtttccat
gactctctgaggactagaggacagagagttaaactagaagtctcctttgctgacatggag
ccaaagaccagcttggctgttaatgaagacaaggctggaggctgctgtaccaggaaatcc
tccaggttgcagagagaggggaaaacaactagtgggaagcagcaagcagatgttccagat
gaagtggaggggtcgtccactccaaagaggagccgcttcaacctacagagccgagaagtg
gaggaggaagaggaggaggaggatcgctctgtgcgacgtagctcccgaattaccagatat
aaactggattcccgcaaccagtcagtgctctacgaccgcctcatcaccaacactgctgaa
gctgtcctccagaagatggatgacatgcagaaaatgagacgcagactgaggagcagagat
agagacactaaagaagagctgggtgtttataccaggggccgaatgcgaaggtctctgagg
acgaatgtggagagtaaagacactgaggaggagaaccaaggaggggatgaggatgatcac
gatgaggaggaggaggaagaggaagaggacggagaagacgacgatgacgatgaggaggaa
gaggatgatgaggatggcgaggatgaggaagaagaaaaccagaggcgctatgacttcaga
cagcgaaagactgtggttcgctaccaggctccacaggacgagcccagagagcccaggaag
cgcagcatgtacttcaaagaccactcatctcccaccagacgcaggttcagattcagctcc
acggcccccaggagcccctacaacaggagaagaaccagccggagtagttctgagagaagg
agacatgccatccacagtagcgactccacttcctcatcttcagatgatgagaaattccag
agacggaggagtaagaacaggagccggtcagtcaacagatgtctaccaatgaaccttgtg
aaggaagacctgctgggaatccacaaggacaggatgaagataggagccagcctcgctgat
gtggaccccatgcacatagacaggacggtgtgctttgacagcatcggaggtttgaataga
cacatctcagcgctgaaggagatggttgtcttccctctcctctacccagaagtctttgaa
agattcaagatacagccacccaggggctgtctattttatggtcccccaggcacagggaaa
acccttgtagccagagcgctggccaacgaatgcagtcagggggaaagaaaggtgtcattc
ttcatgagaaaaggagctgactgcctcagtaagtgggtgggagaatctgagagacagctc
cgcctgttgtttgaccaggcataccaaatgcgtccatccatcatcttctttgatgagatt
gatggtttggctccagttaggtcgagccgtcaggaccagatccacagttccattgtgtca
accctcctggctcttatggatggattagatggtagaggagagattgttgtgataggagcc
acaaacagactggactccattgacccagctctgagaagaccaggacgctttgacagggag
ttcctcttcggcctgcctgacagagaggctagaaaggacattctgaagatccacaccaga
cagtggacacctacaccctctgacacttttctggaggaattggctgataaatgtgttggt
tattgtggagcagacatcaaggcagtgtgttcagaggctgccctgtgtgcactgcgccgt
cgttacccacagatctactcctcatcacagaaacttgttcttgatgtcaactccattgcc
atcacaaacaaagactttatttctgccatgtccaagatggtgccagctgcccagagagcg
gtagtgtcaccagccaaggccctaatccctgccatccgtcctcttctgagcaccgccctg
cagaacattctccacacagtcagcagagtgttcccacatgctgagctgggcttaaagagg
aagagagaacaagatgtgacctgtggtatttctgaagatgacctgatattcagtgaggat
gaggacttggagggttgctccaatggacagcccccacactctcaactcaaaacacctgct
gctaagggactcctcaacctcaacaggagtgtgctgagccagccaacatcctatcgtccc
aggctgctattggagggcagaccaggctcgggtcagagctcctatctggctcctgctgtc
ctccatgctctggagaaattcactgtgtacaccctggacatggccatactgttcggagcc
agtgccactgcaccagaggaaacctgtgctcagatttttgttgaagccaagcgtacctct
cccagtatcttatatatacctcacatcggacagtggtgggaaacagtgggtcctgcctta
agagcgacctttctgagcctgcttagctccatccctgccttctctcctatactgctgctg
gccacctgcaacctgcaatatgaccaactcagtacagaggttcaggagttgtttcgggtg
gagtatggggaagttttccatgtccaggtccctaccagcagagaaagaagaaacttcttt
gaggacctgatccttaaccaagctgccaaagcccctgcctcaaaaaagaaagctgtgctc
catgcattagaggtgcttccagttgcccccccaccccctcctcgtcagctgacagaagaa
gagacccaaaaactggaggagcaggaagaagacaccctcagggagctccgcctcttcctg
cgtgatgtcaccaaccgtctgtcccaggataaacgcttcaaggctttcacaaagcctgtg
gatttagaggaggttccagattatgctgaggtgatcaagaagcccatggacctgtcaaca
gttctctctaagatagatctccatcagtatgggacagtaaaagagtttctccaagatgtg
gatctcatctggcagaatgcacttgaatacaacccagacagggacccctcagaccgtcag
atccgccacagagcatgtgcactaaaggacactgttcatgccatcattagagatgaactg
gatgaagattttgagaagatttgtgaggagattaaagcatcatgccgcacaagaggttgc
tccactgcccggtttgctccctccttttaccacgtccttcccaaacaacccaaacctcct
gctgaggccaagatcactgacataaccccacaaagagatccagctggggccacagctgcg
gttaccccgaatacaagtgcttctactgttacaacacctaaaaacacagcccagaggaag
aaaaggcggaaaagtcgctggtccactggcttgtatgcaaagaagaggtcttcctcctct
ccgcatgtgtccagagatgacacactgttagggtctgatgaggatgaggaagatggagat
gatgaggaggaagctgagaaggaagcaggagcagagcgtgatgaggggactggaggagag
gaggatcagatggtggttgatgtagaatcagggcctgcagaagctcaggaaggtagtgta
gggcccaatgcaaaggaacaggacagccacgagaagggaatagaggagaggagtcaagct
atggaagacaaggttatcctgtgtgaaatagaaaaaaatgaaaatgacaaccacacaggg
aatgaaaaagaaaaggtggacaaagctgttacagatgaaccaggacagtcagaagaaaac
aacaaagcgatgacaggaggacgagatgagaacagtgaagtcatttcagcgaacactaac
aaggacagcaacactgagactgagggaaatacccagggacaatccagcacagcagagagt
ggcaaaactaacgaccagaagctgacacagactgaaatggagaaatgtcaaactgtaaga
caggcagatgacaggaacaacaagctagccacagcagaggaggcagaactgaacagccat
gctgagccaatggaggtggaagcaactgaaacctcaaccacagatacctcctcagctatc
agaggagaggaagacccaaacacagagcggagtgcgaggcgaatgactcgggctctaaag
aatgctgtgctgcagcagcagatgatcagtgttgacaaagctctacagatcctggaccag
gaaattcctcctctggtggtggacagagacaaattaaaggagctgctggagaaagtagtg
accaagactgatggttacgaggtctacaagctggaaaaactctacgccctgctctgccag
agcatttataggcacagacgagactacaacaaaacagcactaatacaggagttggaacag
gagattgaagacttctgttga
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