Lates calcarifer (barramundi perch): 108892673
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Entry
108892673 CDS
T04895
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108892673
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
108892673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
Dehydrin
Motif
Other DBs
NCBI-GeneID:
108892673
NCBI-ProteinID:
XP_050923979
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MEPAWRQQGRGRGRSQEGHGERSRPPQKERERPGAAAGAWAAGRGARTKTATAPGPEPPQ
GVSVQSKFEEIRKSNQAAAQRLVESRISSSSSDEDDDGDVDHKEGKTGKILESTFTTYTD
QTGGDSTGLVRTGQYVSDLFQSGALTCLICIASVKRTQAVWSCSSCFSLFHLPCIQKWAR
DSVFLVSSVTDEDFGQKQHPWPCPKCRAEYPPSATPNRYMCYCGKLQDPPADPWLVPHSC
GSICQKELKPTCGHTCLLLCHPGPCPPCPKMVSVPCMCGKAKPLPRRCSNKPWSCQQQCG
KLLLCRQHTCSQPCHTECSPCPRVSVQRCVCGREKAERPCASPRWTCQQVCGSVLSCGNH
TCEVVCHDGVCPPCPRSVSRSCPCGKTKSSLPCTEEVLLCGDTCDRRLSCGKHTCSMRCH
RGSCETCRQEVEKECRCGKYRKLMPCHREYLCDSKCPKTRSCQRHQCRRKCCPGNCPPCD
QSCSRTLGCRNHKCPSVCHQGSCYPCPESVEVRCSCGSTVLSVPCGRERSTRPPRCKEPC
RRPPSCHHPTREAHRCHPGPCPPCRQTCLLPLPGCSHTCPQSCHDLVLVKSQQVQLAGPW
EQPTEPAFVKKALPCPPCQVPIPTACYGGHEVSPVPCHRQGPFSCRRPCGRPLTCGNHTC
GRECHLVTDGNKCEVCEDGCSKP
NT seq
2050 nt
NT seq
+upstream
nt +downstream
nt
atggagccggcctggcgtcagcagggccggggccgaggccggagccaggagggtcacggt
gaaaggtcacgacctccgcagaaggagagagagagacctggagctgctgcaggagcgtgg
gcggcgggacgaggagcgaggacgaagaccgccacagctcctggacctgagcctccacag
ggtgtgtccgtccagtccaagttcgaggagatcaggaagtccaaccaggccgctgctcag
cgcctggtggagagccgcatcagctcctcctcctctgacgaagacgacgacggagacgtc
gaccacaaggaaggaaagacagggaagatcctggagtccaccttcaccacctacaccgac
cagacaggtggtgactccacaggtctggtccggaccggtcagtacgtcagtgacctgttt
cagtccggagctctcacctgtctgatctgcatcgcctccgtcaagaggacacaggcggtg
tggagctgctccagctgtttctccctcttccacctgccctgtattcagaaatgggccaga
gactcggtcttcctcgtctcctccgtcactgatgaagacttcggtcagaagcagcacccc
tggccgtgtccaaagtgtcgagctgaatatcctcccagtgccacgcccaacaggtacatg
tgttactgtgggaaactgcaggatcctccagctgacccctggttggttcctcactcctgc
ggctccatctgtcagaaggagctcaaacccacctgtggacacacctgtctgctgctctgt
caccccggtccctgtcctccgtgtccaaagatggtgtcagtcccctgcatgtgcggcaaa
gctaagcccctcccccgtcgctgtagcaacaagccgtggtcgtgtcagcagcagtgcggc
aagttgttactctgcagacagcacacctgttcacagccctgtcacacagagtgctccccc
tgtcccagagtcagcgttcagaggtgtgtgtgtggtcgagagaaggcagagagaccgtgt
gccagcccccgctggacctgccagcaggtgtgtggttccgtcctctcctgtgggaatcac
acctgtgaggtcgtgtgtcatgatggagtttgtcctccgtgtcctcgctccgtcagcaga
tcctgtccctgtggaaagaccaagtcgtctctgccgtgcacagaggaagtgttgttgtgc
ggcgacacatgcgaccgccgcctgtcgtgtggaaaacacacctgttcgatgagatgtcac
cgagggagctgcgagacctgcagacaggaggtggagaaggagtgcaggtgtggtaaatac
aggaagttgatgccgtgtcatagagaatacctgtgtgactccaaatgtcctaaaaccagg
agctgccagagacaccagtgcaggaggaagtgttgccccggtaactgccccccctgtgac
cagagctgcagtcgaactctgggctgtcgaaaccacaagtgtccgtccgtctgtcaccaa
ggtagctgctacccctgtccagagtccgtggaggtccggtgttcctgtggctccaccgtc
ctgtctgtgccctgtggtcgagagaggagcaccagaccgccccgctgcaaagagccctgc
aggcgtcctccgtcctgccaccacccgaccagagaggcccaccgctgccacccgggcccc
tgccccccctgcagacagacctgcctgctgccgctgcccggctgcagccacacctgtcct
cagtcctgccacgacctggtgctggtcaagtctcagcaggttcagttagcaggaccgtgg
gagcagccgactgaaccagcgtttgtgaagaaagctctgccctgtccaccatgtcaggtt
cccataccgacagcctgttacggaggacacgaggtcagcccggtgccgtgtcatcgtcag
ggtccgttctcctgcagacgaccgtgtggacgacctttgacctgtgggaaccacacctgt
ggcagggagtgtcacctggttaccgacggcaacaagtgtgaggtgtgtgaggacggctgc
tctaagcccc
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