KEGG   Lates calcarifer (barramundi perch): 108890418
Entry
108890418         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ataxin-2-like protein
  KO
K23625  ataxin 2/2L
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcf03019]
    108890418
Messenger RNA biogenesis [BR:lcf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108890418
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 108890418
NCBI-ProteinID: XP_018542801
LinkDB
Position
LG23:complement(8766570..8777955)
AA seq 1059 aa
MLKQQQQPGSGGRKASNGTSGPAGMSSPVSGINSGNRTPAGRNRTSAKPSFQSSPVFEGV
YNNARMLHFLTAVVGSTCDIRVKNGSVFEGIFKTLSSRCELAVDAVHKRSEEEGSTSAPP
RREDITDTMIFSPSDLVTMICKDVDLNYATRDTFTDTAISSGRVNGEHKEKVLQRWEGGD
SNGESYDLDNDASNGWDANEMFRYNEVKYGVTSTYDSSLSMYTVPLEKGNSEVYRQREAR
AARLASEIESSPQYRHRVNLENDEGKSEEDKYSAVVRDGNDRERGRESPRDRDRERGRDS
PGASNREGKYIPLPQRQREMNRERERAERGPGGPPPHNRLSGGYRSTPPSSSSPRPPLPS
AAGPQPGASPSERNSPLSGRGGAYAPHHPQGSPSPGPGSGPASPYTPASPGGPAPTPASA
SAAPSPASPPAPHGHTVPHSHSLPHSLSDAGRPVNGVSTRTSPKAQRPPQSSRTVRTPNS
HSQSTATRSPKSGSSQDTPYLDTSSVSLPAQKTSGPAPLFPVDVNEILGAAVKERSAESP
SSTEESKSSKAPSVQQRSQIEELRKFGKEFRLQPSGGSSSSPSSPAAATPPAVSEVTQPS
TAKPSASDAHPASDPKPQPPAPSASQQPQPQPSPAPADDPTKDTTATSGATVAATTAPVS
DRQSPAAPQPARTPGSEEVRSEMTERTEGVADQVKKSTLNPNAKEFNPNKSPMPMTKPNT
APTPPRPTPPSPVVLQHPGGQGPLYTTPYLSYVSQIHTVQPPPMYQYTMSAVSQGKYART
KGSVVAQRSDHGTSAPPMLQAAASAAGAPLVASPYPQSYLQYNPQQYGQQQVIQAMTPYP
GQPMYSMLQGGARMIGQGGGPHPQALGPPGGPQFPAQGDGPQGPQQGIYAPQSFSHHSGA
VHQPQPSSTPTGNQPPPQHAAPSPGQNAQSGPQPQSLYHSGALSAPTPPNMPPGHTSPQG
SYPIQGYSIHSHQGMPPTYPLGQIAQAHVQGAMSAPHHSGSHGQPQLVMLQPPPQQGPGS
VPQHPQHGPQQGAHQHFYIGHPPAMQVQTHPAPFHPPGN
NT seq 3180 nt   +upstreamnt  +downstreamnt
atgctgaaacaacagcagcaacccggctcaggcgggagaaaagcatctaacggaacctcg
ggccccgccggtatgtcttccccggtcagcggcatcaacagcggcaacaggacaccggcc
gggaggaatagaacatctgcaaaaccatcattccagtcatctcctgtttttgagggtgta
tacaacaatgccagaatgctgcatttcctcacagctgttgtgggttccacctgtgacata
agagtgaagaatggcagcgtatttgaaggcatattcaagactctaagttctcggtgtgag
ttggctgtggatgcggtacacaaacgcagtgaggaggagggatcaacatcagccccacca
cggagggaggacatcactgacactatgatcttcagcccctcagacctggtgacaatgatc
tgcaaagatgttgacctcaactatgccacaagagacaccttcacagacacagccatcagc
tccggccgcgtcaatggagaacacaaggagaaggtcttgcagagatgggagggaggagac
agtaacggagagagttacgatctggacaatgatgcatccaatggctgggatgccaatgag
atgttccgttacaatgaagtgaaatacggagtcacatcaacatatgattccagtctctcc
atgtatactgttccactggaaaaaggtaactctgaggtctatcggcagagggaagcacgc
gctgcccgcctggccagtgaaattgagtcaagcccccagtatcgccaccgtgtcaacctg
gaaaacgatgagggcaagagcgaggaagataagtacagtgctgtggtgcgagatggcaac
gatcgggagaggggccgtgaaagtccccgtgacagagaccgcgagaggggtcgagacagc
cctggagccagcaacagggagggcaagtacattccattacctcagcgccagagggagatg
aaccgggagcgagagcgagccgagagaggtcccggcgggcctccaccccataaccgccta
agcggaggctaccgctccacccctccatcctcctcttcccccagacccccactgccctct
gctgcggggccgcagcctggcgcctccccatcagagagaaacagccctctgtcaggccga
ggcggggcctatgctccccaccacccgcagggaagccccagcccaggcccaggctctggc
cctgcgagtccgtacacacctgcctctcctggcggaccagcaccaaccccagcctccgct
tccgctgccccttccccggccagcccccccgccccacacggacacacagtcccccattcc
cactcactcccgcactcgctgtctgacgctggcaggcctgttaatggagtctctaccaga
acatcccctaaagcgcaaagacctccacagtcaagcaggacggtccgcactccaaactca
cactctcagtccacagctactcgctctcctaaatcaggctcttcccaggacacgccttat
ttagacacatcttctgtctcgctgcctgcccagaagacgtctggccccgcccctctcttc
cctgtagatgtgaatgagatccttggtgcagctgtgaaagaacgttcagctgaaagcccc
agcagcacagaggaaagcaaaagtagcaaagctccctcagttcagcaaaggtcgcagatt
gaggagctgcggaaatttggcaaggaattcaggctccagccgagtggcggcagctctagc
tctcccagctctccggcagcagcaacccctcctgctgtcagtgaggtcacccagcccagc
acagccaaaccctcagcatcagacgctcaccctgcttcagaccccaaacctcagcctcca
gctcccagcgcctctcagcagccccaacctcagccatcaccagctcctgctgacgacccc
accaaggacaccacagctacatctggtgctacagtagctgccaccacagcacctgtttca
gacaggcagtcgccggctgccccgcagccagccaggaccccgggaagtgaggaggtcagg
tctgagatgacggagcggacggagggtgtggcagaccaagtaaagaaatcaaccttaaac
cccaatgctaaagagttcaaccccaataaatctcctatgcctatgacgaagcccaacact
gcgcccactccacctcggccaaccccgccaagcccagtggtccttcaacacccaggtgga
caggggccactctacaccaccccgtacctctcatacgtctcgcagatccacactgtgcag
cccccaccaatgtaccagtacaccatgtctgcagtcagccagggaaaatacgccaggacc
aaaggctcagtagtggctcagcgctccgaccacggtacctcagcgccccccatgctgcaa
gctgcagcctcagcagccggggccccactggtagcgtccccctaccctcagtcctacctt
cagtacaacccacagcagtacggccagcagcaggtcatccaggccatgacaccataccct
ggacagccgatgtactccatgctgcagggcggtgccaggatgataggtcaaggcgggggt
ccccatccacaagccctgggaccgccaggaggtccccagttccccgcacagggagacgga
cctcagggaccacagcagggtatctacgctccacagtccttctcccatcactcgggtgca
gtgcatcagcctcagccctccagcaccccaacaggcaaccagccccctccccagcacgct
gcacctagccctggacagaacgcccagtcaggcccacagcctcagtccttgtaccactca
ggtgccctgtcagcacccaccccacccaacatgccaccaggccacacgtctccacagggc
tcataccccattcaaggctacagcatccacagccaccagggcatgccacccacatacccc
ctgggacagatcgcacaggcccatgtacaaggagccatgtctgctccccaccactcaggg
agccacggtcagccccagttagtgatgttgcagccgccccctcagcagggccccggctca
gtgccccagcacccccagcacggacctcagcaaggagcacaccaacacttctacatagga
catccgccggcaatgcaggtacagacgcatcctgctcccttccatccgcctggaaactaa

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