Lates calcarifer (barramundi perch): 108889627
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Entry
108889627 CDS
T04895
Name
(RefSeq) nuclear receptor subfamily 4 group A member 3 isoform X1
KO
K08559
nuclear receptor subfamily 4 group A member 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108889627
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lcf03310
]
108889627
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
108889627
Nuclear receptors [BR:
lcf03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
108889627
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108889627
NCBI-ProteinID:
XP_018541713
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All DBs
Position
LG15:complement(12686750..12708828)
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AA seq
682 aa
AA seq
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MNPEQANTVVIRGKKSDGLDALTQTAFIKVITFVDTGSEERAQRSSEPRRSDTSSATPAE
SSPLQEPCPGRSHATPQSRTPSTIQREALSPDMPCVQAQYGPAPPGSAYSGQSFSYQGDS
YSSDLMTPDYTKLDLGGGEISAAAATTSLPSFNVFVEGSYEPKSSCLYQMPAHRPTIKKE
EESYPTAPALEAMSSSTMYFKQSPPSTPTTPSLPPQPGTSFLWDEHPLAPPSHPHSLGSS
LETGPLKSPRFPHFYQHSPPHSGGSVSGYESLGGGLVRTSSSSSSSSSSVSHPHGPPLEQ
PMYQLHRGAGGSSLAFRSLALGPCGPLLGDSLPSPPPRGPQGEGTCAVCGDNAACQHYGV
RTCEGCKGFFKRTVQKNAKYVCLASKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDS
LKGRRGRLPSKPKSPLQTEASPPSPPLSLLSALLRAYSHSTPRDLDYSQFSAADPPSSSS
DAEHIQLFYRLLTISMETTRCWADRLPGFSELQRDDQNLLIDSAFLELFVLRLAHRSMLS
EDKLVFCNGLVLHRFQCLRGFGEWLDSIRDFSTHLQSLNLDTSAFACLAALVLLTEQVPG
LKDSKRVEDLQNKVICCLRDHLGCGPSSSSSKAAPPLSRILGLRAELRSQRTQGLQRIFY
LKLEDLVPPPPLIDRFLDTLPY
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgagcaggcgaatacggtggtaatcagaggcaagaaaagcgatggactggac
gcgctgacacagactgcttttataaaagttatcactttcgtagacacaggttcggaagag
cgcgcccagcggagctcggagccccggcgatcggacacttcttctgcgacgcccgccgag
tcctccccgctccaggagccctgtcccggccgcagccacgccacccctcaatcccggaca
cccagcaccattcagcgcgaagctctttcaccagacatgccctgtgtgcaggctcagtac
gggcccgcccctccaggctcagcctactctggccagtccttcagttaccagggcgacagc
tacagctctgacctcatgacccccgactacaccaagctggacctgggcgggggcgagatc
tctgccgccgccgccaccacctccctccccagcttcaatgtctttgtggaggggagctac
gagcccaagtcctcctgcctctaccagatgcccgcacacaggcccaccatcaaaaaggag
gaggagagctacccgactgctccggcgctggaggccatgtcctcctccaccatgtacttt
aaacagtccccgccctccactcccaccaccccgtccctgcccccccagcctggcacctcc
ttcctgtgggatgagcaccccctggctcctccatcgcacccccactctctgggctccagt
ctggagacaggccccctcaagtcaccccgtttcccacacttctaccagcactcgccgccc
cacagtggcggcagcgtcagcggctacgagagtcttggagggggactggttcgaacctcc
tcgtcctcctcctcctcttcgtcctcagtctcccatcctcacggtccccccctggagcag
cccatgtaccagctgcaccgcggggccgggggcagcagcctcgctttccgctccctggct
cttgggccctgtggccccctactaggagacagcctgccctcgcctcctccacgtggcccc
caaggagagggcacctgtgcagtgtgtggggacaacgctgcctgccagcactacggcgta
cgcacctgtgagggctgcaaaggcttcttcaagcgcaccgtgcagaaaaacgccaagtat
gtgtgtctggccagtaagaactgtcctgtggacaagaggagacgcaaccgttgccagtac
tgccgctttcagaagtgtctgagtgtgggcatggtgaaggaggtggtacgtactgatagc
ttgaaggggcgccgaggccgtctgccttccaaaccaaagagccccctgcagacggaagcg
tcccccccttctccacccctcagcctgctctccgctctgctcagggcttattcccactct
acaccccgtgacctcgactacagccagttcagtgctgccgatcctccctcctcctcctca
gatgccgagcacatccagctcttctacaggctgctcaccatctcgatggagaccacgcgg
tgctgggccgacaggctgcccggcttctccgagcttcagcgtgacgatcagaacctgctc
atagactctgcctttctggagctgttcgtcctgcgactggctcacaggtcgatgctgtca
gaggataaactagtgttctgtaacggcttggtgctgcacaggttccagtgccttcgtggt
ttcggagagtggctggactccatccgggatttctccacccacctccagagcctaaacctg
gacacctctgcctttgcctgcctggccgccctcgtactgctcacagagcaagttccgggt
ctgaaggactcaaaacgggtcgaggacctacagaataaagtgatttgctgtctccgagac
cacctgggctgcggcccgtcttcctcctcgtccaaggccgccccccctctgagtcgcatc
ctgggcttgagggcggagctccgttcccagagaacccagggccttcaacgaatcttctat
ctgaagctggaggacctggtgccgcccccgccgttgatcgacaggttcctggacactttg
ccctactga
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