Lates calcarifer (barramundi perch): 108895824
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Entry
108895824 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: F-box only protein 16
KO
K10299
F-box protein 16
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108895824
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
108895824
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
PRIMA1
DUF4508
Motif
Other DBs
NCBI-GeneID:
108895824
NCBI-ProteinID:
XP_018550276
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Position
LG7_1:complement(18647968..18651706)
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AA seq
386 aa
AA seq
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MPHAPRSPANCAKTQTKLSAWTPLNHPVANSKVFEERRSLLAKWFDRWSDSQRKAVLQDF
VLSCSQEQLRFLSVSVSRQLPLQAADFTCLLPRALCLYLFSFLDPRSLCRCAQVSWHWKS
IVELDQLWMPKCLRLGWCLNFSPTPLEQGVWKRHYIQTVQELRLTLLQTASSQQQFTIPD
VTMLSSGHEDLLEPALLTEERPLSATQRAGSSLRTRLIKEKQPTAPPPWRDSDRYPXDTL
RFNYLDNLDPVQQALRAQMKSTASTCRSNTLKPDGGSKKTLSEAKYKLRKAKSLMFLSSN
CRPQHPPPPPPPPPPHHHHHHQTQSRPQWASCSNGDTITKETARSLLRLAQWNAGICPGP
VRAAVPQLSAEALRASRRSHRSSPST
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgccacatgcaccaaggtcaccggcaaactgtgccaagacgcagacaaaactgagcgcc
tggactcctctgaaccaccctgtggcaaacagcaaggtgtttgaagagagacgaagcctc
ctagcaaagtggtttgatcggtggtctgacagtcagaggaaggcagtgctgcaggacttt
gtactgagctgttctcaggagcagctgaggttcctgagtgtgagcgtgagcagacagctc
cccctgcaggctgcagacttcacctgcctgctgcccagagctctctgcctctacctcttc
tccttcctggaccctcgcagcctctgtcgatgtgcacaggtgagctggcactggaagagt
atcgtggagctggaccagctgtggatgcccaagtgtctgaggctcggctggtgcttaaac
ttctcccccacaccgttagagcagggcgtctggaagagacactacatccagactgtgcag
gagctgcgactcaccctgctgcagactgcctcgtcccagcagcaatttaccattccagat
gtaacaatgctcagcagtggacatgaagatctgttagagccggccctcctcacagaggag
cgtccactgtctgctacgcagcgagccggaagcagcctcaggaccagattaataaaagag
aagcagccgactgcaccgcctccatggagagattctgacagatatccanaagacacatta
cgctttaactacttggacaacctggaccccgtccaacaagccctgagggcgcaaatgaaa
agcacagcctccacctgccgcagtaacacattgaaaccagacggcgggagcaagaaaaca
ctgtctgaggcgaaatacaaacttcgcaaagccaaatctctgatgttcctcagttccaac
tgcagaccccaacatcctcctcctcctcctcctcctcctcctcctcatcatcatcatcat
catcagacccaaagtcgacctcagtgggcatcttgcagtaatggtgacaccatcaccaag
gagaccgccaggagcctgctgcgcctggcccagtggaatgccgggatctgtccagggccg
gtgagggcggcggtgccccagctgagcgcagaggcgctcagggcatcccggcgctcacac
cggagctctcccagtacgtaa
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