Lates calcarifer (barramundi perch): 108893827
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Entry
108893827 CDS
T04895
Symbol
nova1
Name
(RefSeq) RNA-binding protein Nova-1 isoform X1
KO
K14944
RNA-binding protein Nova
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108893827 (nova1)
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108893827 (nova1)
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KhpA-B_KH
DUF1233
Motif
Other DBs
NCBI-GeneID:
108893827
NCBI-ProteinID:
XP_018547738
UniProt:
A0A4W6DXC3
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Position
LG20:5970081..5995591
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AA seq
501 aa
AA seq
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MMMAGGGGAAVDHNGIYSNPNLHSLQQPHMEADNPDSRKRPLETPTEEAGCTKRTNTGEE
GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVE
ALNGVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGG
ATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCL
NISYSNVSGPVANSNPTGSPYANTAEVLPNAAAAAATASSLLGQAGLTGMGAFPAAMSSF
SGNDLLAITSALNTLASYGYNTNTLGLGLNPAAASGVLAAVAASANPAAAAAANLLASYA
SDASSSAGHPATGLGGFSLGSLAAATGASNGYLNASSPLMASSLLATEKLADGAKDVVEI
AVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQY
LISQRITYEQGVRATNPQKVG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggccggtggtggcggagcagccgtggaccataacgggatttactcaaatcct
aacctccacagcctacagcagcctcacatggaggctgataacccggactcccgcaaacga
ccgctggaaactccgacggaggaggccggctgtaccaagcgtaccaacactggagaggag
ggtgagtacttcctgaaggtgctgatccccagctatgcagccggctctataattggcaag
ggcggccagaccatcgtacaactgcagaaagagacgggtgccaccattaagctgtccaaa
tccaaagacttctacccaggaacaacagaacgcgtctgtctgatacagggtacagtcgaa
gccctcaatggtgttcacaacttcatcgcggagaaagtccgcgagatgccccagagcgca
cagaaacccgaaccagtcagcatactgcagccacagaccactgtcaacccagaccgcgtc
aaacaggccaaattgatcgtgcccaatagcacagctgggctgatcattggcaagggcgga
gccacagtgaaagcagtaatggagcagtcaggggcttgggtgcagctctcccagaagcca
gagggcatcaacctgcaggagcgagtggtaaccatcagtggggagcctgagcagaaccgc
aaggctgttgaaatcatagtacagaagatccaggaggaccctcagagcagcagctgtctc
aacatcagctattctaacgtctcgggcccagtggccaactctaaccccacaggctccccc
tatgctaatacggccgaggtgctgcccaacgcagccgcagcagctgccactgcctccagc
cttctgggccaggccggcttgacagggatgggcgccttccccgccgccatgtccagcttc
tctggtaatgatctgctggccatcacctcagccctcaatacactggccagctatggctac
aacactaacaccctgggcctaggcctcaaccctgcagctgcatctggggtccttgctgca
gtagcagctagtgctaacccagctgctgctgctgcagctaacctgctggcatcctacgcg
agcgatgcctccagcagtgctggccaccctgctacgggccttggtgggttctccctgggt
tctctagcagctgctacaggggcttccaatggttacctaaatgcttcatccccactgatg
gcctcctccctattggcaacagagaagctggcggatggggccaaggacgtggttgagatt
gctgttccggagaatctggttggtgccattttggggaaaggagggaaaacgctggtagag
taccaggagctaacaggagcccgcatccagatctccaaaaagggagagttcattcctggt
actcggaaccgtaaagttaccataacagggtccccagccgctactcaagcagcgcagtat
ctgatcagccagcggatcacttacgagcagggtgtgcgtgctaccaacccacaaaaggtg
ggctaa
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