Lates calcarifer (barramundi perch): 108889004
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Entry
108889004 CDS
T04895
Name
(RefSeq) calpain small subunit 1b
KO
K08583
calpain, small subunit 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108889004
Peptidases and inhibitors [BR:
lcf01002
]
Cysteine peptidases
Family C2: calpain family
108889004
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GFIT
Motif
Pfam:
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
EF-hand_5
Gag_FV_central
EF-hand_13
Motif
Other DBs
NCBI-GeneID:
108889004
NCBI-ProteinID:
XP_018540786
UniProt:
A0A4W6D3V1
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Position
LG21:1545783..1551486
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AA seq
216 aa
AA seq
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MFLAKNLIGGIIKVVSNIDPSDFMPSDPPPPRRPLHFAEAHENDEEKQFRRVFQQLAGDD
MEVSPNELMNILNKVVSKHGGLSTDGFSIESCRSMVAVMDSDSTGKLGFHEFKYLWNNIK
RWQGIYLSHDADRSGVISADELPRAFKAAGFPLNDQLYKLIIRRYSDEHGNMDFDNFIGC
LVRLDAMCRAFKTLDKDNSGTIDLDIKEWLQLTMYS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgtttctggcgaagaatttaatcggtggcatcatcaaagttgtgagcaacatcgacccc
agcgactttatgccctcagaccctcctcctcctcgcagacctctacacttcgccgaggct
catgagaacgatgaggagaaacagtttcggagagttttccagcagctggccggagacgac
atggaggtgagccccaacgagctgatgaacatcctcaacaaagtcgtttccaaacacgga
ggcctgagtactgacggcttcagcatcgagtcctgcaggagcatggtcgctgtcatggac
agtgacagcacagggaaactgggattccatgagttcaaatacctgtggaacaacatcaag
agatggcagggcatttatttatcccacgacgccgaccgttcaggtgtgatcagcgctgac
gagctgccgagagccttcaaggctgcaggtttccctctgaatgatcagctgtacaagctg
attatccgtcgctatagcgacgagcacggcaacatggactttgacaatttcatcggctgc
ctggttcgactggacgccatgtgcagagccttcaagaccctggataaggacaacagtggc
accatcgacctggacatcaaggagtggcttcagctgacgatgtattcatga
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