Lates calcarifer (barramundi perch): 108894126
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Entry
108894126 CDS
T04895
Name
(RefSeq) calpain-1 catalytic subunit-like
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04141
Protein processing in endoplasmic reticulum
lcf04210
Apoptosis
lcf04217
Necroptosis
lcf04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108894126
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108894126
04217 Necroptosis
108894126
04218 Cellular senescence
108894126
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108894126
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
108894126
Peptidases and inhibitors [BR:
lcf01002
]
Cysteine peptidases
Family C2: calpain family
108894126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
GBV-C_env
Motif
Other DBs
NCBI-GeneID:
108894126
NCBI-ProteinID:
XP_050924162
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All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MPENGTCASVINLRYQDGSEGSPSNPAKYKNQAYAQLRENCLRRGSLFVDSTFPPDNRSL
GDLSSLKSWQEDEVEWLRPAEILKRQNNSSEPAFCVQGASRFDFGQGYVGNCWFLASISA
LTLQKRLLAQVVPMDQTFKNYAGIFHFRFWRFGQWVDVVIDDHLPTLNNQLLSVHCNGGN
EFWVPLLEKAYAKVCGSYADMSAGLPSEACKDFTGGVAMMFQLREVHSAGHDVKLWNQLT
NATECNSLICCGTAQKGDKLVNTVAHTGLVDAHAYSITGVTEVTYYGSKVRLVRIMNPWG
KTEWNGKWSDKSDLWNSVSQADREKCFNRDNGEFWMELEDFCHYFLMMFICCENPNFLDG
DTDTQWKCQIYDGKWVAGRSAGGNVNSSTFATNPQYRIQVTILDKDEKEDQNILISLMQK
PEQGHRKKRRLNPVGLTLFKVCIRKFCLLNRR
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaacggaacctgcgcctctgtcattaacctgcgttaccaggatggcagcgag
ggcagcccctccaaccctgccaagtacaagaaccaagcctatgcgcagctgagagaaaac
tgcctccgcagaggctcgctgtttgtggacagcaccttcccacctgacaaccgctctctg
ggagacctgtcaagtctgaagagctggcaggaggatgaagtggagtggcttcgtccagct
gaaatcttgaaaaggcaaaacaacagcagtgagcctgctttctgtgttcagggagcctca
cgctttgactttggtcagggctatgttggtaactgctggttcctggcttcaatttctgca
ttgacattgcaaaaacgcctgttggcccaggttgtgccaatggaccagaccttcaagaac
tatgcaggaatatttcatttcaggttctggaggttcggccagtgggtggacgttgtcatt
gacgaccacctgccaacactgaacaaccagttgctgtctgtgcactgcaatggaggaaat
gagttctgggttcctctgctggagaaggcgtatgccaaagtgtgcggttcctacgcagac
atgagcgctggcttaccatcagaggcctgcaaggatttcactggaggcgtggccatgatg
ttccaactcagggaggtccatagcgcaggccacgatgttaaactgtggaaccaactaacc
aatgccactgagtgcaactcactgatttgctgtgggactgcccagaagggggataaactg
gtgaacactgtggcccacactggactggtggatgcccatgcctactctatcacaggtgtc
actgaggtgacgtattacggctccaaagtgaggctggtgcgaatcatgaacccctggggc
aaaacggagtggaacggaaagtggagcgacaagtcagacctgtggaacagtgtgagccag
gcggatcgggaaaagtgctttaatcgtgacaatggagagttctggatggagctggaggac
ttctgccattatttcctcatgatgttcatctgctgcgagaaccccaacttccttgatggt
gacaccgacacccagtggaaatgccagatttacgatggcaagtgggtggcggggagatct
gcaggtggcaacgtgaacagctctacctttgccacaaaccctcagtatcgcatccaggtg
accatcttggacaaggatgagaaagaagaccagaacatcctgatttctctgatgcagaaa
ccagagcagggccatcgcaagaagagacgcctcaacccagtcggactcaccctcttcaag
gtctgcattcggaaattttgtctcttaaatagaagataa
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