Lates calcarifer (barramundi perch): 108892344
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Entry
108892344 CDS
T04895
Name
(RefSeq) early growth response protein 1 isoform X1
KO
K09203
early growth response protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04371
Apelin signaling pathway
lcf04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
108892344
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
108892344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108892344
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
108892344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3446
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
108892344
NCBI-ProteinID:
XP_018545357
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MAATKAELLLSALQISDPLAGFPPPLSPLDGYPKLEELQMLLQNAAAGGSLLAASAAEGA
GLLSGEPGEFGGEETGGGDSLSELPDLQSLPPLTPRLPPLAYSGRFTFEPSTAAASGSGL
WAEPLLSLFTGLVSMAAPPPTASASSAVTSSVTSSSSMSQPNLSSVQISCGSADVASVFS
TAPTYTSSSASGPDLLLPPTDVQPAPQAFQPQGPPPAYPSSASRLGLQAVPMLPDYLLPQ
QQDGELGLNQDQKPVVLPQTLNPPPQPPLTPLSTIKAFSSQIQTQPQSSTYQAQLAKTGR
IRKSPAGRQCKTPPHERPYACPADGCDRRFSRSDELTRHVRVHTGQKPFQCRICMRSFSR
SDHLTTHIRTHTGEKPFACAECGRKFARSDERKRHAKIHQRQRDRKADRSSASSSAPKPP
VYTSPPTSSPCSSYSSPAHSSSSPAASLFAPSSSLSMQAASPCFTSSSSSSSLSHIYTSS
PSPHLYSSTCSSPMGSPQSELPSPHSSNIC
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaccaaggcggagctgctcctgtccgccctgcagatctctgacccgctggcc
ggcttcccgccgcctctctctccgctggacggttacccgaagctggaggagctgcagatg
ctgctgcagaacgccgcggccggaggctcgctgctggccgcgtccgcagcggagggagcc
gggctgctgagtggagagcccggggagttcggaggtgaggagacgggaggtggagattct
ctgtcggagctcccggacctacagagtctcccccccctcaccccccgcctcccccctctg
gcctacagcggccgctttaccttcgagccctcgacggcggcggcatctggtagcggcctg
tgggcggagcctctgctcagcctgttcacggggttggtcagcatggcagctcctcccccc
acagcttccgcctcatcagcagtgacatcatcagtgacatcatcgtcgtcgatgtctcag
ccgaacctcagctccgtccagatcagctgtggctctgctgacgtggcctccgtcttctcc
accgcgcccacctacacctcctcctccgccagcggccccgacctcctcctcccccccacc
gacgtccagccagccccccaggccttccaaccgcagggcccgcctcccgcctaccccagc
tccgcctccaggctgggcctccaggcggtgccgatgctgccggactacctcctgccgcag
cagcaggacggcgagctgggtctgaaccaggaccagaagcctgtggtgctgccacagacc
ctgaacccgcccccgcagcctccgctcacgccgctctccaccatcaaagccttctcctcg
cagatccagacacagcctcagagctccacctaccaggcccagctcgccaagaccggccgg
atcaggaagtcccccgcaggccggcagtgcaagacgccgccccacgagcggccgtacgcc
tgcccggccgacggctgcgaccgccgattctcccggtccgacgagctgacgcggcatgtg
cgcgtgcacacgggccagaagccgttccagtgccgcatctgcatgcgcagcttcagccgc
agcgaccacctgaccacgcacatccgcacgcacaccggagagaagccgttcgcctgcgca
gagtgcggacgcaagttcgcccgcagcgacgagcgcaagaggcacgccaagatccaccag
aggcagcgggaccgcaaggccgacaggagctccgcctcctcctccgctcccaaacccccc
gtctacacctcccctcccacctcctccccctgctcctcctactcctcccctgctcacagc
tcctcctcacccgctgcctcgctcttcgccccctcctcctccctcagcatgcaggccgcc
tccccctgcttcacctcctcctcctcctcctcctcgctgtcgcacatctacacctcctcc
ccgtccccccacctctactcctccacctgctcctctccgatgggaagtcctcagtcggag
ctgccctccccccacagctccaacatctgctga
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