Lates calcarifer (barramundi perch): 108891068
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Entry
108891068 CDS
T04895
Symbol
tnxba
Name
(RefSeq) tenascin
Organism
lcf
Lates calcarifer (barramundi perch)
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Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
EGF_2
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
108891068
NCBI-ProteinID:
XP_018543710
UniProt:
A0A4W6D0I3
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Position
LG15:22404643..22412153
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AA seq
1287 aa
AA seq
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MLFTLGLLLLLTPFPSFQTTTNEKRDSTGSDVTKPNAVFTLSKPKTTSTLAKQAIRPTLK
PNTVNQTVLPTPAANQKPPTVNVTVTTKSKASPAVIQTTLSAAVKPAAASGTITNKDKHT
VAVNQTALAKSPASEVKASKDKPAPTGAPNAQSTSSKSASASGAKTTKDKLQPLVNQTVS
VKSPSTSDGKTAKEKPAPTVVQNVQSTSTKSTPASGAKTTKNKPTASVNQTVVAKTPSTS
DVKNSKDKPSPNTAQTSTPTKTATASSSVADKDKVTASANRTAVIKTPTTITKEKPAPSQ
PIKVVISDGCDSSKTKEQELKLKPGAPLVMTHKISLLPGGCTGGCEAEMAALKGRVARLE
REMSLLKDKCPCSANCPDDCSGNGECEKGKCVCHQGFVGPDCSKCAQGTECNKKATKGKA
KETVETVTPQKKDQKNEPEAKEYDSKSRVATTAKPGLVKTQAKQEASVKKVTIKGSSSTT
QTSRPTVGQVLLKHEGKKQEEARKGKTTVLTSKKVIQKTDLKVLKEGTASKMYPKSDQLK
DEPHTNVTQVNVKKSNGTAKIVTILSKSMGTNKTRTGKETLEQSTLAEKNVTQSSGHKRI
KTVKVDTVNVQSVQDNRNTEAGKGKVTQRSQYVVNTTIATTPDEARALQNKTSIHGSGTS
RRMGGSGLGSVKVVNISSYSFTITWSAPQGMFKNFTVIRREPRAEGDEDDHEEFEEEAQE
GAKNTAEVQVQTENTNTTVSSGKTVGSRGKAETKRISMVVPGNVRSVEFSNLRANTRYVL
HIYGTAAERRSKIHRVTAVTGPEPATEMVFSNVTESSLTVSWSKPKTTFTGFRITYTNIV
TGESHFVVMDSQQSYLVLSKLSAGTSYIISVTTTQGRAQSDALVSVITTVPAPPTHLQVV
NVTDTRAVLQWTPSLGKVDRFIISYESSKTPNVTVTVMLSGNLMEHQLRGLQRGTLYTVK
VLSQKDSLQSMAISTTFTTANVVKASEVGARSAVIAWKTITVVYHSYRVIYQVAGEETKE
VILDPTITEYKLTGLLPMSRYIVLVQGERDGHYTSIVTTEFITGKLRFPFPTECSQELLN
GALQSGEVDIYPQGKEGQAVRVYCDMETDGGGWTVFQRRMNGKTDFYRTWSEYSAGFGNL
SEEFWLGNELLHNLTSIGPVSLRVDMRSGNDTAYAHYANFTVDSEEKHYTLTMSGYTGTA
GDSMRYHNGRPFSTRDKDPDTLGLHCARAYMGGWWYKNCYKANLNGLYGINSNNQGVVWI
DWKGKDSSIPFTEMKFRPSRFSPATHG
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttactttaggacttctcctccttctcaccccatttccctcctttcaaaccacg
accaatgagaagagagactccacaggaagcgatgtgaccaaacccaatgccgttttcacc
ctttcaaaaccaaaaaccacttctactcttgccaaacaggccattcgccccaccctaaag
ccaaacacagtcaatcagacagttttaccgactccagctgcaaaccaaaaacctccaaca
gtcaacgttacagtgaccaccaaaagcaaggccagcccagcagtaattcaaaccactctg
tcggcagcagtaaagcctgctgcagccagtggaaccatcaccaacaaagacaagcacaca
gttgcagtcaatcagacagctttagctaaatctccagccagtgaagtgaaggctagcaaa
gacaagcctgcccccactggagctccaaatgctcagtcaacatcctcaaagtctgcttca
gccagcggtgctaaaaccaccaaagacaaactccaacctttggtcaatcagacggtttca
gtgaaatccccttcaaccagtgatgggaagactgccaaagagaagcctgcccccaccgtg
gttcaaaatgttcagtcaacatccacaaagtctactcctgccagtggcgctaaaaccacc
aaaaacaagcccacagcctctgtcaatcagactgttgtagcaaagactccctccacaagt
gatgtgaaaaactccaaagacaagccttcccccaacacagctcaaacttcaacacccaca
aaaaccgctacagctagtagttctgtggcagacaaagataaggtcacagcctccgccaat
cggactgctgtaatcaagactcccaccaccatcaccaaagaaaagcctgccccttcacaa
ccaatcaaggtggtgatcagtgatggatgtgactcaagcaaaaccaaggagcaggagctg
aagttgaagcccggcgctcctctggtgatgacgcataagatcagcctgttgcccggtggc
tgcactgggggatgtgaggctgagatggctgcactgaaaggaagagtggcccgactggaa
agagagatgtcccttctaaaagataaatgtccatgttctgcaaattgtccagatgactgt
agcggtaacggagaatgtgagaaggggaaatgtgtctgccatcagggatttgtaggtcca
gactgcagtaagtgcgcccaaggaaccgagtgtaataaaaaagcaaccaaaggcaaagcc
aaggaaacagtggagacagtgacccctcagaaaaaggaccaaaagaatgagccagaagcc
aaagagtatgacagcaaatccagggtggccactactgctaaacctggtcttgttaaaaca
caagcaaaacaagaagcttctgttaagaaagtaactataaaaggttcctcaagtaccaca
cagaccagtcgaccaactgttggtcaagttctcctgaagcatgagggaaaaaagcaagaa
gaggcccgcaaaggcaaaacaacagtcctgacctctaaaaaggttatccaaaaaactgac
ctcaaagttcttaaggagggaactgccagtaaaatgtaccctaaatctgatcaactgaaa
gatgaacctcacactaatgtaacccaagttaatgtgaagaaatccaatggcacggctaaa
attgtgaccattctgtccaagagcatgggaacaaacaaaaccagaacaggaaaggagacc
ttggagcagtccacactggctgagaagaatgttacgcaatcatctggacataaacgcatt
aagacggttaaagtagatactgtaaatgtgcaatctgtacaggacaacagaaacactgaa
gctgggaaagggaaagttacacagaggagtcagtatgtggtgaatacaaccattgccacg
acaccagacgaggctcgagctctgcagaacaaaacaagtatccatggctctgggacgagc
aggaggatgggtggatctggattaggttctgtgaaggttgtgaacatctcctcctatagc
ttcaccatcacatggtcagcaccacaagggatgttcaagaacttcactgtaatcagaaga
gagccacgggcagagggcgatgaagatgaccatgaggagtttgaagaggaagctcaggaa
ggagctaagaacacagctgaggtccaggtacagactgaaaacactaacacaactgtctct
tctggtaaaactgttggatcaagaggtaaagctgaaaccaagaggatctccatggtggtc
cctggcaatgtacgctctgtggaattcagtaaccttcgagcaaacacccgctatgtcctg
cacatatatggtactgcagctgagagaagatcaaagattcacagagttactgcagttaca
ggtcctgaaccagccacagagatggttttcagcaacgtaacagagtcttctctcactgtg
tcctggtccaaaccaaagaccacattcacaggcttcaggattacatacaccaacattgtc
acaggtgagagtcacttcgtggtcatggactctcagcagtcttacctggttctgtcaaag
ttgtctgctggaacctcctacattatctctgtaactactacacaaggcagagcccagagt
gatgcccttgtgtccgttatcaccacagtgcctgcccctccaacacatcttcaagttgtc
aatgtgacagataccagagctgtgctacaatggacacccagtctagggaaagtagaccgc
ttcatcatcagctatgaatcctccaagactcctaacgtgacagtgacagtgatgctgtct
ggaaatttaatggagcaccagctgagaggtctgcagagaggcaccttgtacacagtcaaa
gtcttgagccagaaggacagcctccagagtatggctatctcaacaacatttactactgct
aatgtggttaaagccagcgaggtgggtgctcgctctgcagtgatagcatggaaaaccatc
actgttgtttatcacagctacagagtgatctatcaggtagcaggggaagagacaaaggaa
gtgatcctcgaccctaccatcacagagtataagctgacagggctgctgcccatgtcacgt
tatatagttctggtacaaggcgagagagatggacactacacatctattgtcaccacagaa
ttcatcacaggtaaactacgattcccattccccactgagtgctctcaggagctgttgaat
ggagctctgcagtcaggagaggtggatatctaccctcaaggaaaagagggacaagctgta
agagtctattgtgacatggagactgatggaggcggctggacggtgttccaaaggaggatg
aatggaaagacagacttctacagaacctggagtgaatacagtgctggctttggaaacctg
agtgaagagttctggcttggaaatgaacttcttcacaacctgaccagtattggccctgtg
agcctaagagtggacatgcgatctggaaatgacacggcttacgctcactacgccaacttc
actgtcgattcagaggagaagcactacactctcaccatgtctggctacacaggaactgca
ggtgactctatgaggtaccataatgggcgtccattctcaacccgggacaaggatccagac
actctggggctccactgcgccagggcctacatgggaggctggtggtacaagaactgctac
aaggccaacctcaacggtctttatggcatcaacagtaataatcagggagtagtctggata
gactggaaaggtaaagactcctccattccattcactgagatgaagttcagaccatccagg
ttctcccctgcaactcatggttaa
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