Lates calcarifer (barramundi perch): 108890766
Help
Entry
108890766 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: testis-expressed protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMM1
ATP-synt_I
Motif
Other DBs
NCBI-GeneID:
108890766
NCBI-ProteinID:
XP_018543284
LinkDB
All DBs
Position
LG23:4216063..4228571
Genome browser
AA seq
1064 aa
AA seq
DB search
MAESGRNGERRSEDKEGGGGTHKLSPVGTPSFGTKRHLPRGIVIQLTGTEGEWDSLDDSE
LIFSLDHDEDYPSISLSKERQLSVEDDRGLQSQAFHVPLSPSSPGSLGNCSATGPSFLSP
GPSSPTHRPLASLVKSLSTELELKEGSTLRPKPLLSLVKSISTEISRSEPEVSQSKSDSR
LNLHLWKQLTQPKNRSNGDSRTAPPSPSSLSPSAEGLKGGFFKMELEDTKRKLSEAVHEP
LSSMFSKIMREESAGSPKHQCRMQGAHQASSRGLGREGSTDTVLSDSPVRNTRKTDADVL
PSVFDWPSVRHLGRIHRSPCPVHHSRQHKREEELEICTDGDMMQVLAIETRRQARRPPAG
SQVPAPALVQTSPHPLPRMSLFCVAVLSYGYFILPLSPYFSGLALGLALGFLLGLLLIRM
GSSRSHCPAPPHRPAQTLLGEVILTGGNVNTEPDILKGWMNEVHDYDPETYHPALTHSVF
ATLEGSCLRLDSPRTNISRRATYDERVPEPTFVKSRCFHLAKSKVFLLPSVLARKRVWNP
KYPICVQLARGVNSLEDEGGRSEESRGEEPGAEPTSQKQSSSKPAHDLPTTLYLFGRTGR
EKEEWFRHFMFASTDSERDRQRPGRCVSRSGDPAAAQSVSAPSNIPSSRGSSRLGSSDDD
APCAPPVSCIPAANVSQTSSSTRGVSLLDYPSYMARLLAAEEMTPLSSPGASSTETSPTI
KGNCICDLAEYPGKSQTAWANALIGRIFWDFLRERHWADAVSHKIQKKLSNIRLPYFMNE
LTLTELDMGCSMPHITSTSRPEVNHRGLWVELQLVYRGALQMTLQTKFNLSKLGKEGGQD
TDCTTETGSPRCRPVLSVLADSDEESSSAGSSDEEELLLSEPQGPVGEKGSTPVTEGTGG
GRTGRKILRFVDKIAKSKYFQKATENEFIKKKFEEMSNTPLLLTVEVQELSGTLVVNIPP
PPTDRIWYSFCVPPKLDLRVHPKLGEREVTFCHVTEWIERKLQDEFQKVFVLPNMDDIYL
PLMHSGVDHPQASQHLSPQSQRSQSSSTESIERIPPEVSTAESD
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggcagagagtggaagaaatggggaaagaagaagcgaggataaagaaggaggtggtggc
acccacaaactctcccctgttggtaccccctccttcgggaccaaaagacatctcccccga
gggattgtgatccagctgactgggacagagggagagtgggacagcctagatgacagtgaa
ctcatcttctcccttgatcacgatgaggactacccgtctatatctctctctaaggagagg
cagctttctgttgaggatgacagagggttacagtctcaagctttccacgtccccctctca
ccctcctcacctggctctctagggaactgctccgccactggccccagtttcctctccccg
ggcccatcctcacctacccaccgacccctcgcaagcctggtcaagtctctgtccactgag
ctggagctgaaagaaggctccacccttagacccaagcccctcctcagcctcgtgaagtcg
atctccacggagatctcccgctcggagcccgaggtgtctcagtccaaatcggactctcgc
ctcaacctccacctgtggaagcagctgacccaaccaaaaaaccgcagcaacggggactct
cgtactgcgcccccttcaccgagctccctctcccccagcgcagagggtctgaaaggcggc
ttcttcaaaatggagctggaggacaccaagaggaagctctcagaggccgtgcacgaaccc
ctgagcagcatgttcagtaagatcatgagagaagagagcgcaggcagccccaaacaccag
tgtaggatgcagggggctcaccaggccagctccagaggtctgggccgtgaaggcagcacg
gacactgttctctcagattctcctgtgaggaatactagaaaaacagatgctgatgttttg
ccttctgtttttgactggccttctgtgagacaccttgggagaattcaccgcagcccctgt
cctgtgcatcacagcagacaacataagagagaggaggagctggaaatttgcactgatggt
gatatgatgcaagtattagccatcgagacacgcaggcaggcgaggagaccgcctgctggt
tctcaggtccccgcaccagccttggttcagacctcacctcatcctctgccccgcatgagt
ttgttctgtgtggcagtgctgtcttacggctacttcatcctacctctcagtccatacttc
tctggcctggctctgggattagcgctgggcttcttgctaggactgttgctcattaggatg
ggctcctccaggtctcactgcccagctcctccccacagaccagcacagaccctgctggga
gaggtgattctgacaggtggcaatgtcaacactgagcctgacatcctcaagggctggatg
aatgaggtgcatgattacgacccagaaacctaccatccagctctgactcactctgtgttt
gccaccctggagggctcctgtctccgcctggactccccacgtaccaacatcagccgcagg
gccacgtacgacgagagagtccctgagcccacctttgtcaagtcacgctgttttcatctt
gcaaagagcaaagtattcctgctgccatctgtgctggctcggaagagggtgtggaaccca
aagtatcccatctgcgtccagctggccaggggagtgaactccctggaggatgagggagga
aggtcggaggagagtcggggagaggagccaggagctgaaccgacgagtcagaaacaaagt
tcctccaaacccgcccatgatctgcccaccactctttacctcttcggccgcacgggacga
gagaaagaagagtggtttcgtcatttcatgtttgcgtccacggactcagagagggacaga
cagagacctggcagatgtgtgtccagatcgggtgacccagcagcggcacagagtgtttct
gccccgagtaatatcccaagcagcagaggctccagcagactgggcagcagtgatgatgat
gccccctgtgcccctccagtctcctgcatccctgcagctaatgtcagtcagacctccagc
agcaccaggggcgtttcactgctcgactaccccagctacatggctcgtctcctggccgca
gaggagatgacgcccctctccagccctggagccagcagcacagagacaagccccaccatt
aaaggaaactgtatctgtgatctggcagagtaccctgggaaaagccagaccgcgtgggct
aacgctctaattggtcgtatcttctgggacttcctgcgagagaggcactgggccgacgcc
gtctcccacaagatccagaagaagctcagcaatatcagactgccttactttatgaatgag
ctgactctgactgagctggatatgggctgctctatgccacatatcacctctacctccaga
ccagaggttaaccaccgaggcctgtgggtggagttgcagctggtgtatcgcggtgccctg
cagatgaccctgcagaccaagttcaacctgtccaagctgggaaaggagggcggccaggac
acagactgtacgactgagactgggagcccacgctgcaggcctgtcctcagcgtgttggcg
gacagtgatgaggagtcctccagcgctggctcgtctgatgaggaagagctgcttctctcc
gagcctcagggtccggtgggggagaagggatcaacaccggtaactgaagggacgggggga
ggcaggactggaaggaagattttgagatttgtggacaaaatcgctaaatccaagtatttc
cagaaggcgacggagaacgagttcattaagaagaagtttgaggagatgtccaacaccccc
ctgctgctcactgtggaggttcaggagctgtcagggactctggtcgtcaacatcccacca
cctcctactgacaggatatggtacagtttctgtgtgccacccaagctggatctacgcgtc
catcccaaactgggggagagggaggtgactttctgccacgtgaccgagtggattgagagg
aaactgcaggacgagttccagaaagtttttgtgctgccaaacatggatgacatctactta
cccctgatgcactcaggggtggatcaccctcaagcctcccagcacctgtcccctcagtcc
caacgctcccaaagctcctccacagagtctatagagaggatcccacctgaggtctccacg
gcagagtctgactag
DBGET
integrated database retrieval system
