Lates calcarifer (barramundi perch): 108888257
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Entry
108888257 CDS
T04895
Name
(RefSeq) zinc finger protein basonuclin-2 isoform X1
KO
K24146
zinc finger protein basonuclin
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108888257
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108888257
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_4
zf-C2H2_aberr
Motif
Other DBs
NCBI-GeneID:
108888257
NCBI-ProteinID:
XP_018539688
UniProt:
A0A4W6CH15
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Position
LG5:11614474..11774741
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AA seq
1343 aa
AA seq
DB search
MSKEAELDVRGSECDTVPPEPSKDPQLPRPPPAEANKPNGTAGVCTSIPSSSHSSSSSTT
TTTTTTSTSSSSSSRSGLGGISIVSSSSSSGAEGAGESSMQFSTRPPSAEQPGFMGTWQQ
QSTDSNLLYRMSQQGAVTRLPLKCDRSTMGRDLEEAIRCTLVNCTCECFQPGKIHLRTCD
QCKHGWVAHALDKLSTQHLYHPTQVEIVQSNVVFDISSLMLYGTQAVPVRLKILLDRLFS
VLKQEEVLHILHGLGWTLRDYVRGYILQDAAGKVLDRWTIMSREEEIITLQQFLRFGETK
SIVELMAIQEKEGQAVTVPSSKTDSGIRTFIESNNRTRSPGLLTHLENSSPSSIHHFENI
PNSLAFLLPFQYINPVSAPMLGLPPNGLPMEQSALRLREPSLPNQGEQVETSESEVSLSP
FRTGQSPSRGALGVINNIEPKTEPNNRASPISPTPSTQQAQQQQQQQTQLQQQQGQQQSQ
NQPQQSNSLSDHQVHHHFIKDEQSKTITHPSFSSKMHRMRRMGATSRKGRVCCNSCGKTF
YDKGTLKIHYNAVHLKIKHRCTIEGCNMVFSSLRSRNRHSANPNPRLHMPMLRNNRDKDL
IRANSTTGTPVISSTKNGGFTLTSPGRPPLGFTTPPVDPMLQSPLQSPLVFPSLKSVQPV
QPVPPFYRTLLSPADLVSPPVSLPTSPILPTTTNSTTLMDQQQQILAAAAVASHNNVHVS
EAGPMSHRLPTPTANQDLTSGSSDPTPKKKPRKSSMPVKIEKEVIDVADEYEDKDEDDDD
NIHQNHHHHQSSLLHNNIKMNGNCNSNNSGSGTGNHSGGSGQQSPSQDEMSPGLALRGMM
RQSEDECREGTGSDSRGGNDLRGSGELRCMDSFTSEDQDHERDFENESETSDSKMFYRDE
LMDVDEHQKHSRGGRGLDKEQDDEGGEEAHLRKEMEGKGHSSPSPHQPPIKIKEELNDPT
YDMFCMGQYGLYNGGMAAAAAAAASMAALHESFISSMGYGSSPPKFPSSQSPEGDPCSSP
DPKICYVCKKSFKSSYSMKLHYKNVHLKEMHVCTVAGCNAAFPSRRSRDRHSSNINLHRK
LLTKELDDIVLDPQLTPLPKDLRAELLAKIYAGHHMGLDPMAGMGIGGGSLGPTGLNHDA
RSPMSIEYPQHRLNHILKNHHTNGFSQGHPDDYMVLDLSTTSSVQSSSSVHSSHESDEGS
DEGILLDDLEEEEGEEDEEEGNSEGEDCSQRAGRRADGGHQDETGELRGEGHGERLESSS
SPFLLSSTGGSNGGSSGILCNICHKMYSNKGTLRVHYKTVHLREMHKCKIPGCNMVFSSV
RSRNRHSQNPNLHKNMPFSTIID
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagaggcagagttggatgtgagaggcagtgagtgcgacacagtcccaccagag
cccagcaaagacccacaactacccaggccacctccagctgaggcgaacaaacccaacggc
accgctggcgtttgcacgagcatcccctccagtagccacagtagcagcagcagcaccacc
accaccaccaccaccacctccacaagcagcagcagcagcagcagaagtggtctgggtggc
attagcatcgttagcagcagcagcagcagcggcgctgagggagcaggcgaaagctccatg
cagttcagcaccagaccgcctagtgctgagcagccgggcttcatggggacatggcagcag
cagagcactgacagcaacctcctctacagaatgtcccagcagggtgctgtaacccggctt
cctttgaagtgcgacaggtcgactatgggccgagacctggaggaggccattcgctgcaca
ttggtgaactgcacatgtgagtgtttccagccggggaagattcacttacgaacatgtgac
cagtgcaaacatggctgggtagctcacgctctggacaagctcagcacccagcacctctac
cacccaacccaggtggagatcgttcagtccaacgtggtgtttgacatcagcagcctgatg
ctatacggcacccaggccgtgcccgtcaggctcaagatcctcctcgaccgcctcttctcc
gtgctcaagcaggaagaggtgctgcacatcctgcacggcctgggctggaccctccgagac
tacgtcaggggctacatcctgcaggatgctgcaggcaaggtgctggaccgctggaccatc
atgtcccgagaagaggagatcatcaccctgcagcaatttctgcgctttggtgagaccaag
tctattgtggagctgatggccattcaggagaaggaaggtcaggcagtaacagttccctcc
tcgaagacagactccggtattaggacattcattgaaagcaacaacaggacccgcagcccc
ggactcctgacacatctggaaaacagtagcccatcaagcattcaccatttcgagaatatc
cccaacagcttagccttcctcctgcctttccagtatatcaacccagtctctgcccccatg
ctcggcttgccccctaatggcctgcctatggagcagtctgccctccggctcagggagccc
agcctgccaaaccaaggtgaacaggtagagaccagtgagtcagaagtgtccctgtcaccc
ttccgcacaggccagagccctagccgtggagccctgggagtcattaacaacattgaaccc
aagacagaacccaacaacagggcatcacccatctcgccaaccccttccacccagcaagct
caacagcagcagcaacagcagacacagctccagcagcaacagggccaacagcaatcccaa
aatcaaccacagcaatccaacagcctgagtgaccaccaagttcaccaccacttcataaag
gatgagcagtctaaaaccatcacccatccttccttttcctccaagatgcatcgcatgcgc
cgcatgggagccacttcacgcaagggtcgagtgtgctgcaactcttgtggcaaaaccttt
tatgacaaaggcacacttaagatacactataatgctgttcacttgaagattaaacatcgt
tgcaccatcgagggctgcaatatggtcttcagctcactgcgcagccgcaaccgtcacagt
gccaatcccaatccacggttgcacatgcctatgctgcgtaataaccgcgacaaagacctt
atccgtgccaattcgaccactggcacgcctgtcatctcaagcaccaagaatggtggcttc
acactcaccagccctggaaggccaccactgggcttcaccactccaccggtagaccctatg
ctccagtcacccctgcagagtccactggtgttcccctccctgaagtcagtgcagccagtc
cagccagtgcccccattctaccgtacgctcctgtcccccgctgatctcgtcagtcctcca
gtgtcactgcccaccagccccatcctgcccaccaccactaacagtaccaccctgatggac
cagcaacagcagatcttggctgctgcagctgtggcttcacataataatgttcatgtgtca
gaggcagggcccatgtctcaccgtttacctacacctactgccaatcaggacctcaccagt
ggcagcagtgatcccacacccaaaaagaagcctcgtaaatctagcatgccagtgaagatt
gagaaggaagtgattgatgtggcagacgaatatgaggacaaagatgaagatgatgatgat
aacatccatcaaaatcaccaccatcaccagtcatcccttcttcacaacaatatcaaaatg
aatggtaactgtaacagcaacaacagtggcagtggtactgggaaccacagtggtggtagt
gggcagcaatccccatctcaggatgagatgagccctggcttagctctgagaggcatgatg
agacagagtgaagacgaatgccgggaagggactggtagtgacagtaggggtggaaatgat
ctgcgaggctctggtgagctacgctgcatggacagcttcacctctgaggaccaggaccat
gaaagagacttcgagaatgagtctgagacctctgattccaagatgttctaccgtgatgag
ctcatggatgtggatgaacatcaaaaacacagcaggggtggaaggggtctggacaaggaa
caggatgatgagggtggtgaggaagcccatttgagaaaggaaatggaaggaaagggccat
tcctcaccctcccctcatcagccccctatcaagatcaaggaagaactcaacgatcctact
tatgacatgttttgcatgggccagtatggcctctataatggaggcatggcagcagctgct
gccgctgctgcaagtatggctgccctgcatgagagcttcatctcttcgatgggctacggt
tctagcccacccaaattcccttcttctcaatcaccagagggagatccatgctcaagtcct
gaccccaagatctgctatgtgtgtaagaagagcttcaagagctcctatagcatgaaactg
cactacaagaatgtgcacctcaaagagatgcatgtgtgcactgtggctggctgcaatgct
gcattcccttcacggcggagccgagacaggcacagctccaacatcaacctgcaccgcaaa
ctgctgaccaaagagctggacgacattgtcctggacccccaactcacgccactgcccaag
gacctgcgagccgagttactggccaagatctacgccgggcaccacatgggcttggaccct
atggcagggatgggcatcggaggcggcagcctcggacccaccggcctgaaccacgatgcc
cgttcccccatgagcattgagtatccccagcaccgtctcaaccacatccttaaaaatcac
cacaccaatggcttctcccagggccacccagatgactacatggtgctggacctgagcacc
acatctagtgttcaatccagcagcagtgtccactcctcacacgagtcagacgagggcagt
gacgagggcatcctattggatgacctggaggaggaggagggagaagaggatgaggaggag
ggcaacagtgagggggaggactgctcccagcgtgctgggaggcgagctgacggtgggcat
caggatgagactggagaactcagaggagaaggacatggtgagaggttggagtcttcctcc
tcaccattcctcctttcgtccaccgggggcagtaatggtggcagcagtggcatcctctgc
aacatctgccacaaaatgtacagcaacaaagggactctgcgcgtgcactacaagactgtg
cacctgcgagagatgcacaagtgcaaaatccccggttgcaacatggtgttcagctcggtg
cgcagccgtaaccgacactctcagaaccccaacctccataaaaacatgcccttctctaca
ataatagactaa
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