Lates calcarifer (barramundi perch): 108889570
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Entry
108889570 CDS
T04895
Name
(RefSeq) angiopoietin-1 isoform X1
KO
K05465
angiopoietin 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108889570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108889570
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Growth factors (RTK binding)
108889570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
HMG_CoA_synt_C
zf-Tim10_DDP
Motif
Other DBs
NCBI-GeneID:
108889570
NCBI-ProteinID:
XP_018541609
UniProt:
A0A4W6DS25
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Position
LG3:complement(16418753..16468913)
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AA seq
541 aa
AA seq
DB search
MMLWYNFGHHLLSLAALLVIVNCGGGEQRRGTDSSTSSTGGSGSSSSSSSGSGGSGSSSG
SSNYSNRRFHKIQHGQCTYTFILPEGDGAGGGSCREAKAGSPQYNANSLQRDAPPPEPDF
PSQKIQQLEHIMENYTQWLQKIENSIKESMKMEMAQLQQSAVHNHTAAMLEMGTNLLSQT
AEQTRKLTDVETQVLNQTSRLEIQLLENSLSTNKLEKQLMVQTNEISKLHDKNSLLEQKM
SEMEMRHREELETLKQEKGSLQTLVGRQSGVIRELEAQLSRATGNSTALQRQQQEMMDTV
HNLLNLCSKDGVVPNSTKVADEEKKFRDCADLYQAGFHKNAIYNIQINSQETKKVYCNME
TAGGGWTVIQRREDGSVDFQRTWKEYKMGFGSVSAEHWLGNEYVYQLTSQRQYALRVELT
DWDGHQAFSLYDRFQIGSEKQNYRLFLKSHSGTAGRQSSLVIHGADFSTKDMDNDNCLCK
CALMLTGGWWFDACGPSNLNGMYFTQGQHIGKLNGIKWHYFKGPSYSLQATAMMIRPLDF
S
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtggtacaactttggccaccacttgctctcactggcagcacttctggtgatt
gtgaactgcggaggaggggagcagaggagagggacggatagcagcaccagcagcacaggt
ggcagcggcagcagcagtagcagcagcagtggtagtggaggaagcggcagcagtagtggt
agtagtaattacagcaacagacgttttcataagatccagcatggccagtgcacgtacaca
ttcatcctacctgagggagatggagccggaggagggtcctgcagggaagcgaaagccggc
agcccgcagtacaacgccaactccctccagagggacgctccaccacctgagccagacttt
cccagccagaagatccagcagctcgagcacatcatggagaattatacccagtggctacag
aagattgaaaacagcattaaagagagcatgaagatggagatggctcaattgcagcagagt
gctgtccacaaccacacagcagccatgttggaaatgggcaccaacctcctctctcagacg
gctgaacagacacgcaagctaactgacgttgagacacaggttcttaatcaaacatcgagg
ctcgagatccagctgctggaaaactctctctccacgaacaagttggagaaacagttaatg
gtccagaccaatgagatcagcaaactgcatgacaagaacagcctcctggagcagaagatg
tcagagatggagatgcgacaccgcgaagagctggagacgctgaagcaggagaagggaagc
ctccagaccctggtggggaggcagagtggggttatcagggagctagaagcccagctgagc
cgagccacaggaaacagcacagccctgcagagacagcagcaggagatgatggatactgtc
cacaatctgctcaacctctgctctaaagatggagttgttcctaacagtacaaaagttgct
gatgaagagaagaaattccgtgactgtgccgacctctaccaggctggcttccataagaac
gccatctacaacatccagatcaattcccaggagaccaaaaaggtgtattgcaacatggaa
acagcaggtggtggatggacggtaatccagcgcagagaggacggcagcgtggacttccag
aggacgtggaaggagtacaagatgggttttgggagcgtgtccgcagagcactggctgggg
aacgaatacgtttaccagttgaccagccagagacagtacgctctccgtgtggagctgaca
gactgggacggacaccaggccttctcactgtatgaccgcttccaaatcggcagtgagaaa
caaaactacaggctgttcctgaaaagccacagtgggactgcaggcaggcagagcagtcta
gtaatccacggggcagacttcagcaccaaggacatggacaatgacaactgcctgtgcaag
tgcgccctcatgctcactgggggttggtggtttgatgcctgtggcccgtccaaccttaac
ggcatgtacttcacccaaggacaacacatagggaagttgaacggtatcaagtggcactac
ttcaagggcccgagctactcgctacaagccacggccatgatgatccgcccactggacttc
tcctag
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