Lates calcarifer (barramundi perch): 108889024
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Entry
108889024 CDS
T04895
Symbol
tjp2a
Name
(RefSeq) tight junction protein ZO-2a isoform X1
KO
K06098
tight junction protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108889024 (tjp2a)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
Guanylate_kin
PDZ_2
SH3_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
108889024
NCBI-ProteinID:
XP_018540815
UniProt:
A0A4W6FHC6
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Position
LG9:3050863..3079082
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AA seq
1248 aa
AA seq
DB search
MKTVLSLHRKWAHAVKTIRILQGLNPVMEETVWEQYTVTLQRDPKMGFGIAVSGGRDNPN
EESGETSIVVSDVLQGGPADGLLFEKDRVVQVNAISMEGAIHSFAVQTLRKCGKVAKITV
KRPRKVPVNLLNRPPSPDDRVFNNDYNEDYNYDQDRRSVYSGRSGGGRDHSLERERGGGY
MDSGYHTHERDYDRDYDRRERGRSMERDLSPDRQYRRDGSRGRTLDRERSPDRRYRSDHV
LDRDYSPDRRYRSERALDRDHSPDRRYRSERALDREYSPDRRYRSERTLDRTNSPDLRYK
QDSHSPGRGHGRDHSFERGRERISSEPRKYDEPIRRSGSRDRLDRSPSPAAMPIPLPRPI
RDLEPLEKPLNVLLLKNRPNEEYGLRLGSQLFIKEMTSTGLASRDGNLQEGDIILKINGT
VTENLSLSDAGKLIEKSRGKLQLVVQRDKRQVLIRVPPMVDSDSELDDISEIESYRSYSP
QDDRRGQPSDLSSHSSNERLREKPREEPPNRLAKMGAMPTPFRGADRAVEDTPPLQAERE
EARPETPPVPAVTVAPKVHAPPKVPVKPSMEDQEVYGPNTVMVRFQKGDSVGLRLAGGND
VGIFIAGVQEDSAAEQEGLRTGDQIMKVNNMDFRGMVREDAVLYLLEIPKGEDVTILAQS
KPEVYKDILASGRGDSFFIRTHFEYEKEAPQSLPFSRGEIFKVTDTLYDGKLGNWLAIRT
DKDNQLLEKGIIPNKSRAEQMANVQNAARAASGNDRGDFWRLRGQRAAKKKDLRKSREDL
SAAPVTTRFPAYERVVLREAGFKRPVVIFGPISDAVNDKLAADMPNDFVIAKTEPKDAGS
EKSSGVVRLNTIRQIIEQDRHALLDVTPKAVDTLNYTQWYPIVIFLNPDSKQGVKTMRNR
LVPGSSRSARKLYEQAVKLRKTCSHLFTATIDLNSANDAWYGSVKESIQEQQDRAVWVCE
GKLDGSEEDLDLHDDRMSYLSAMSADYLSMDSRLTSDYEDTADEGGAYTDNELDETLDDS
QPVSAISRSSEPVLPDEKLHPEPRARMRRSGSREVLNREPSPPPSFVPEPPKVRAQTRTD
STRSYDSHSSSTISSDAAGGNKPLPPPVALKPTVPRLNQHTEEQSPGKEEEDPANKSFLG
KIQAFEKMDHLARAQRLLELQEAENARLEIAQKHPDIYAIPVKLPKPNLNRPQPIGSSSN
PEPQTPSRTPYAETRGYDDDDEAEYRRQLADQTKRGYYNPQKYKDTEL
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgtcctcagcctgcacaggaaatgggcccatgcggtcaagaccattcgcatc
ctgcagggactcaacccggtcatggaggagaccgtgtgggagcagtacaccgtgaccctg
cagagggatccaaagatgggctttggcatcgcagtgtcaggggggcgggacaacccgaac
gaggaaagcggcgagacgtccatcgtggtgtccgacgtcctgcagggaggacctgccgat
ggcttgttatttgagaaagaccgggtggtgcaggtgaacgccatctccatggagggggcc
atacactccttcgccgtccagactctcagaaaatgtggcaaagttgcaaaaattacagtg
aagaggccaaggaaggttccggtcaacctgctgaaccgccccccgtcacccgacgacaga
gtcttcaacaacgactacaacgaagattacaactacgaccaggaccgccgcagcgtgtac
agcgggcggagtggtggcgggcgtgaccacagcctggagagggagcgaggcggcggctac
atggattctggctaccacacgcacgagcgcgactatgacagggactatgaccggcgggag
cgtggcaggagcatggagagggacctcagcccggaccggcagtacaggagagacggcagc
aggggtcgcactttggatagagagcgcagcccggatcgccgctaccggagcgaccacgtg
ctggaccgcgactacagcccggacaggaggtaccgcagcgagcgcgcgttggaccgagac
cacagcccggatcggcgctaccgcagcgaacgagccctggatcgggagtacagcccggac
aggcgctaccgcagcgagcgaaccctggaccgcaccaacagccccgacctgcgctacaag
caagacagccacagcccgggacgaggccacgggcgcgaccacagcttcgaacgagggcgg
gaacgcatctccagtgaaccgaggaagtacgatgagccgataaggcgaagcgggagcagg
gatcgcttggaccgctcgccatcacccgccgccatgcccatccctctgccacgcccgatc
cgggacctggagccgctggagaaaccgctgaatgtgctgctgctgaagaaccgacccaac
gaagagtacggccttcgtctgggcagccaactcttcatcaaggagatgaccagcactgga
ctcgccagcagagacgggaacctgcaggagggagacattatactgaagattaacggcacc
gtgacggaaaacctgtccctgagcgacgccgggaagctgatcgagaagtctcgcgggaag
ctgcagctggtggtgcagagggacaaacggcaggtgctgatccgagtccccccgatggtc
gacagtgactcggagctcgatgatatctcagagatcgagtcctaccgctcctactcgccc
caggacgacaggcggggccaaccctctgacctgtcctcacactcgtccaatgagaggctc
agagagaagcccagagaggaaccgcccaacaggctggcaaaaatgggcgccatgccaaca
ccgttcagaggtgccgacagagccgtagaggacacgccccctttgcaggccgagagggag
gaagcacgaccagaaacgccaccagtgccagcagtcactgtagccccgaaggttcatgct
cctcccaaggtgccagtaaagccgagcatggaggaccaggaagtctatggaccgaacacg
gtgatggtgcgtttccagaagggcgacagcgtgggcctaaggctggcgggaggaaacgac
gtcggcatcttcatcgccggcgttcaggaggacagcgccgctgagcaggagggactccgc
acgggggatcagatcatgaaggtgaacaacatggacttcagaggcatggtgcgagaggat
gctgtcctctacctcctggagattcccaagggagaggatgtgaccattcttgctcagagt
aaacctgaagtgtacaaggacattttagcgtctggcagaggcgactctttcttcatcagg
acccactttgagtatgagaaggaggctccacagagtcttcccttctccagaggggagatc
ttcaaagtgacggacacgctttacgatggcaagctgggcaactggctggcaatccgcacc
gacaaagacaaccagctgctggagaaaggaatcatccccaacaagagcagagctgagcaa
atggccaacgtccagaacgctgcccgggccgcatcaggcaacgacagaggagacttctgg
aggctgagaggtcagagggcggccaagaagaaggatctccgcaagagccgagaggacctg
agcgctgctccggtcaccacacgattccctgcctacgagagagtggttttacgtgaagct
ggattcaagaggcctgtggtgatatttggtcccatttctgatgcagtaaatgacaaactg
gccgctgacatgccgaacgacttcgtcattgccaaaacggagcctaaggatgcaggaagt
gagaaatcctccggggtggtgaggctcaacaccatccgacaaatcattgaacaggaccgc
catgctcttctggacgtgactcccaaagctgtagacactctgaactacacccagtggtat
cccattgtcatcttcctgaaccccgacagcaagcaaggtgtcaagaccatgaggaaccgc
ctcgtacccgggtccagccgcagtgcacgcaaactgtacgagcaggccgtcaagctcagg
aagacctgctcacacctgttcaccgcaaccatcgacctgaactcggccaacgacgcgtgg
tatggcagcgtgaaagagtctatccaggaacagcaggacagagctgtgtgggtgtgtgag
ggcaagctggacggttcagaggaggacctggatctccacgacgaccgcatgtcctacctg
tcggcgatgagcgccgactacctgagcatggacagccgtctgaccagcgactacgaagac
acggccgacgagggcggggcttacaccgacaacgagctggacgagacgctggacgattcc
cagcccgtgtcggccatcagtcgatcatcggagcccgtgctgccagacgagaagcttcac
cctgaaccccgggctcgtatgaggaggtcagggagcagagaggtgctgaacagagagccc
agccctcccccttcgtttgtccctgaacccccgaaggtgcgggctcagactcggactgac
tcaacgcggagctatgactcacactccagcagcaccatcagcagcgacgcagcgggcgga
aacaagccgctgccccctcccgtcgccctgaagcccaccgtcccccgtctgaaccagcac
acagaggagcagagcccggggaaggaggaggaggatcccgccaacaaatccttcctgggc
aagattcaagcgtttgagaagatggaccacctggctcgagctcagagactcctggagctg
caggaggcagaaaacgctcggctggaaatcgcccagaagcatccagacatctacgccatc
ccagtgaagctgccaaaacccaacctcaaccgtcctcagccaataggttcgagctccaac
cccgagccccagacgccgtccaggacgccgtacgcagagacgagaggatacgatgacgac
gacgaggccgagtaccgcagacagctggccgaccagaccaagagagggtactacaacccg
cagaaatacaaggacactgagctgtag
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