Lates calcarifer (barramundi perch): 108889534
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Entry
108889534 CDS
T04895
Symbol
fmodb
Name
(RefSeq) fibromodulin
KO
K08121
fibromodulin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108889534 (fmodb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lcf00535
]
108889534 (fmodb)
Proteoglycans [BR:
lcf00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
108889534 (fmodb)
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
108889534
NCBI-ProteinID:
XP_018541563
UniProt:
A0A4W6EPM0
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Position
LG6:17592288..17596811
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AA seq
346 aa
AA seq
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MRTVVLLLIMGIVDLSIGQRYSQFHWLSHLRARRQHAGWQAEDVDCPLECDCPSTFPTAM
YCHSRNLQHVPYVPSHIKYVYLQRNQITGIQDGVFNNATNLVWVVLFHNQLNSDKIGKNV
FSKLKNLDRLLLDHNELTRVPPNLPKSITDLRLGHNKISKILPNSFEGMADLTTLQLQAN
LIEDIGGVFKGLKSLTMLDMRKNKLRKIPDNLPERLHQLYLEFNNIESVPAGFLTMYPKL
QFFRLAHNKLTDKGLPSGVFNISTLVELDLSFNKLEKIPVVSRNLENLYLQANKIKEFSL
SSFCSTIDMTNFSKLRMLRLDANEISARDIPAEAAYCLRRVAFIDV
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcggacagtggtgctcctcctcataatgggaatagtggatctgagcatcggccagcgt
tacagtcagtttcactggctgtcccacctgcgtgctcggcggcaacatgcaggctggcag
gccgaggatgtggactgccccctggagtgcgactgcccctcaaccttccccacagctatg
tattgtcacagccgcaatcttcagcatgttccctacgtcccctcacatataaagtatgtc
tacctgcagcgtaaccagatcacaggcatccaggatggggtgtttaacaacgctactaac
ttagtctgggttgtgctgtttcacaaccagctcaactcagacaagatcggcaagaacgtc
ttcagcaagctcaagaacctggaccggctgttgttggatcacaatgaacttacccgtgtg
cctcccaatttgcccaagtctatcacagacctgcgacttggtcacaacaagatctcaaaa
attctccccaactcattcgaggggatggctgacctcactacccttcaactccaagctaat
ctcatagaggacattggaggtgtgttcaagggactgaagtctctgaccatgctggatatg
aggaaaaacaagctgaggaaaatccctgacaacctccctgagaggctgcaccagctctac
ctggagtttaataacatagagagtgtgccggctggctttctcaccatgtaccccaagctg
cagtttttccgattggctcataacaagctgacagataaaggacttccatctggtgtcttc
aatattagcacactggttgaacttgacctgtccttcaataaactggagaagatccccgtt
gtcagtaggaacctggagaacctttatttacaagccaataagatcaaagagttctccctg
agcagcttctgcagcacaatcgacatgacaaacttctctaagctgagaatgctgcgtctg
gatgccaatgagatcagtgccagagacattcctgctgaagctgcctactgtttgcggcgc
gttgcctttattgatgtgtag
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