Lates calcarifer (barramundi perch): 108893476
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Entry
108893476 CDS
T04895
Name
(RefSeq) leucine-rich repeat and calponin homology domain-containing protein 2 isoform X1
Organism
lcf
Lates calcarifer (barramundi perch)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
CH
CAMSAP_CH
SCA7
CDC24
Motif
Other DBs
NCBI-GeneID:
108893476
NCBI-ProteinID:
XP_018547053
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Position
LG20:12961266..12995101
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AA seq
798 aa
AA seq
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MRMGGETAAVRCYYCKSNFFFTKMASSQGGVGAVTALQSHHYSSGPHWSPGVSQFQHQQQ
QHHTARSLDRALDDAVCSGILNLSGRKLREYPGMSYDLTDTTQADLSKNRLTEIPPEVCL
FAPLESLNLYHNCIKCIPEAIINLQMLTYLDISRNLLSVLPKYLFNLPLKVLLVSNNKLV
SIPEEIGKAKELMELDVSCNEIQVLPTQVGRLQALRELNIRKNCLHMLPEELADLPLIRL
DFSCNKITEIPPAYRKLRQLQHIILDNNPMQSPPAQICLKGKVHIFKYLNIQACRMDKKP
DTLDLPSLGKRCLPQPLTDSMEDFYPSKNHGPDSGIGSDNGDKRLSTTEPSDDDTVSLHS
QVSETARADALSLLSKMDSCKDQDLYDFIEPNPDEDPALSECDGQQSSHVSCIKELEKVL
NMSHQSKDKDSWKEESGSDKEQLVEEEDDELKEVLDLRKIAVQLLQQEQQNRRRSLICRA
ESLIHRRRVTGRAHRFLSHSGSSSSKPRPPPQTARSASLDEGSSGASVLSGQVQTVCVSH
SLCDISSLECAQNYSNFNSLLFLKPSSSCSFDGSLKTDQSDSEPKWPEVPPVLNQNEDRR
RNKYLRKDYLKYKCQSARKNSSGNDDCEEGLRNTDFSTTLTVFGLKPRSAFTRGSRQEYS
STDPSFTMRRKMEHLREEMEQIGLLRQNIESRLKVLLPDDVGAALMDGVVLCHLANHICP
RSVASIHVPSPAVPKLSMAKCRRNVENFLDACKKLGVPQDKLCLPHHILEERGLVKVGVT
VQALLDLPALKPTQLSAV
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatgggcggagaaactgccgctgtgcgctgttattattgtaagagtaatttcttt
tttacgaaaatggcgtctagtcagggaggtgtgggagctgtcacggctctacaaagccat
cactattccagcggacctcactggagcccgggcgtcagccagtttcagcaccagcagcag
cagcaccacacggcccgcagcctggaccgggctctggatgatgccgtgtgctcggggata
ctgaacctgagcggtaggaagctgagagagtacccggggatgagctacgatctgaccgat
acaacacaagcagatttgtccaagaatcgcctcacagaaatccctccagaagtatgtctg
tttgcccccctcgagtctctcaacctctaccacaattgcatcaagtgcatcccagaagct
atcatcaatctgcagatgctgacttatcttgacatcagtcgaaatctcctgtcagttttg
ccaaaatacctgttcaacctccccctcaaagttctgcttgtgagcaacaacaagcttgta
tccatccctgaggagatcggcaaggccaaagagttgatggaactggacgtaagctgtaat
gagatccaagtgctgccaactcaggtggggaggcttcaagccttacgagaactcaacatc
aggaagaactgtcttcacatgctgcctgaggagttggctgacctgcctctcatccgactt
gacttctcctgcaataagatcacagagattcctccagcctataggaaactcaggcagctg
cagcacatcatcctagacaacaatcctatgcagtctcctcccgcacagatttgtctcaag
ggtaaggtgcacatattcaagtacctgaacatccaggcgtgtaggatggacaagaaaccg
gacaccctggacctcccttctcttggcaagcgttgccttccgcagcctcttacagatagc
atggaagatttttatcccagtaagaatcacgggcctgactctggaattggtagtgacaat
ggtgacaagaggctgtcaacaacagagccctcagacgacgacactgtcagcctgcactct
caggtctcagagacagcccgtgctgacgccctctctctcctctccaaaatggactcttgc
aaagatcaggatctgtatgactttatagagcccaaccccgatgaggatcctgctctgtca
gagtgtgatgggcagcagagcagtcacgtgtcttgtataaaggaactggagaaagttctt
aatatgtctcaccaaagcaaagataaagacagctggaaagaggagtcaggttctgacaag
gagcagctagttgaggaagaggatgatgagctgaaggaagtgctagatctgaggaagatt
gccgtgcaactcttgcagcaggagcagcagaacagacgacggtccttaatttgcagagca
gagagtcttattcaccgacggagagtgacgggccgggcacacaggttcctaagtcactct
ggaagctccagcagcaaaccaaggcccccacctcagactgctcgaagtgcttctctggat
gaaggaagtagtggagcatcagtgctaagtggacaggtacaaacagtttgtgtctcacat
tccttgtgtgatatttcctctttggagtgtgcccagaattactctaattttaactctctg
ctttttttaaagccatcttcttcctgctcctttgatggcagtctgaagacagatcagtca
gattctgagccgaagtggcccgaagtcccgcccgtcctcaatcagaatgaggaccgcagg
aggaacaaatacctgagaaaagattatctaaagtacaagtgtcagagtgctcggaaaaac
tccagcggcaatgatgactgcgaggagggcttgcgcaacactgatttcagcaccactttg
acagtgtttggactcaaaccaagatcagccttcaccagaggaagccgtcaggagtacagc
tccactgaccccagtttcaccatgaggaggaagatggagcacttgagagaggaaatggaa
cagataggactcttacggcagaacattgagtccaggctgaaggtgttgcttccagatgat
gttggagctgctctaatggatggagttgtcctttgccatttagccaatcacatttgtcct
cggtctgttgccagcatccatgtaccatcacctgcagtgccaaagcttagcatggctaaa
tgccgtaggaatgtggagaacttcttggatgcctgtaagaagctgggtgtaccacaggac
aagctttgtctgccccatcacatcctagaggagcgcggtttggtgaaggttggtgtgacc
gtccaggctctgctggacctacccgcgttgaaacccacacaactgtcagctgtttga
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