Lates calcarifer (barramundi perch): 108891118
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Entry
108891118 CDS
T04895
Name
(RefSeq) leucine-rich repeat-containing protein 1 isoform X1
Organism
lcf
Lates calcarifer (barramundi perch)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
PDZ
LRR_1
PDZ_6
LRR_9
PDZ_2
Motif
Other DBs
NCBI-GeneID:
108891118
NCBI-ProteinID:
XP_018543775
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Position
LG16_LG22:complement(6983655..7009889)
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AA seq
888 aa
AA seq
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MFHCIPLWRCNRHVEMIDKRHCSLLYVPDEIYRYGRSLEELLLDANQLRDLPKPFFQLVK
LRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIMEIPESISYCKALQVADFSGNPLTRL
PESFPELRNLTCLSINDISLQVLPDNIGNLSNLVSLELRENLLTFLPESLSLLHRLEELD
LGNNELYSLPESIGCLVSLKDLWLDGNQLAEIPAEMGSMKSLLCLDVSENKLGQLPEELG
GLQSLTDLLVSQNLIDALPESIGKLRKLSILKADQNKLTYLPESIGNCESLTELVLTENQ
IQSLPRSIGKLKHLSNFNCDRNQLVSLPKEIGGCCGLNVFCVRENRLTRIPSELSQATEL
HVFDVSGNRLTHLPMSLTTLRLKALWLSENQSQPLLTFQTDEDPESGEKVLTCVLLPQQP
CEPDNKGSDKLARFGALESLVNDMADDTWNNKAMNRTSAIHFLDDDDEEEDDEKGTLLRR
ATPHPGELKTMKKAAENLRNDLNAAKGLDSNKNEECRNPHTNPSPKTSSQNWATTGFSWV
ANKECPQGGPQPFPASNRMCGCTSAEKAAEEIEQPKEDGAGQLSESDAFPRRFRHQRGET
REGRKFQHHRAFNTESGLHGDPVHNIKISSITGHLKSSLVTEKTPPQESLISQVPLRLQI
KVCGQRSSLGISIAGGKGSLPYKDRDEGIFISRVTKGGPSEKAGVHVGDRLLEVNGLSMQ
GATHHEAVSALRNAGSCIKMKVLRDRLLHQEVCDLDKPQDAQVVKGRQLCSQDGGGQRSK
QSKMESTEDCLSKKIEAVVCNGNGISDLESDLNRTLSELEAEALTKNDSLQVGKHTMTIP
RIILTHPSTSDEDVELLTQNPGREARHDFDIPDKREHPDCFDSAFYPP
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtttcactgtatacccctgtggcggtgcaaccgtcatgttgagatgatcgataaacgc
cactgctccctgctgtatgtgcccgatgagatttatcgctatggacggagtttggaggag
ctgttgctggatgccaaccaactccgagacttgcccaagccatttttccagctggtgaaa
ttaagaaaacttggtctgagtgacaatgagatccagagacttccaccagagatagccaac
ttcatgcaactggtagagctggatgtctctcgaaatgatattatggaaattccagagagc
atttcatactgcaaagctctccaagtggcagatttcagtggaaatccattaacaaggtta
cctgaaagctttccagagctgcggaatcttacatgcctttccatcaatgatatttcattg
caagttcttccagataacattggaaatctttccaatttggtatcactagaactcagagaa
aatctgctcacattcctaccagagtcactatctctgcttcatagacttgaagaactcgac
ctaggaaataatgaactatacagtctgccagagtcaataggctgtcttgtcagcttaaag
gacttgtggctggatggaaaccagttggctgaaatacctgcagagatgggcagtatgaaa
agcctgctgtgtctggatgtgtcagaaaacaaactagggcaacttcctgaggagttggga
ggcctgcagtcactaactgaccttctggtgtctcagaacctcattgatgctctaccggaa
agcattggaaaactacggaaactttctatattgaaagctgatcagaataaattaacatac
cttccagagagcattggcaactgtgaaagtcttactgaacttgtgctcacagagaaccag
atacagagtttgcccaggagtattgggaaattgaagcatctttccaatttcaactgtgac
agaaaccagctagtgtcgttacccaaggagatcggaggctgctgcggtctgaatgtcttc
tgtgtacgagagaaccgactgacgaggataccatcagagctgtcacaagccacagaactc
catgtgttcgatgtatctggcaataggctcacccacttaccaatgtcactgaccacgcta
cgactaaaagccttgtggttgtcagaaaaccagtcgcagcctctcctcacctttcagacc
gacgaggatcctgaatcgggcgagaaggtgctcacctgcgtgctgctgcctcaacagcca
tgtgaaccagacaataaaggctctgataaacttgcccgctttggagccctggagagcctg
gtgaatgacatggcagatgacacatggaacaacaaagccatgaacaggaccagtgccatt
cacttcctggatgatgatgatgaggaggaggatgacgaaaagggaactctacttcggcgg
gccacgcctcatcccggtgagctgaaaacgatgaagaaagcagccgagaacctccgcaat
gacctgaacgctgccaaaggcctggactccaacaaaaatgaggagtgtagaaatcctcat
actaacccgtcccccaagaccagtagccaaaactgggccaccacaggtttcagctgggtg
gcaaacaaagagtgtccacaggggggacctcaaccgttcccagccagcaaccgcatgtgt
gggtgcaccagtgcagagaaggcggcagaggaaattgagcaacctaaggaggatggtgcc
ggccagctgtcagagagtgacgccttcccacgtcggtttcgccatcagaggggtgaaacc
cgagagggcaggaaatttcagcatcacagagcttttaatactgagtctggtctccatgga
gaccctgtccacaacataaagatctcctccatcacagggcatctgaaatcttctttggtg
acagagaagacccctcctcaggaatcactcatctctcaagtgccattaagattacagatc
aaagtgtgtggccagaggagtagtctgggaatcagcattgctggtgggaaaggctctttg
ccttacaaagaccgtgatgaaggcattttcatttcccgagtaacaaaaggggggccatca
gaaaaggcaggggtccatgttggagatagattgctggaggtcaacggcctcagcatgcag
ggggccacccatcacgaggcggtcagcgccctcaggaatgccgggagctgcatcaagatg
aaagtgctcagagacaggctgctgcatcaagaggtgtgtgacctggacaagcctcaggat
gctcaggttgtgaagggacgacagctctgcagccaggacggcggaggccagaggagcaaa
cagtccaagatggagagcacagaagactgtttgtccaagaagattgaggcggttgtctgc
aacggcaacggcatttctgatttggagagcgacctgaataggaccttatctgaactggaa
gcagaggcattaacgaaaaatgattcacttcaagttggcaagcacacaatgacaatccca
cggatcatccttactcatccttctacctcagatgaagatgtggagctcttgacacagaac
cctggcagagaggcaagacatgactttgacattcctgacaaacgtgaacaccctgactgt
ttcgacagtgccttctacccaccctga
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