Lates calcarifer (barramundi perch): 108890773
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Entry
108890773 CDS
T04895
Symbol
arhgap17a
Name
(RefSeq) rho GTPase-activating protein 17a isoform X1
KO
K20638
Rho GTPase-activating protein 17
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108890773 (arhgap17a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108890773 (arhgap17a)
Membrane trafficking [BR:
lcf04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108890773 (arhgap17a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR
RhoGAP
BAR_3
DUF5790
Motif
Other DBs
NCBI-GeneID:
108890773
NCBI-ProteinID:
XP_018543292
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All DBs
Position
LG23:4069498..4097737
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AA seq
933 aa
AA seq
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MKKQFNRMKQLANQTVGRAEKTEVLSDDLLQIERRMELVRVVSHNTHKRMVSCLQGHIGA
DAEKRHKKLPLTALSQAMVEGGNQLGEESLIGKMMEVCGEAENRLASELMQHELQIEKDV
LDPLSQLAEVDIPNILKQRKQLAKLVLDYDSARARWLQATKSIISGTNTQALTAKADLLK
EEVDEAMNKVELCKDQLAADMYSFFSKEGDYARFFVTLLEAQADYHRKSLTLLEGVLPTI
QAQQDSWTEKPAFGTGLDEHLKRSGREIALPIEACVMMLLETGMKEEGLFRIAAGASKLK
KLKAALDCSTSQLEEFYSDPHAVAGALKSYLRELPEPLMTYQLYDEWIQASSVSDPDKRL
QALWVVCDKLPKNNKTNLRYLVKFLAKLAQDSEVNKMTPSNIAIVLGPNLLWAKTEGSLA
EMAAATSVHVVAIMEPIIQHADWFFPEDVEFNVSGMFAMPIPASNHNNHLDYDCSTIERK
RPGSMVGPENDATRKDNTSNKHLDHTLRRGSNTLGRKQHTSPAFQPPLPPVEAPGQGHGA
GQVPQPSAEPQPQPQPQAPPGGSGPDSAQHSLAQGLAALAAAQQLLAQHTEELSNPKLRE
STPAPTPLLQRNGSGGGGQAAGQLGTGNTGAGSMGPSPHMMRRGTKKQAPAPPKPTNPPP
SQPCNSVNHTSSSGSSQSLSPTPRPLSGHSPTSPTSPTSQPCATPRRHSSNQPPIQAPSH
PPPEPPTQASPPAPLSGDQQSADPSPPSTPTPPDTPPPSAANQDAAAPPSPSPYQSGSLP
RPRPVPKPRNRPSVPPPPQPTTLNSDTNGICATAYKMMDPAMSFKGLSRALVPELAVDQQ
PATAPSSSSSSSSPPCLYQKTVTWTLRALSYKEETTTRSGPVLPLSTHHTQTHLHFSLLL
FSFFFCPSPYLQPSSERPTPAVIFSQSTVNEGL
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcagttcaatcggatgaaacagctcgccaatcaaacagttggcagagcggag
aaaacagaagtcctcagcgatgacctcctacagatcgaacggcgcatggagctggtgcgc
gtggtgtcccacaacacacacaagaggatggtgtcatgtctacagggacacatcggtgca
gacgcagagaagagacataaaaagcttcctctgaccgcactgtcccaagcgatggtggaa
ggtggaaaccaactgggagaagaatccttgatagggaagatgatggaagtgtgcggcgag
gctgagaatcgcctggcatcagagctgatgcagcatgagctgcagatagagaaggacgtt
ctggatcccctcagccagctagcagaggtggacatccccaacatcctgaagcagaggaaa
cagctggccaaactggtgctggactatgattctgccagagcaagatggttgcaggcaacc
aagtcaataatctcaggaacaaatacacaagcactgacggccaaggctgacctgctcaag
gaggaggtggatgaggccatgaacaaagtggagctttgcaaggatcaactcgctgcagac
atgtacagttttttctctaaagaaggcgactatgcccgcttcttcgtaacgctcttagag
gctcaagctgattaccacagaaagtctctcactcttctggagggtgtcttgccaaccatc
caggctcagcaagactcgtggacggagaagcctgcgtttggcacggggctggatgaacac
ctgaagaggagtggacgggagatcgccctgcctatagaggcctgtgtcatgatgcttcta
gagactggcatgaaggaagagggtctattccgaatcgcagcaggagcatccaagctaaag
aagctaaaggcggcgttggactgttccacttcacaactggaggagttctactccgacccc
cacgctgttgctggagcactgaagtcctacctgagggagctccctgaacctctaatgacc
taccagctttatgatgaatggatccaggcatccagtgtgtcagacccagataagaggctc
caggccctctgggttgtatgtgataagctaccaaagaacaacaaaaccaacctgaggtat
ctggtgaagtttttagccaaactggctcaggacagcgaggtgaacaaaatgactcccagc
aacattgctatcgtcctgggacccaatctgctctgggccaagactgaggggagtctggct
gagatggctgcagctacctctgtgcacgtggtggccatcatggagcccatcatccagcac
gcagactggttctttcctgaggatgtggagttcaacgtgtccggcatgttcgcgatgccc
atacccgcatccaaccacaataatcacctagattatgactgcagcaccatagagaggaag
aggcctggcagtatggtgggaccagagaacgacgcaacgcgcaaagacaacacctctaac
aagcacttggaccacacccttcgtagaggcagtaacaccttaggtagaaagcagcacact
tcacctgccttccagcctcctttaccccctgtggaggctccagggcaggggcacggggcc
gggcaggtcccccagccctcggccgagccccagccccagccacagccacaagctcctcca
gggggttcagggcctgacagtgcccagcatagcttggcgcagggtttggctgctcttgca
gccgctcagcagcttctagcccagcatacagaagagctcagcaacccaaagctacgtgag
tccacacccgccccgacccctctgctccagaggaatggctctggaggagggggccaggct
gcaggacagctgggcactgggaacactggggctggatccatggggcccagtcctcacatg
atgcgcagaggtaccaagaagcaggctcccgcccctcccaaaccgacaaaccctcctccc
agccagccctgcaattcagtcaaccacacctcttcctctggctcctcccagtccctcagc
cccactcccagacccctgtccggccactcgcccacctcgccaacctctcccacctcccag
ccatgcgccacgcccagacgccactccagcaaccagccgccgatccaggcgcccagccac
ccgcccccggagcccccgacgcaggccagccccccggcgccgctcagcggggaccagcag
agcgcggatccctcccctccaagcaccccgactcctccggacacccctccgccctccgcc
gccaaccaggacgcggccgctcctccgtccccgtctccctaccagtcgggctctctcccc
aggccacgacccgtccccaaaccccggaacagaccgagcgtcccgccaccacctcaaccg
accacactgaacagtgatactaacgggatctgtgccactgcctacaagatgatggacccg
gccatgtctttcaaaggactgagtcgagctttggtccctgagctcgctgtagaccagcag
ccagcgacggccccctcctcctcctcctcctcctcctcccctccctgcctctaccaaaag
actgtgacctggacactgagagcactgtcctataaggaggagacgacgacacgctctggt
ccagttctccctctctccactcatcatacacaaacacacctccattttagtctccttttg
tttagtttttttttttgtcccagcccatatctgcagccctcctcagagagaccaacccct
gctgttatcttctcccagtccacagtaaatgaaggactttaa
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