Lates calcarifer (barramundi perch): 108895485
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Entry
108895485 CDS
T04895
Name
(RefSeq) protein lin-54 homolog isoform X1
KO
K21776
protein lin-54
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
108895485
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Gene cluster
GFIT
Motif
Pfam:
TCR
MSL2-CXC
Motif
Other DBs
NCBI-GeneID:
108895485
NCBI-ProteinID:
XP_018549842
UniProt:
A0A4W6CWP8
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Position
LG9:19080681..19139308
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AA seq
813 aa
AA seq
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MDVVSPELNSLLPDEIMDTEAIEDVPQPQPVATTVQSEPSDDTSVPMETDTPMVSESLSL
CSDAASTEHTQDLTTSTATDSTLCISSGSQIPISISSSSSPLLTLKPALATSTATTKTTD
SVTGTSVSTSGLQKLTAPFTISPANHQIILNKVASSQATEAAKSVGTQPQVIKQEGQKLL
VTAIGKSGQPIVLQLPHTGSKPGVSQTSGDTKSQAPQFKVVTIGGRSELKPVVGSASNQV
TTLQAQQLKAVQIAKKTPASSAAPIKFIITKTVNSKGLSPQTSVPPVIAGRVLTQNSPVI
PPRTITLSETHNTSIQSIPGKKIAISPLKTPSKVTVVSVASPTSNTSQKSVALPVNVALG
QQILTVQQSTSASPVKVATSQSTAQSIKPVQSVAVGGVGGSQFKTIIPLATQPNVQQIQV
PGSRFHYVRLVTATTASSTGQPSGPSTSSIQTAKPMVVSTGAVRMSVPIVPAQTMKQVAP
KPLTSAAQVVTTTQTQQRLIMPATPLPQIQPNFTNLPPGTVLAPAPGGGNVGYAVVPAQY
VTQLQQSPFVTLASSSGFPASTGIQTQARLPLNGSLSTAETTSRPRKPCNCTKSQCLKLY
CDCFANGEFCNNCNCNNCFNNLEHETERLKAIKTCLDRNPEAFKPKIGKGKEGESDRRHS
KGCNCKRSGCLKNYCECYEAKIMCSSICKCIGCKNFEESPERKTLMHLADAAEVRVQQQT
AAKTKLSSQISDLLMRTTPVISSGGGRLPYTFVTKEVLEATYECLLEQAKKAEQTHQPQA
EAERMILEEFGHCLMRIISSAGKAKADCASINC
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggtgtcaccagagctcaacagcctccttcctgatgagatcatggatactgag
gccatagaggatgtccctcaaccccaacctgtcgccaccacggtccagtcagagcccagc
gatgatacatcagtcccgatggaaacagatacgccaatggtttcagaaagtttgagcctg
tgttcagatgctgcttcaacagaacacactcaggatctgactacctctacagccacagac
tctacactctgcatcagctctggaagtcagattcctatctcaatttccagttcgtcatca
ccccttcttaccctcaaaccagctctggctacttccacagccacaaccaaaactacagat
agtgtaactgggacaagtgtctctacaagtgggttacagaagctcacggctccgttcacc
atctctcctgcaaaccaccagatcattctgaacaaggtggcctcatctcaagccacagaa
gcagcaaagtctgtgggtacacagccccaggtcatcaagcaggaaggacaaaaactcttg
gttacagcaataggaaagtcagggcaacctattgtgttgcagttgccccacacaggcagc
aagcccggagtttcacagacttcaggagataccaagtctcaagctccacagtttaaagtg
gtgaccattggtgggaggtcagaactgaagccggtggtgggcagtgctagcaatcaggtg
accacattacaggcccagcagctgaaggctgtacagattgctaagaaaacaccagcatcc
tcagctgcaccaatcaaatttatcatcacaaaaactgtcaacagcaaaggcctaagtcct
cagacatcagttcctcctgttattgctggacgggtcctgacacagaattctccagtgatt
cccccaaggaccatcactctctctgaaacccacaacacaagtatacagagcatccctggg
aaaaaaattgcgatatcacctcttaagactcccagcaaggtaactgtggtatctgtggct
tccccgacctccaacacctctcagaagtcagtagcgctgcctgtcaatgtagcacttggc
cagcagatcctcacagtccaacagtccacgtctgcatctccagttaaggtggccaccagc
caaagcacagcacagagtattaaaccagtgcagtctgtggctgtgggaggcgttggtggc
tcccagttcaagaccatcatcccactggctacccagccgaatgtgcagcagattcaggtg
ccaggaagcaggtttcattatgtccgcctcgtcacagcaacaacagcgagcagcacagga
cagcccagtggtcccagcaccagctccatacagacagctaaacctatggtggtcagtaca
ggagcagtgaggatgtctgtccctatagtcccagcacagaccatgaaacaggtggcacct
aagcctttgacatcagcagcacaagtagtaaccaccactcagacccagcaacgcctgatc
atgcctgcaactccactgccccagatccagcccaatttcaccaatctccctccaggcact
gtcctggcaccagctcctggaggtgggaatgtgggctatgcagtggtgccagcacagtat
gttacacagctccagcagtcaccttttgtgactcttgccagcagctctggtttccctgca
tccactggtatccagactcaggccaggctgccacttaatggcagcttgtcaacggcagaa
acaacctcaagaccaaggaaaccatgcaactgcaccaagtcacagtgtcttaaactatac
tgtgactgctttgcaaatggagagttctgcaataattgtaactgcaataactgcttcaat
aacctggaacatgaaacagaacgtctcaaagctataaagacgtgtctggaccggaatcca
gaggccttcaaacctaaaattggtaaaggcaaagagggagagtcagaccgtcgacatagc
aaaggctgcaactgcaaaagatcaggctgcctgaagaactactgcgagtgctatgaggca
aagatcatgtgctcgtccatttgcaaatgcatcggctgcaagaactttgaagagagcccg
gaaaggaagacgcttatgcacttggccgatgcagcagaagtgagagtacagcagcagaca
gcagccaagaccaagctgtcctcacagatctcagacctgctcatgcggacgacgcctgtt
atttcaagcggaggcgggaggttgccatatacgtttgtaacgaaggaggtgcttgaagcg
acgtacgagtgtctgctggaacaggccaaaaaggcagaacagactcatcagcctcaggcc
gaagcagagaggatgatcctggaggagttcggacactgcctcatgaggataatcagctct
gcagggaaagccaaagcagactgtgcctccatcaactgctag
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